
Microexon ID | Ps_NW_020621603.1:7227215-7227228:+ |
Species | Papaver somniferum | Coordinates | NW_020621603.1:7227215..7227228 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAACAGAAA |
Microexon Amino Acid seq | GWNRN |
Microexon-tag DNA Seq | AAGATGCAGAAAGTTACGGAGGAAAAGAGATATTTTATCCATTACCTTGGTTGGAACAGAAACTGGGATGATTGGGTTGGCGCGGAACATTTGTTGAAATTCACTGAA |
Microexon-tag Amino Acid Seq | KMQKVTEEKRYFIHYLGWNRNWDDWVGAEHLLKFTE |
Microexon-tag spanning region | 7227010-7227705 |
Microexon-tag prediction score | 0.9055 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026578308.1x |
Reference Transcript ID | XM_026578308.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026578308.1 |
Protein ID | XP_026434093.1 |
Gene ID | LOC113331616 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 6.2e-11 |
Motif start | 41 |
Motif end | 92 |
Protein seq | >XP_026434093.1 MGCPKSGGVQQETDADVVGDYSANTSCEADPSSLGISEYIEGERVFAYHGPRIHDAKVLKVKMQKVTEEKRYFIHYLGWN RNWDDWVGAEHLLKFTEENKKLQEELKLKQQGTGKNPVSATRKHEVHEAKKGASKDGRTKRRKSSIASLAALSTPSSTNQ GVPLVSNELGSTAQSSGQSRRTVMFEQLVERDSLIGCGGYVLVYDFWVPPEHEAMYTEIVKNQGHIPSMEILPEMNTLVS LTRSLLQIADDMTKAEQVPPSAEKLKGWGKVIASAQRLNFNVNWMEVLLKEIETKVNARRAQLPSVIAKLRRNLVLLRVE AQAHAATQERLVAEVATKANVTNAAIVTNEKLLREAEEELAATQ* |
CDS seq | >XM_026578308.1 ATGGGTTGCCCTAAATCAGGAGGTGTTCAACAAGAAACAGACGCCGATGTTGTCGGTGATTATTCTGCGAATACTAGTTG TGAAGCAGATCCTTCTTCTTTAGGTATTTCTGAATATATTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTCGTATTC ACGATGCGAAGGTCCTAAAAGTTAAGATGCAGAAAGTTACGGAGGAAAAGAGATATTTTATCCATTACCTTGGTTGGAAC AGAAACTGGGATGATTGGGTTGGCGCGGAACATTTGTTGAAATTCACTGAAGAGAACAAGAAACTGCAAGAGGAGCTTAA ACTAAAACAGCAGGGTACAGGCAAGAATCCAGTTTCAGCTACGAGAAAGCATGAGGTTCATGAGGCTAAGAAAGGCGCCA GCAAAGATGGCAGGACTAAACGCCGCAAGAGTAGTATTGCCTCTCTAGCTGCTTTAAGTACTCCATCTAGTACCAATCAA GGTGTTCCTCTTGTCTCAAATGAGCTAGGTTCCACTGCTCAGTCCTCCGGTCAAAGCAGAAGGACTGTTATGTTTGAGCA GTTGGTTGAGCGTGATTCACTGATTGGTTGTGGCGGCTATGTGCTGGTGTACGATTTTTGGGTTCCTCCAGAACATGAGG CCATGTACACGGAGATTGTGAAAAACCAGGGTCACATTCCTAGTATGGAAATCCTTCCCGAGATGAACACATTGGTTTCT TTGACTCGCAGCCTGTTGCAAATTGCCGATGATATGACTAAAGCTGAGCAAGTTCCTCCTTCAGCGGAGAAGTTAAAAGG GTGGGGTAAGGTAATAGCTTCCGCTCAACGTCTGAACTTCAATGTTAATTGGATGGAAGTTCTTTTGAAGGAAATTGAGA CCAAGGTAAATGCTCGGCGGGCGCAACTTCCAAGCGTTATTGCTAAGCTGCGAAGGAATCTGGTCCTACTGCGGGTAGAA GCCCAGGCACATGCAGCTACTCAGGAACGGCTTGTAGCTGAAGTTGCAACTAAAGCTAATGTGACTAATGCTGCAATTGT TACCAATGAAAAGCTACTTCGTGAAGCAGAGGAAGAACTTGCAGCTACCCAATGA |
