
Microexon ID | Ps_NW_020622713.1:3156273-3156286:+ |
Species | Papaver somniferum | Coordinates | NW_020622713.1:3156273..3156286 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NW_020622713.1:3156273-3156286:+ does not have available information here.
Transcript ID | XM_026580320.1 |
Protein ID | XP_026436105.1 |
Gene ID | LOC113333962 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.6e-12 |
Motif start | 36 |
Motif end | 89 |
Protein seq | >XP_026436105.1 MGIPNPKAGGGGAIVNDSPSSTTKRHQTDPSPLSFSEGERVLAYHDPLIYEAKVITVEIKNPYDNTKEYLIHYKGWNKKW DEWVGVERLLKFTEENKKLQEELKLAQQHIEKNPKSGCLSNMNPESFTDAKMDQEDTRIHVRKGKRQTSDFRVKEELKLE QQDMEKDLKSGCLSNMKSESSADAKMDQDDTRKYAGKGKKRRSDFNVEDEPKLVQLRIEKNPNSGCLSNMIPESSTDAKM DQVDTRKYGGKGKKRTSDFSVEKQRRCDAAYENVKPLGFLNKKVIRTKIDSLLKVYGGDEGWAFIEEASYKLLIECLLEC QEQLDLNVEEENNQGILLPKEEEVQETDEQLLRKNSRRKIPRLSLVAGTSMQLLNMNPEEVNLGLRRSRREEK* |
CDS seq | >XM_026580320.1 ATGGGTATCCCTAACCCTAAAGCAGGAGGAGGAGGTGCTATTGTTAATGATTCTCCTTCAAGTACTACCAAGAGGCATCA AACAGACCCTTCTCCATTATCATTTTCTGAAGGCGAAAGGGTTCTTGCTTATCATGACCCTCTTATTTACGAAGCTAAGG TCATTACAGTTGAGATTAAGAATCCTTATGATAATACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGG GATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAAGAAAACAAGAAACTGCAGGAGGAACTTAAACTAGCGCA GCAGCATATCGAAAAGAATCCAAAATCAGGGTGTTTATCAAACATGAATCCAGAAAGTTTTACTGATGCAAAAATGGATC AAGAGGATACTAGAATACATGTAAGGAAGGGAAAGAGGCAAACAAGTGACTTCAGAGTTAAGGAGGAACTTAAACTAGAG CAGCAGGATATGGAAAAGGATCTCAAGTCAGGGTGTTTATCAAACATGAAGTCAGAAAGTTCTGCAGATGCAAAAATGGA TCAAGATGATACTAGAAAATATGCGGGGAAGGGAAAGAAGCGGAGAAGTGACTTCAACGTTGAGGATGAACCTAAGCTAG TGCAGCTGCGTATAGAAAAGAATCCCAATTCAGGGTGTTTATCAAACATGATTCCAGAAAGTTCTACTGATGCAAAAATG GATCAAGTGGATACTAGAAAATATGGGGGGAAGGGAAAAAAGCGTACTAGTGACTTCAGCGTCGAGAAACAAAGGCGATG TGATGCTGCATACGAGAATGTGAAGCCATTGGGGTTTCTAAACAAGAAAGTCATCCGAACAAAAATTGATTCCCTTTTGA AGGTTTATGGTGGAGATGAAGGATGGGCTTTCATTGAAGAAGCTTCTTATAAGTTACTGATCGAATGCCTTTTGGAATGT CAAGAGCAACTAGATCTAAATGTCGAAGAAGAAAACAATCAAGGGATACTGCTTCCAAAAGAAGAAGAAGTTCAAGAGAC TGATGAACAACTTCTGAGGAAGAATTCAAGAAGGAAAATTCCAAGGTTGTCCTTAGTTGCAGGGACATCAATGCAGTTGT TAAATATGAACCCAGAGGAAGTGAACCTAGGACTGAGGAGGTCAAGGAGAGAAGAGAAGTGA |
