Microexon ID Ps_NC_039359.1:4808511-4808524:-
Species Papaver somniferum
Coordinates NC_039359.1:4808511..4808524
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq CGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG
Microexon-tag Amino Acid Seq RKVDNTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE
Microexon-tag spanning region4808036-4808737
Microexon-tag prediction score0.9237
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026590216.1x
Reference Transcript ID XM_026590216.1
Gene ID NA
Gene Name NA
Transcript ID XM_026590216.1
Protein ID XP_026446001.1
Gene ID LOC113346723
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.5e-09
Motif start 43
Motif end 96
Protein seq >XP_026446001.1
MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDNTEEKRYFVHY
LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSADAKMDKEDTRNYVGKGKKRKSDFSI
EEKDTISNEKLVKIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRYLDYKLKKEGMIGESVGEILKGLRCYFD
KALPVMLLYKMERQQYQEAIKDDVSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLS
AYDNPKGGVAEGSGKDGLEGDDN*
CDS seq >XM_026590216.1
ATGGGCAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG
CGAAGCAGATCCTTCTTCTTCTTCCTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTC
GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTAC
CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA
GGAGGACCTTAAACTTAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGCTCATCACACATGAAGCCAAAAAGCT
CTGCTGATGCAAAAATGGATAAAGAGGATACTAGAAACTATGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATT
GAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTGAAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGA
TTGGGAATTTGTAGTTCAGCTCGGCAAGCTTGTTAAGCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGTACC
TTGATTACAAATTAAAGAAGGAAGGCATGATAGGCGAATCAGTTGGGGAGATCTTGAAGGGTTTGCGCTGTTACTTTGAC
AAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAACGCCAACAGTATCAAGAAGCAATTAAAGACGATGTTTCTCCATC
TAGTGTATATGGCGCTGAGCATTTACTACGCTTATTTGTGAAGTTGCCTGAGCTACTGTCTTATGCAAACATTGAAGAGG
AAGCGTCAACACGGTTACATACGAAACTAATCGACTTACTCAAATTCTTGCAGAAAAATCAGAGCACCTTCTTTCTTTCT
GCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGAAGCGGTAAGGACGGTTTAGAAGGTGACGACAACTGA
Microexon DNA seq GGCTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq CGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG
Microexon-tag Amino Acid seq RKVDNTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE
Transcript ID XM_026590218.1
Gene ID Ps.8402
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.4e-09
Motif start 43
Motif end 96
Protein seq >XM_026590218.1
MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDNTEEKRYFVHY
LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSAVGKGKKRKSDFSIEEKDTISNEKLV
KIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRYLDYKLKKEGMIGESVGEILKGLRCYFDKALPVMLLYKME
RQQYQEAIKDDVSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLSAYDNPKGGVAEG
SGKDGLEGDDN*
CDS seq >XM_026590218.1
ATGGGCAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG
CGAAGCAGATCCTTCTTCTTCTTCCTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTC
GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTAC
CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA
GGAGGACCTTAAACTTAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGCTCATCACACATGAAGCCAAAAAGCT
CTGCTGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATTGAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTG
AAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGATTGGGAATTTGTAGTTCAGCTCGGCAAGCTTGTTAA
GCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGTACCTTGATTACAAATTAAAGAAGGAAGGCATGATAGGCG
AATCAGTTGGGGAGATCTTGAAGGGTTTGCGCTGTTACTTTGACAAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAA
CGCCAACAGTATCAAGAAGCAATTAAAGACGATGTTTCTCCATCTAGTGTATATGGCGCTGAGCATTTACTACGCTTATT
TGTGAAGTTGCCTGAGCTACTGTCTTATGCAAACATTGAAGAGGAAGCGTCAACACGGTTACATACGAAACTAATCGACT
TACTCAAATTCTTGCAGAAAAATCAGAGCACCTTCTTTCTTTCTGCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGA
AGCGGTAAGGACGGTTTAGAAGGTGACGACAACTGA