
Microexon ID | Ps_NC_039360.1:97678854-97678867:- |
Species | Papaver somniferum | Coordinates | NC_039360.1:97678854..97678867 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | CGGAAAGTTGATACTACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG |
Microexon-tag Amino Acid Seq | RKVDTTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE |
Microexon-tag spanning region | 97678378-97679063 |
Microexon-tag prediction score | 0.918 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026600157.1x |
Reference Transcript ID | XM_026600157.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026600157.1 |
Protein ID | XP_026455942.1 |
Gene ID | LOC113356920 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.3e-09 |
Motif start | 43 |
Motif end | 96 |
Protein seq | >XP_026455942.1 MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDTTEEKRYFVHY LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSADAKMDKEDTRNYVGKGKKRKSDFSI EEKDTISNEKLVKIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRYLDYKLKKEGMIGESVGEILKGLRCYFD KALPVMLLYKMERQQYQEAIKDDVSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLS AYDNPKGGVAEGSGEDSLEGDDN* |
CDS seq | >XM_026600157.1 ATGGGTAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG TGAAGCAGATCCTTCTTCTTCTTCTTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCCC GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATACTACGGAGGAAAAGAGATACTTTGTTCATTAC CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA GGAGGACCTTAAACTAAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGTTCATCACACATGAAGCCAAAAAGCT CTGCTGATGCAAAAATGGATAAAGAGGATACTAGAAACTATGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATT GAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTGAAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGA TTGGGAGTTTGTAGTTCAGCTCGGCAAGCTTGTTAAGCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGTACC TTGATTACAAATTAAAGAAGGAAGGCATGATAGGCGAATCGGTTGGGGAAATCTTGAAGGGTTTGCGCTGTTACTTTGAC AAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAACGCCAACAGTATCAAGAAGCAATTAAAGACGATGTTTCTCCATC TAGTGTATATGGCGCTGAGCATTTACTACGCCTATTTGTGAAGTTGCCTGAGCTACTGTCTTATGCAAACATTGAAGAGG AAGCGTCAACGCGGTTACATACTAAACTAATCGACTTACTCAAATTCTTGCAGAAAAATCAGAGCACCTTCTTTCTTTCT GCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGAAGCGGTGAGGACAGTTTAGAAGGTGACGACAACTGA |
Microexon DNA seq | GGCTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | CGGAAAGTTGATACTACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG |
Microexon-tag Amino Acid seq | RKVDTTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE |
Transcript ID | Ps.18500.1 |
Gene ID | Ps.18500 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.2e-09 |
Motif start | 43 |
Motif end | 96 |
Protein seq | >Ps.18500.1 MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDTTEEKRYFVHY LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSAVGKGKKRKSDFSIEEKDTISNEKLV KIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRIGESVGEILKGLRCYFDKALPVMLLYKMERQQYQEAIKDD VSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLSAYDNPKGGVAEGSGEDSLEGDDN * |
CDS seq | >Ps.18500.1 ATGGGTAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG TGAAGCAGATCCTTCTTCTTCTTCTTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCCC GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATACTACGGAGGAAAAGAGATACTTTGTTCATTAC CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA GGAGGACCTTAAACTAAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGTTCATCACACATGAAGCCAAAAAGCT CTGCTGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATTGAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTG AAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGATTGGGAGTTTGTAGTTCAGCTCGGCAAGCTTGTTAA GCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGATAGGCGAATCGGTTGGGGAAATCTTGAAGGGTTTGCGCT GTTACTTTGACAAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAACGCCAACAGTATCAAGAAGCAATTAAAGACGAT GTTTCTCCATCTAGTGTATATGGCGCTGAGCATTTACTACGCCTATTTGTGAAGTTGCCTGAGCTACTGTCTTATGCAAA CATTGAAGAGGAAGCGTCAACGCGGTTACATACTAAACTAATCGACTTACTCAAATTCTTGCAGAAAAATCAGAGCACCT TCTTTCTTTCTGCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGAAGCGGTGAGGACAGTTTAGAAGGTGACGACAAC TGA |