
Microexon ID | Ps_NC_039367.1:34332264-34332277:- |
Species | Papaver somniferum | Coordinates | NC_039367.1:34332264..34332277 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NC_039367.1:34332264-34332277:- does not have available information here.
Transcript ID | XM_026567717.1 |
Protein ID | XP_026423502.1 |
Gene ID | LOC113319469 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.4e-11 |
Motif start | 37 |
Motif end | 89 |
Protein seq | >XP_026423502.1 MGIPNPKAGGGGGIVNDSPSNTIKRHQTDPSPLSFFEGERILAYHDPLIYEAKVVTVEIKNPYDNTKEYLIHYKGWNKKW DEWVGVERLLKFTEENKKLQEELKLAQQHIEKNPKSGCLSNMNPESFTDAKMDQEDTRIYARKGKRQTSDFRVKEELKLE QQDTEKDLKSGCLSNMKSESSADAKMDQDDTRKYVGKGKKRRSDLSVEDELKLVQLRMEKNPNSGCSSNMNPKSSTDAKM DQVDTRMAGSTTTSSIEYRREYVGKGKKRTSDFSVEKQRRYDAAYENVKPLGFLNKKVIRTKIDSLLKVYGGDEGWAFIE EASYKLLIECLLECQEQLDLVVKEEENQGILFPEEEKVQETDEQLLRKNSRRKIPRLSSVAGISSAVVKYEPRGSEPRTE EVKERIEAIKCSCYLLPAAKKQRLQETLGNGNRKLVSAEVQKLQENLSGSVLGTSQRRRKRPPFGYIDSMEDCEEDYVFF NTKL* |
CDS seq | >XM_026567717.1 ATGGGTATCCCTAACCCTAAAGCAGGAGGAGGAGGTGGTATCGTTAACGATTCTCCTTCAAATACTATTAAGAGGCATCA AACAGACCCTTCTCCATTATCATTTTTTGAAGGCGAAAGGATTCTTGCTTATCATGATCCACTTATTTACGAAGCTAAGG TCGTTACAGTTGAGATTAAGAATCCTTATGATAACACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGG GATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAAGAAAACAAGAAACTGCAGGAGGAACTTAAACTAGCGCA GCAGCATATCGAAAAGAATCCGAAATCAGGGTGTTTATCAAACATGAATCCAGAAAGTTTTACTGATGCAAAAATGGATC AAGAGGATACTAGAATATATGCAAGGAAGGGAAAGAGGCAAACAAGTGACTTCAGAGTTAAGGAGGAACTTAAACTAGAG CAGCAGGATACGGAAAAGGATCTCAAGTCAGGGTGTTTATCAAACATGAAGTCAGAAAGTTCCGCAGATGCGAAAATGGA TCAAGATGATACTAGAAAATATGTGGGGAAGGGAAAGAAGCGGAGAAGTGACTTAAGCGTTGAGGATGAACTTAAGCTAG TGCAGCTGCGTATGGAAAAGAATCCCAATTCAGGGTGTTCATCAAACATGAATCCAAAAAGTTCTACTGATGCAAAAATG GATCAAGTGGATACTAGAATGGCTGGATCTACCACGACCTCGTCCATTGAGTATAGGAGAGAATATGTGGGGAAGGGAAA AAAGCGTACTAGTGACTTCAGCGTTGAGAAACAAAGGCGATATGATGCTGCATACGAGAATGTGAAGCCATTGGGGTTTC TAAACAAGAAAGTCATCCGGACAAAAATTGATTCCCTTTTGAAGGTTTATGGTGGAGATGAAGGATGGGCTTTCATTGAA GAAGCTTCGTATAAGTTACTGATTGAATGCCTTTTGGAATGTCAAGAGCAACTAGATCTAGTTGTCAAAGAAGAAGAAAA TCAAGGGATACTGTTTCCAGAAGAAGAAAAAGTTCAAGAGACTGATGAACAACTTCTGAGGAAGAATTCAAGAAGGAAAA TTCCAAGGTTGTCCTCAGTTGCAGGGATATCAAGTGCAGTTGTTAAATATGAACCCAGAGGAAGTGAACCTAGGACTGAG GAGGTCAAGGAGAGAATAGAAGCTATCAAGTGCAGTTGTTATCTTTTGCCCGCTGCAAAAAAACAGAGGTTGCAAGAAAC ACTTGGAAATGGCAATCGGAAGTTGGTTTCTGCTGAAGTACAGAAGTTGCAAGAAAATCTTTCTGGGTCTGTGCTAGGTA CTTCTCAACGCCGTAGGAAGAGGCCCCCATTTGGTTATATTGACAGTATGGAAGACTGCGAAGAGGACTATGTTTTCTTT AACACGAAACTCTAA |
