Microexon ID Pt_7:4662113-4662126:-
Species Populus   Trichocarpa
Coordinates 7:4662113..4662126
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAATAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAAGCTGAGCTTCGTAAGAAGGAATGGAGATACTTCGTCCACTACCTTGGTTGGAATAAAAATTGGGACGAATGGGTAGGCATGGACCGACTAATGAAACACACTCCG
Microexon-tag Amino Acid Seq KAELRKKEWRYFVHYLGWNKNWDEWVGMDRLMKHTP
Microexon-tag spanning region4660792-4662312
Microexon-tag prediction score0.9693
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.007G049300.7.v4.1x
Reference Transcript ID Potri.007G049300.7.v4.1
Gene ID Potri.007G049300.v4.1
Gene Name NA
Transcript ID Potri.007G049300.7.v4.1
Protein ID
Gene ID Potri.007G049300.v4.1
Gene Name
Pfam domain motif MSL3_chromo-like
Motif E-value 3.40E-15
Motif start 28
Motif end 94
Protein seq >Potri.007G049300.7.v4.1
MGSSSKDDSGSDAEASSGDKTPSNSSLFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYFVHYLGWNKNWDEWVGMDRLM
KHTPDNVLKQQALEKKQGVDKSLKPGRSSQTKPKNSTDSKMDKEDPKSNVAKGKKRKSDSGMEKDNLPVEKLVKIQIPST
LKKQLVDDWEFVTQQDKFVKLPRSPNVDDILTKYLEYMSKKDGMITDSIGEILKGIRCYFDKALPVMLLYKKERQQYHDT
VKIDVSPSTIYGAEHLLRLFVKLPELLAYVNIEEDTSTRLQQKLLDFLKFLHKNQSTFFLSAYDGSKVSEGKVKGKD*
CDS seq >Potri.007G049300.7.v4.1
ATGGGGAGCTCATCGAAGGACGATTCCGGCAGCGACGCCGAGGCTTCAAGCGGCGACAAAACACCTTCTAATTCCAGTCT
CTTCTCCGAAGGCGAGCGCGTCCTCGCCTACCACGGACCCCGCATCTACGAGGCCAAGGTTCAAAAAGCTGAGCTTCGTA
AGAAGGAATGGAGATACTTCGTCCACTACCTTGGTTGGAATAAAAATTGGGACGAATGGGTAGGCATGGACCGACTAATG
AAACACACTCCGGATAATGTCTTGAAGCAGCAGGCCCTAGAGAAAAAACAAGGTGTAGACAAGAGTTTGAAGCCTGGACG
TTCTTCTCAGACGAAGCCAAAAAACTCTACTGATTCAAAGATGGACAAGGAAGATCCTAAAAGCAATGTGGCAAAAGGGA
AGAAGCGTAAAAGTGATTCAGGAATGGAGAAGGATAATTTGCCTGTAGAAAAGCTTGTCAAGATCCAAATTCCATCAACA
CTAAAGAAGCAACTTGTTGATGATTGGGAATTTGTCACCCAGCAGGATAAGTTTGTTAAACTTCCCCGGTCACCAAATGT
GGATGATATTTTGACAAAGTACCTAGAATATATGTCGAAGAAGGATGGCATGATAACTGATTCCATTGGAGAAATTTTGA
AAGGCATACGGTGTTATTTTGACAAAGCATTGCCTGTGATGCTACTATACAAAAAAGAGCGTCAACAATATCATGATACT
GTCAAAATTGATGTATCTCCATCGACTATATATGGTGCTGAACATTTGCTGAGGCTCTTTGTTAAATTACCAGAGCTCTT
GGCCTATGTGAACATTGAAGAGGATACATCAACCCGCTTGCAACAGAAATTACTCGACTTTCTCAAATTTCTACATAAGA
ACCAAAGTACTTTCTTCCTTTCAGCTTATGATGGATCTAAAGTTTCTGAAGGCAAAGTCAAAGGGAAAGATTAG
Pt_7:4662113-4662126:- does not have available information here.