
Microexon ID | Os_11:20105804-20105817:- |
Species | Oryza sativa | Coordinates | 11:20105804..20105817 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAATAAGAG |
Microexon Amino Acid seq | GWNKS |
Microexon-tag DNA Seq | AAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTTGGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGAC |
Microexon-tag Amino Acid Seq | KSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTD |
Microexon-tag spanning region | 20104752-20105988 |
Microexon-tag prediction score | 0.9079 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os11t0545600-01x |
Reference Transcript ID | Os11t0545600-01 |
Gene ID | Os11g0545600 |
Gene Name | MRG702 |
Transcript ID | Os11t0545600-01 |
Protein ID | Os11t0545600-01 |
Gene ID | Os11g0545600 |
Gene Name | MRG702 |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.8e-10 |
Motif start | 17 |
Motif end | 67 |
Protein seq | >Os11t0545600-01 MSQAGSESAAAKEPSFKEGERVLAYHGPLLYEAKVQKSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTDENIRKQQE LEKSQVVDKSVKSGRSAQHKPKGSNDAKTDKEDTKIIIKGKKRKSQPGGTEEKERKSSESLFMSHFPSTLKKQLVDDWEF VTQLGKLVKLPRSPTVDDILKKYLEHRTKKDNKINDSYAEILKGLRCYFDKALPAMLLYKKERQQYSEEVKGDVSPSTIY GAEHLLRLFVKLPELLASVNMEEDALNKLQQKLLDILKFLQKNQSSFFLSAYDGGSKGTDGIKTK* |
CDS seq | >Os11t0545600-01 ATGTCCCAAGCTGGATCGGAATCCGCCGCTGCCAAGGAGCCGTCGTTCAAGGAGGGCGAGAGAGTGCTCGCCTACCACGG CCCGCTCCTCTACGAGGCCAAGGTTCAAAAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTT GGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGACGAAAATATCCGCAAACAACAAGAG CTTGAAAAGAGCCAAGTAGTTGACAAAAGCGTAAAATCTGGACGGTCAGCGCAGCATAAGCCAAAAGGCTCTAATGATGC AAAAACTGATAAAGAAGACACCAAGATTATTATCAAGGGGAAGAAACGCAAAAGTCAGCCTGGTGGGACTGAGGAGAAAG AAAGAAAATCATCTGAGAGTCTCTTCATGTCACATTTTCCTTCAACGCTAAAAAAGCAACTTGTTGATGATTGGGAGTTT GTCACGCAGCTGGGTAAGCTTGTGAAGCTACCTCGGTCCCCCACGGTCGATGATATTCTAAAGAAGTACTTGGAGCACCG GACAAAGAAGGATAACAAGATAAATGACTCTTACGCTGAGATTTTGAAAGGATTGCGATGCTACTTTGATAAAGCATTGC CTGCAATGCTTTTGTATAAGAAAGAGCGACAGCAGTACTCTGAAGAGGTTAAAGGCGATGTTTCGCCCTCAACTATATAT GGAGCTGAGCATCTACTGCGCCTTTTTGTGAAATTGCCGGAGCTACTTGCGTCTGTCAACATGGAAGAAGATGCACTCAA CAAACTACAGCAGAAATTGCTGGACATTCTCAAGTTTCTGCAGAAGAATCAGAGTTCGTTCTTCCTTTCTGCGTATGATG GTGGTTCTAAAGGTACTGATGGGATAAAGACCAAATAG |
Microexon DNA seq | GGTTGGAATAAGAG |
Microexon Amino Acid seq | GWNKS |
Microexon-tag DNA Seq | AAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTTGGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGAC |
Microexon-tag Amino Acid seq | KSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTD |
Transcript ID | Os.9270.1 |
Gene ID | Os.9270 |
Gene Name | MRG702 |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.8e-10 |
Motif start | 17 |
Motif end | 67 |
Protein seq | >Os.9270.1 MSQAGSESAAAKEPSFKEGERVLAYHGPLLYEAKVQKSENKEDEWRYHVHYLGWNKSWDEWVTNDRLLKLTDENIRKQQE LEKSQVVDKSVKSGRSAQHKPKGSNADAKTDKEDTKIIIKGKKRKSQPGGTEEKERKSSESLFMSHFPSTLKKQLVDDWE FVTQLGKLVKLPRSPTVDDILKKYLEHRTKKDNKINDSYAEILKGLRCYFDKALPAMLLYKKERQQYSEEVKGDVSPSTI YGAEHLLRLFVKLPELLASVNMEEDALNKLQQKLLDILKFLQKNQSSFFLSAYDGGSKGTDGIKTK* |
CDS seq | >Os.9270.1 ATGTCCCAAGCTGGATCGGAATCCGCCGCTGCCAAGGAGCCGTCGTTCAAGGAGGGCGAGAGAGTGCTCGCCTACCACGG CCCGCTCCTCTACGAGGCCAAGGTTCAAAAGTCCGAAAACAAGGAGGATGAGTGGCGGTATCATGTCCATTATCTTGGTT GGAATAAGAGCTGGGATGAATGGGTCACAAATGATCGCTTACTGAAATTGACCGACGAAAATATCCGCAAACAACAAGAG CTTGAAAAGAGCCAAGTAGTTGACAAAAGCGTAAAATCTGGACGGTCAGCGCAGCATAAGCCAAAAGGCTCTAATGCAGA TGCAAAAACTGATAAAGAAGACACCAAGATTATTATCAAGGGGAAGAAACGCAAAAGTCAGCCTGGTGGGACTGAGGAGA AAGAAAGAAAATCATCTGAGAGTCTCTTCATGTCACATTTTCCTTCAACGCTAAAAAAGCAACTTGTTGATGATTGGGAG TTTGTCACGCAGCTGGGTAAGCTTGTGAAGCTACCTCGGTCCCCCACGGTCGATGATATTCTAAAGAAGTACTTGGAGCA CCGGACAAAGAAGGATAACAAGATAAATGACTCTTACGCTGAGATTTTGAAAGGATTGCGATGCTACTTTGATAAAGCAT TGCCTGCAATGCTTTTGTATAAGAAAGAGCGACAGCAGTACTCTGAAGAGGTTAAAGGCGATGTTTCGCCCTCAACTATA TATGGAGCTGAGCATCTACTGCGCCTTTTTGTGAAATTGCCGGAGCTACTTGCGTCTGTCAACATGGAAGAAGATGCACT CAACAAACTACAGCAGAAATTGCTGGACATTCTCAAGTTTCTGCAGAAGAATCAGAGTTCGTTCTTCCTTTCTGCGTATG ATGGTGGTTCTAAAGGTACTGATGGGATAAAGACCAAATAG |