Microexon DNA seq | GGTTGGAATAAAAA |
Microexon Amino Acid seq | GWNKK |
Microexon-tag DNA Seq | ATTAAGAATCCTTATGATAACACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGGGATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAA |
Microexon-tag Amino Acid seq | IKNPYDNTKEYLIHYKGWNKKWDEWVGVERLLKFTE |
Transcript ID | XM_026567717.1 |
Gene ID | Ps.60331 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.4e-11 |
Motif start | 37 |
Motif end | 89 |
Protein seq | >XM_026567717.1 MGIPNPKAGGGGGIVNDSPSNTIKRHQTDPSPLSFFEGERILAYHDPLIYEAKVVTVEIKNPYDNTKEYLIHYKGWNKKW DEWVGVERLLKFTEENKKLQEELKLAQQHIEKNPKSGCLSNMNPESFTDAKMDQEDTRIYARKGKRQTSDFRVKEELKLE QQDTEKDLKSGCLSNMKSESSADAKMDQDDTRKYVGKGKKRRSDLSVEDELKLVQLRMEKNPNSGCSSNMNPKSSTDAKM DQVDTRMAGSTTTSSIEYRREYVGKGKKRTSDFSVEKQRRYDAAYENVKPLGFLNKKVIRTKIDSLLKVYGGDEGWAFIE EASYKLLIECLLECQEQLDLVVKEEENQGILFPEEEKVQETDEQLLRKNSRRKIPRLSSVAGISSAVVKYEPRGSEPRTE EVKERIEAIKCSCYLLPAAKKQRLQETLGNGNRKLVSAEVQKLQENLSGSVLGTSQRRRKRPPFGYIDSMEDCEEDYVFF NTKL* |
CDS seq | >XM_026567717.1 ATGGGTATCCCTAACCCTAAAGCAGGAGGAGGAGGTGGTATCGTTAACGATTCTCCTTCAAATACTATTAAGAGGCATCA AACAGACCCTTCTCCATTATCATTTTTTGAAGGCGAAAGGATTCTTGCTTATCATGATCCACTTATTTACGAAGCTAAGG TCGTTACAGTTGAGATTAAGAATCCTTATGATAACACAAAGGAGTACTTAATTCATTACAAAGGTTGGAATAAAAAATGG GATGAGTGGGTAGGCGTTGAACGTTTGTTGAAATTCACTGAAGAAAACAAGAAACTGCAGGAGGAACTTAAACTAGCGCA GCAGCATATCGAAAAGAATCCGAAATCAGGGTGTTTATCAAACATGAATCCAGAAAGTTTTACTGATGCAAAAATGGATC AAGAGGATACTAGAATATATGCAAGGAAGGGAAAGAGGCAAACAAGTGACTTCAGAGTTAAGGAGGAACTTAAACTAGAG CAGCAGGATACGGAAAAGGATCTCAAGTCAGGGTGTTTATCAAACATGAAGTCAGAAAGTTCCGCAGATGCGAAAATGGA TCAAGATGATACTAGAAAATATGTGGGGAAGGGAAAGAAGCGGAGAAGTGACTTAAGCGTTGAGGATGAACTTAAGCTAG TGCAGCTGCGTATGGAAAAGAATCCCAATTCAGGGTGTTCATCAAACATGAATCCAAAAAGTTCTACTGATGCAAAAATG GATCAAGTGGATACTAGAATGGCTGGATCTACCACGACCTCGTCCATTGAGTATAGGAGAGAATATGTGGGGAAGGGAAA AAAGCGTACTAGTGACTTCAGCGTTGAGAAACAAAGGCGATATGATGCTGCATACGAGAATGTGAAGCCATTGGGGTTTC TAAACAAGAAAGTCATCCGGACAAAAATTGATTCCCTTTTGAAGGTTTATGGTGGAGATGAAGGATGGGCTTTCATTGAA GAAGCTTCGTATAAGTTACTGATTGAATGCCTTTTGGAATGTCAAGAGCAACTAGATCTAGTTGTCAAAGAAGAAGAAAA TCAAGGGATACTGTTTCCAGAAGAAGAAAAAGTTCAAGAGACTGATGAACAACTTCTGAGGAAGAATTCAAGAAGGAAAA TTCCAAGGTTGTCCTCAGTTGCAGGGATATCAAGTGCAGTTGTTAAATATGAACCCAGAGGAAGTGAACCTAGGACTGAG GAGGTCAAGGAGAGAATAGAAGCTATCAAGTGCAGTTGTTATCTTTTGCCCGCTGCAAAAAAACAGAGGTTGCAAGAAAC ACTTGGAAATGGCAATCGGAAGTTGGTTTCTGCTGAAGTACAGAAGTTGCAAGAAAATCTTTCTGGGTCTGTGCTAGGTA CTTCTCAACGCCGTAGGAAGAGGCCCCCATTTGGTTATATTGACAGTATGGAAGACTGCGAAGAGGACTATGTTTTCTTT AACACGAAACTCTAA |