
Microexon ID | Ha_2:39181907-39181920:- |
Species | Helianthus annuus | Coordinates | 2:39181907..39181920 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ha_2:39181907-39181920:- does not have available information here.
Transcript ID | OTG33747 |
Protein ID | OTG33747 |
Gene ID | HannXRQ_Chr02g0038051 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.5e-11 |
Motif start | 48 |
Motif end | 94 |
Protein seq | >OTG33747 MQNSDAAITDDDDASATISDDGAATMDTDTDAGSKNDAVESLPPFLQGDKVLAYHSRRIYEAKVLEVDPTKERFFVHYQG WNKNWDEWVGMDRLMRHNKENLEKQKALEKEYPLEKSVRAFHLKPKNPNVTRGKKRKRLFKGTASYEKLVDVQIPSPLKK HLVNYCEYVTHMGKLVKLPCFPNVDEILKLYLEQQSNKDGSASVEIISGLRCYFDKALPVMLLYKGERKQYEEATANGIS PSKVYGAEHLLRLFVKLPEILYHANIEEETLADLQNKLQDFLKFLQKKQSLFFVSTYETPMGSCTTSK* |
CDS seq | >OTG33747 ATGCAAAACTCCGACGCTGCTATTACAGACGACGACGATGCATCCGCCACAATCTCCGACGACGGTGCCGCCACCATGGA CACGGATACCGACGCCGGAAGCAAAAACGACGCCGTTGAGTCTCTACCTCCGTTCCTTCAAGGAGATAAAGTTTTGGCCT ATCATAGCCGTCGTATCTACGAAGCTAAGGTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGT TGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAAGAGAATCTTGAGAAACAGAAAGC ATTGGAGAAAGAATACCCTTTGGAAAAATCAGTGCGTGCGTTCCATTTGAAGCCCAAAAATCCCAACGTGACAAGAGGCA AGAAGAGAAAAAGGTTGTTTAAGGGCACTGCATCTTATGAAAAACTCGTTGATGTCCAAATACCGTCACCATTGAAAAAG CATCTGGTCAATTATTGTGAATACGTAACTCATATGGGCAAGCTTGTTAAACTTCCATGTTTTCCAAATGTGGATGAAAT ATTAAAGCTTTATCTGGAGCAACAGTCGAATAAGGATGGCAGTGCTTCTGTAGAAATAATAAGTGGATTACGGTGTTACT TTGATAAAGCATTGCCTGTAATGCTTCTTTATAAAGGCGAGCGTAAACAGTACGAAGAAGCAACTGCAAACGGAATTTCT CCTTCTAAAGTTTACGGAGCCGAGCATCTATTACGCCTTTTTGTCAAACTACCCGAAATACTATACCATGCTAACATCGA AGAGGAGACGCTGGCAGACTTGCAAAACAAGTTACAAGACTTTCTCAAGTTCCTACAGAAGAAACAGAGCTTGTTCTTTG TATCAACCTATGAAACACCAATGGGTTCTTGCACAACGAGTAAATGA |
Microexon DNA seq | GGTTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | GTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGTTGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAA |
Microexon-tag Amino Acid seq | VLEVDPTKERFFVHYQGWNKNWDEWVGMDRLMRHNK |
Transcript ID | OTG33747 |
Gene ID | Ha.33796 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.5e-11 |
Motif start | 48 |
Motif end | 94 |
Protein seq | >OTG33747 MQNSDAAITDDDDASATISDDGAATMDTDTDAGSKNDAVESLPPFLQGDKVLAYHSRRIYEAKVLEVDPTKERFFVHYQG WNKNWDEWVGMDRLMRHNKENLEKQKALEKEYPLEKSVRAFHLKPKNPNVTRGKKRKRLFKGTASYEKLVDVQIPSPLKK HLVNYCEYVTHMGKLVKLPCFPNVDEILKLYLEQQSNKDGSASVEIISGLRCYFDKALPVMLLYKGERKQYEEATANGIS PSKVYGAEHLLRLFVKLPEILYHANIEEETLADLQNKLQDFLKFLQKKQSLFFVSTYETPMGSCTTSK* |
CDS seq | >OTG33747 ATGCAAAACTCCGACGCTGCTATTACAGACGACGACGATGCATCCGCCACAATCTCCGACGACGGTGCCGCCACCATGGA CACGGATACCGACGCCGGAAGCAAAAACGACGCCGTTGAGTCTCTACCTCCGTTCCTTCAAGGAGATAAAGTTTTGGCCT ATCATAGCCGTCGTATCTACGAAGCTAAGGTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGT TGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAAGAGAATCTTGAGAAACAGAAAGC ATTGGAGAAAGAATACCCTTTGGAAAAATCAGTGCGTGCGTTCCATTTGAAGCCCAAAAATCCCAACGTGACAAGAGGCA AGAAGAGAAAAAGGTTGTTTAAGGGCACTGCATCTTATGAAAAACTCGTTGATGTCCAAATACCGTCACCATTGAAAAAG CATCTGGTCAATTATTGTGAATACGTAACTCATATGGGCAAGCTTGTTAAACTTCCATGTTTTCCAAATGTGGATGAAAT ATTAAAGCTTTATCTGGAGCAACAGTCGAATAAGGATGGCAGTGCTTCTGTAGAAATAATAAGTGGATTACGGTGTTACT TTGATAAAGCATTGCCTGTAATGCTTCTTTATAAAGGCGAGCGTAAACAGTACGAAGAAGCAACTGCAAACGGAATTTCT CCTTCTAAAGTTTACGGAGCCGAGCATCTATTACGCCTTTTTGTCAAACTACCCGAAATACTATACCATGCTAACATCGA AGAGGAGACGCTGGCAGACTTGCAAAACAAGTTACAAGACTTTCTCAAGTTCCTACAGAAGAAACAGAGCTTGTTCTTTG TATCAACCTATGAAACACCAATGGGTTCTTGCACAACGAGTAAATGA |