
Microexon ID | Pt_7:4662113-4662126:- |
Species | Populus Trichocarpa | Coordinates | 7:4662113..4662126 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAATAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAAGCTGAGCTTCGTAAGAAGGAATGGAGATACTTCGTCCACTACCTTGGTTGGAATAAAAATTGGGACGAATGGGTAGGCATGGACCGACTAATGAAACACACTCCG |
Microexon-tag Amino Acid Seq | KAELRKKEWRYFVHYLGWNKNWDEWVGMDRLMKHTP |
Microexon-tag spanning region | 4660792-4662312 |
Microexon-tag prediction score | 0.9693 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.007G049300.7.v4.1x |
Reference Transcript ID | Potri.007G049300.7.v4.1 |
Gene ID | Potri.007G049300.v4.1 |
Gene Name | NA |
Transcript ID | Potri.007G049300.7.v4.1 |
Protein ID | |
Gene ID | Potri.007G049300.v4.1 |
Gene Name | |
Pfam domain motif | MSL3_chromo-like |
Motif E-value | 3.40E-15 |
Motif start | 28 |
Motif end | 94 |
Protein seq | >Potri.007G049300.7.v4.1 MGSSSKDDSGSDAEASSGDKTPSNSSLFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYFVHYLGWNKNWDEWVGMDRLM KHTPDNVLKQQALEKKQGVDKSLKPGRSSQTKPKNSTDSKMDKEDPKSNVAKGKKRKSDSGMEKDNLPVEKLVKIQIPST LKKQLVDDWEFVTQQDKFVKLPRSPNVDDILTKYLEYMSKKDGMITDSIGEILKGIRCYFDKALPVMLLYKKERQQYHDT VKIDVSPSTIYGAEHLLRLFVKLPELLAYVNIEEDTSTRLQQKLLDFLKFLHKNQSTFFLSAYDGSKVSEGKVKGKD* |
CDS seq | >Potri.007G049300.7.v4.1 ATGGGGAGCTCATCGAAGGACGATTCCGGCAGCGACGCCGAGGCTTCAAGCGGCGACAAAACACCTTCTAATTCCAGTCT CTTCTCCGAAGGCGAGCGCGTCCTCGCCTACCACGGACCCCGCATCTACGAGGCCAAGGTTCAAAAAGCTGAGCTTCGTA AGAAGGAATGGAGATACTTCGTCCACTACCTTGGTTGGAATAAAAATTGGGACGAATGGGTAGGCATGGACCGACTAATG AAACACACTCCGGATAATGTCTTGAAGCAGCAGGCCCTAGAGAAAAAACAAGGTGTAGACAAGAGTTTGAAGCCTGGACG TTCTTCTCAGACGAAGCCAAAAAACTCTACTGATTCAAAGATGGACAAGGAAGATCCTAAAAGCAATGTGGCAAAAGGGA AGAAGCGTAAAAGTGATTCAGGAATGGAGAAGGATAATTTGCCTGTAGAAAAGCTTGTCAAGATCCAAATTCCATCAACA CTAAAGAAGCAACTTGTTGATGATTGGGAATTTGTCACCCAGCAGGATAAGTTTGTTAAACTTCCCCGGTCACCAAATGT GGATGATATTTTGACAAAGTACCTAGAATATATGTCGAAGAAGGATGGCATGATAACTGATTCCATTGGAGAAATTTTGA AAGGCATACGGTGTTATTTTGACAAAGCATTGCCTGTGATGCTACTATACAAAAAAGAGCGTCAACAATATCATGATACT GTCAAAATTGATGTATCTCCATCGACTATATATGGTGCTGAACATTTGCTGAGGCTCTTTGTTAAATTACCAGAGCTCTT GGCCTATGTGAACATTGAAGAGGATACATCAACCCGCTTGCAACAGAAATTACTCGACTTTCTCAAATTTCTACATAAGA ACCAAAGTACTTTCTTCCTTTCAGCTTATGATGGATCTAAAGTTTCTGAAGGCAAAGTCAAAGGGAAAGATTAG |
Pt_7:4662113-4662126:- does not have available information here.