
Microexon ID | Ps_NC_039359.1:4808511-4808524:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:4808511..4808524 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | CGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG |
Microexon-tag Amino Acid Seq | RKVDNTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE |
Microexon-tag spanning region | 4808036-4808737 |
Microexon-tag prediction score | 0.9237 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026590216.1x |
Reference Transcript ID | XM_026590216.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026590216.1 |
Protein ID | XP_026446001.1 |
Gene ID | LOC113346723 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.5e-09 |
Motif start | 43 |
Motif end | 96 |
Protein seq | >XP_026446001.1 MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDNTEEKRYFVHY LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSADAKMDKEDTRNYVGKGKKRKSDFSI EEKDTISNEKLVKIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRYLDYKLKKEGMIGESVGEILKGLRCYFD KALPVMLLYKMERQQYQEAIKDDVSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLS AYDNPKGGVAEGSGKDGLEGDDN* |
CDS seq | >XM_026590216.1 ATGGGCAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG CGAAGCAGATCCTTCTTCTTCTTCCTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTC GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTAC CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA GGAGGACCTTAAACTTAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGCTCATCACACATGAAGCCAAAAAGCT CTGCTGATGCAAAAATGGATAAAGAGGATACTAGAAACTATGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATT GAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTGAAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGA TTGGGAATTTGTAGTTCAGCTCGGCAAGCTTGTTAAGCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGTACC TTGATTACAAATTAAAGAAGGAAGGCATGATAGGCGAATCAGTTGGGGAGATCTTGAAGGGTTTGCGCTGTTACTTTGAC AAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAACGCCAACAGTATCAAGAAGCAATTAAAGACGATGTTTCTCCATC TAGTGTATATGGCGCTGAGCATTTACTACGCTTATTTGTGAAGTTGCCTGAGCTACTGTCTTATGCAAACATTGAAGAGG AAGCGTCAACACGGTTACATACGAAACTAATCGACTTACTCAAATTCTTGCAGAAAAATCAGAGCACCTTCTTTCTTTCT GCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGAAGCGGTAAGGACGGTTTAGAAGGTGACGACAACTGA |
Microexon DNA seq | GGCTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | CGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTACCTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAG |
Microexon-tag Amino Acid seq | RKVDNTEEKRYFVHYLGWNKNWDEWVGPERLLKFTE |
Transcript ID | XM_026590218.1 |
Gene ID | Ps.8402 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.4e-09 |
Motif start | 43 |
Motif end | 96 |
Protein seq | >XM_026590218.1 MGSPKSGGAKEDTDVDIVGDSPSNSSGEADPSSSSLGISAYTEGERVFAYHGPRIYESKVQKVEMRKVDNTEEKRYFVHY LGWNKNWDEWVGPERLLKFTEENKKLQEDLKLKQQGTDKNPKSGRSSHMKPKSSAVGKGKKRKSDFSIEEKDTISNEKLV KIQIPSTLKKQLVDDWEFVVQLGKLVKLPRSPCVDDIMKRYLDYKLKKEGMIGESVGEILKGLRCYFDKALPVMLLYKME RQQYQEAIKDDVSPSSVYGAEHLLRLFVKLPELLSYANIEEEASTRLHTKLIDLLKFLQKNQSTFFLSAYDNPKGGVAEG SGKDGLEGDDN* |
CDS seq | >XM_026590218.1 ATGGGCAGCCCTAAATCAGGAGGTGCTAAAGAAGACACAGACGTCGATATTGTTGGTGATTCTCCTTCAAATTCTAGTGG CGAAGCAGATCCTTCTTCTTCTTCCTTAGGTATTTCTGCATATACTGAAGGTGAAAGAGTTTTTGCTTATCACGGTCCTC GTATTTACGAGTCTAAGGTTCAAAAAGTTGAGATGCGGAAAGTTGATAATACGGAGGAAAAGAGATACTTTGTTCATTAC CTTGGCTGGAACAAAAACTGGGATGAATGGGTTGGCCCGGAACGTTTGTTGAAATTCACTGAGGAGAACAAGAAACTGCA GGAGGACCTTAAACTTAAACAGCAGGGTACAGACAAGAATCCCAAATCAGGGCGCTCATCACACATGAAGCCAAAAAGCT CTGCTGTTGGGAAGGGAAAGAAGCGGAAAAGTGACTTCAGTATTGAGGAGAAGGACACCATTTCCAATGAGAAGCTTGTG AAGATCCAAATTCCATCAACACTTAAAAAACAACTGGTTGATGATTGGGAATTTGTAGTTCAGCTCGGCAAGCTTGTTAA GCTTCCGCGCTCTCCTTGTGTGGATGATATAATGAAGAGGTACCTTGATTACAAATTAAAGAAGGAAGGCATGATAGGCG AATCAGTTGGGGAGATCTTGAAGGGTTTGCGCTGTTACTTTGACAAAGCATTGCCAGTCATGCTCTTGTACAAAATGGAA CGCCAACAGTATCAAGAAGCAATTAAAGACGATGTTTCTCCATCTAGTGTATATGGCGCTGAGCATTTACTACGCTTATT TGTGAAGTTGCCTGAGCTACTGTCTTATGCAAACATTGAAGAGGAAGCGTCAACACGGTTACATACGAAACTAATCGACT TACTCAAATTCTTGCAGAAAAATCAGAGCACCTTCTTTCTTTCTGCATATGATAATCCTAAAGGTGGAGTAGCAGAAGGA AGCGGTAAGGACGGTTTAGAAGGTGACGACAACTGA |