Microexon ID Os_11:20105804-20105817:-
Species Oryza sativa
Coordinates 11:20105804..20105817
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAATAAGAG
Microexon Amino Acid seq GWNKS
Microexon-tag DNA Seq AAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTTGGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGAC
Microexon-tag Amino Acid Seq KSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTD
Microexon-tag spanning region20104752-20105988
Microexon-tag prediction score0.9079
Overlapped with the annotated transcript (%) 100
New Transcript ID Os11t0545600-01x
Reference Transcript ID Os11t0545600-01
Gene ID Os11g0545600
Gene Name MRG702
Transcript ID Os11t0545600-01
Protein ID Os11t0545600-01
Gene ID Os11g0545600
Gene Name MRG702
Pfam domain motif Tudor-knot
Motif E-value 2.8e-10
Motif start 17
Motif end 67
Protein seq >Os11t0545600-01
MSQAGSESAAAKEPSFKEGERVLAYHGPLLYEAKVQKSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTDENIRKQQE
LEKSQVVDKSVKSGRSAQHKPKGSNDAKTDKEDTKIIIKGKKRKSQPGGTEEKERKSSESLFMSHFPSTLKKQLVDDWEF
VTQLGKLVKLPRSPTVDDILKKYLEHRTKKDNKINDSYAEILKGLRCYFDKALPAMLLYKKERQQYSEEVKGDVSPSTIY
GAEHLLRLFVKLPELLASVNMEEDALNKLQQKLLDILKFLQKNQSSFFLSAYDGGSKGTDGIKTK*
CDS seq >Os11t0545600-01
ATGTCCCAAGCTGGATCGGAATCCGCCGCTGCCAAGGAGCCGTCGTTCAAGGAGGGCGAGAGAGTGCTCGCCTACCACGG
CCCGCTCCTCTACGAGGCCAAGGTTCAAAAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTT
GGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGACGAAAATATCCGCAAACAACAAGAG
CTTGAAAAGAGCCAAGTAGTTGACAAAAGCGTAAAATCTGGACGGTCAGCGCAGCATAAGCCAAAAGGCTCTAATGATGC
AAAAACTGATAAAGAAGACACCAAGATTATTATCAAGGGGAAGAAACGCAAAAGTCAGCCTGGTGGGACTGAGGAGAAAG
AAAGAAAATCATCTGAGAGTCTCTTCATGTCACATTTTCCTTCAACGCTAAAAAAGCAACTTGTTGATGATTGGGAGTTT
GTCACGCAGCTGGGTAAGCTTGTGAAGCTACCTCGGTCCCCCACGGTCGATGATATTCTAAAGAAGTACTTGGAGCACCG
GACAAAGAAGGATAACAAGATAAATGACTCTTACGCTGAGATTTTGAAAGGATTGCGATGCTACTTTGATAAAGCATTGC
CTGCAATGCTTTTGTATAAGAAAGAGCGACAGCAGTACTCTGAAGAGGTTAAAGGCGATGTTTCGCCCTCAACTATATAT
GGAGCTGAGCATCTACTGCGCCTTTTTGTGAAATTGCCGGAGCTACTTGCGTCTGTCAACATGGAAGAAGATGCACTCAA
CAAACTACAGCAGAAATTGCTGGACATTCTCAAGTTTCTGCAGAAGAATCAGAGTTCGTTCTTCCTTTCTGCGTATGATG
GTGGTTCTAAAGGTACTGATGGGATAAAGACCAAATAG
Microexon DNA seq GGTTGGAATAAGAG
Microexon Amino Acid seq GWNKS
Microexon-tag DNA Seq AAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTTGGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGAC
Microexon-tag Amino Acid seq KSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTD
Transcript ID Os.9270.1
Gene ID Os.9270
Gene Name MRG702
Pfam domain motif Tudor-knot
Motif E-value 2.8e-10
Motif start 17
Motif end 67
Protein seq >Os.9270.1
MSQAGSESAAAKEPSFKEGERVLAYHGPLLYEAKVQKSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTDENIRKQQE
LEKSQVVDKSVKSGRSAQHKPKGSNADAKTDKEDTKIIIKGKKRKSQPGGTEEKERKSSESLFMSHFPSTLKKQLVDDWE
FVTQLGKLVKLPRSPTVDDILKKYLEHRTKKDNKINDSYAEILKGLRCYFDKALPAMLLYKKERQQYSEEVKGDVSPSTI
YGAEHLLRLFVKLPELLASVNMEEDALNKLQQKLLDILKFLQKNQSSFFLSAYDGGSKGTDGIKTK*
CDS seq >Os.9270.1
ATGTCCCAAGCTGGATCGGAATCCGCCGCTGCCAAGGAGCCGTCGTTCAAGGAGGGCGAGAGAGTGCTCGCCTACCACGG
CCCGCTCCTCTACGAGGCCAAGGTTCAAAAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTT
GGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGACGAAAATATCCGCAAACAACAAGAG
CTTGAAAAGAGCCAAGTAGTTGACAAAAGCGTAAAATCTGGACGGTCAGCGCAGCATAAGCCAAAAGGCTCTAATGCAGA
TGCAAAAACTGATAAAGAAGACACCAAGATTATTATCAAGGGGAAGAAACGCAAAAGTCAGCCTGGTGGGACTGAGGAGA
AAGAAAGAAAATCATCTGAGAGTCTCTTCATGTCACATTTTCCTTCAACGCTAAAAAAGCAACTTGTTGATGATTGGGAG
TTTGTCACGCAGCTGGGTAAGCTTGTGAAGCTACCTCGGTCCCCCACGGTCGATGATATTCTAAAGAAGTACTTGGAGCA
CCGGACAAAGAAGGATAACAAGATAAATGACTCTTACGCTGAGATTTTGAAAGGATTGCGATGCTACTTTGATAAAGCAT
TGCCTGCAATGCTTTTGTATAAGAAAGAGCGACAGCAGTACTCTGAAGAGGTTAAAGGCGATGTTTCGCCCTCAACTATA
TATGGAGCTGAGCATCTACTGCGCCTTTTTGTGAAATTGCCGGAGCTACTTGCGTCTGTCAACATGGAAGAAGATGCACT
CAACAAACTACAGCAGAAATTGCTGGACATTCTCAAGTTTCTGCAGAAGAATCAGAGTTCGTTCTTCCTTTCTGCGTATG
ATGGTGGTTCTAAAGGTACTGATGGGATAAAGACCAAATAG