Microexon DNA seq | GGTTGGAATAAAAA |
Microexon Amino Acid seq | GWNKK |
Microexon-tag DNA Seq | ATTAAGAATCCTTATGATAATACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGGGATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAA |
Microexon-tag Amino Acid seq | IKNPYDNTKEYLIHYKGWNKKWDEWVGVERLLKFTE |
Transcript ID | XM_026580320.1 |
Gene ID | Ps.74891 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.6e-12 |
Motif start | 36 |
Motif end | 89 |
Protein seq | >XM_026580320.1 MGIPNPKAGGGGAIVNDSPSSTTKRHQTDPSPLSFSEGERVLAYHDPLIYEAKVITVEIKNPYDNTKEYLIHYKGWNKKW DEWVGVERLLKFTEENKKLQEELKLAQQHIEKNPKSGCLSNMNPESFTDAKMDQEDTRIHVRKGKRQTSDFRVKEELKLE QQDMEKDLKSGCLSNMKSESSADAKMDQDDTRKYAGKGKKRRSDFNVEDEPKLVQLRIEKNPNSGCLSNMIPESSTDAKM DQVDTRKYGGKGKKRTSDFSVEKQRRCDAAYENVKPLGFLNKKVIRTKIDSLLKVYGGDEGWAFIEEASYKLLIECLLEC QEQLDLNVEEENNQGILLPKEEEVQETDEQLLRKNSRRKIPRLSLVAGTSMQLLNMNPEEVNLGLRRSRREEK* |
CDS seq | >XM_026580320.1 ATGGGTATCCCTAACCCTAAAGCAGGAGGAGGAGGTGCTATTGTTAATGATTCTCCTTCAAGTACTACCAAGAGGCATCA AACAGACCCTTCTCCATTATCATTTTCTGAAGGCGAAAGGGTTCTTGCTTATCATGACCCTCTTATTTACGAAGCTAAGG TCATTACAGTTGAGATTAAGAATCCTTATGATAATACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGG GATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAAGAAAACAAGAAACTGCAGGAGGAACTTAAACTAGCGCA GCAGCATATCGAAAAGAATCCAAAATCAGGGTGTTTATCAAACATGAATCCAGAAAGTTTTACTGATGCAAAAATGGATC AAGAGGATACTAGAATACATGTAAGGAAGGGAAAGAGGCAAACAAGTGACTTCAGAGTTAAGGAGGAACTTAAACTAGAG CAGCAGGATATGGAAAAGGATCTCAAGTCAGGGTGTTTATCAAACATGAAGTCAGAAAGTTCTGCAGATGCAAAAATGGA TCAAGATGATACTAGAAAATATGCGGGGAAGGGAAAGAAGCGGAGAAGTGACTTCAACGTTGAGGATGAACCTAAGCTAG TGCAGCTGCGTATAGAAAAGAATCCCAATTCAGGGTGTTTATCAAACATGATTCCAGAAAGTTCTACTGATGCAAAAATG GATCAAGTGGATACTAGAAAATATGGGGGGAAGGGAAAAAAGCGTACTAGTGACTTCAGCGTCGAGAAACAAAGGCGATG TGATGCTGCATACGAGAATGTGAAGCCATTGGGGTTTCTAAACAAGAAAGTCATCCGAACAAAAATTGATTCCCTTTTGA AGGTTTATGGTGGAGATGAAGGATGGGCTTTCATTGAAGAAGCTTCTTATAAGTTACTGATCGAATGCCTTTTGGAATGT CAAGAGCAACTAGATCTAAATGTCGAAGAAGAAAACAATCAAGGGATACTGCTTCCAAAAGAAGAAGAAGTTCAAGAGAC TGATGAACAACTTCTGAGGAAGAATTCAAGAAGGAAAATTCCAAGGTTGTCCTTAGTTGCAGGGACATCAATGCAGTTGT TAAATATGAACCCAGAGGAAGTGAACCTAGGACTGAGGAGGTCAAGGAGAGAAGAGAAGTGA |