Microexon DNA seq | GGTTGGAACAGAAA |
Microexon Amino Acid seq | GWNRN |
Microexon-tag DNA Seq | AAGATGCAGAAAGTTACGGAGGAAAAGAGATATTTTATCCATTACCTTGGTTGGAACAGAAACTGGGATGATTGGGTTGGCGCGGAACATTTGTTGAAATTCACTGAA |
Microexon-tag Amino Acid seq | KMQKVTEEKRYFIHYLGWNRNWDDWVGAEHLLKFTE |
Transcript ID | XM_026578308.1 |
Gene ID | LOC113331616 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 6.2e-11 |
Motif start | 41 |
Motif end | 92 |
Protein seq | >XM_026578308.1 MGCPKSGGVQQETDADVVGDYSANTSCEADPSSLGISEYIEGERVFAYHGPRIHDAKVLKVKMQKVTEEKRYFIHYLGWN RNWDDWVGAEHLLKFTEENKKLQEELKLKQQGTGKNPVSATRKHEVHEAKKGASKDGRTKRRKSSIASLAALSTPSSTNQ GVPLVSNELGSTAQSSGQSRRTVMFEQLVERDSLIGCGGYVLVYDFWVPPEHEAMYTEIVKNQGHIPSMEILPEMNTLVS LTRSLLQIADDMTKAEQVPPSAEKLKGWGKVIASAQRLNFNVNWMEVLLKEIETKVNARRAQLPSVIAKLRRNLVLLRVE AQAHAATQERLVAEVATKANVTNAAIVTNEKLLREAEEELAATQ* |
CDS seq | >XM_026578308.1 ATGGGTTGCCCTAAATCAGGAGGTGTTCAACAAGAAACAGACGCCGATGTTGTCGGTGATTATTCTGCGAATACTAGTTG TGAAGCAGATCCTTCTTCTTTAGGTATTTCTGAATATATTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTCGTATTC ACGATGCGAAGGTCCTAAAAGTTAAGATGCAGAAAGTTACGGAGGAAAAGAGATATTTTATCCATTACCTTGGTTGGAAC AGAAACTGGGATGATTGGGTTGGCGCGGAACATTTGTTGAAATTCACTGAAGAGAACAAGAAACTGCAAGAGGAGCTTAA ACTAAAACAGCAGGGTACAGGCAAGAATCCAGTTTCAGCTACGAGAAAGCATGAGGTTCATGAGGCTAAGAAAGGCGCCA GCAAAGATGGCAGGACTAAACGCCGCAAGAGTAGTATTGCCTCTCTAGCTGCTTTAAGTACTCCATCTAGTACCAATCAA GGTGTTCCTCTTGTCTCAAATGAGCTAGGTTCCACTGCTCAGTCCTCCGGTCAAAGCAGAAGGACTGTTATGTTTGAGCA GTTGGTTGAGCGTGATTCACTGATTGGTTGTGGCGGCTATGTGCTGGTGTACGATTTTTGGGTTCCTCCAGAACATGAGG CCATGTACACGGAGATTGTGAAAAACCAGGGTCACATTCCTAGTATGGAAATCCTTCCCGAGATGAACACATTGGTTTCT TTGACTCGCAGCCTGTTGCAAATTGCCGATGATATGACTAAAGCTGAGCAAGTTCCTCCTTCAGCGGAGAAGTTAAAAGG GTGGGGTAAGGTAATAGCTTCCGCTCAACGTCTGAACTTCAATGTTAATTGGATGGAAGTTCTTTTGAAGGAAATTGAGA CCAAGGTAAATGCTCGGCGGGCGCAACTTCCAAGCGTTATTGCTAAGCTGCGAAGGAATCTGGTCCTACTGCGGGTAGAA GCCCAGGCACATGCAGCTACTCAGGAACGGCTTGTAGCTGAAGTTGCAACTAAAGCTAATGTGACTAATGCTGCAATTGT TACCAATGAAAAGCTACTTCGTGAAGCAGAGGAAGAACTTGCAGCTACCCAATGA |