Microexon ID Ha_2:39181907-39181920:-
Species Helianthus annuus
Coordinates 2:39181907..39181920
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Ha_2:39181907-39181920:- does not have available information here.
Transcript ID OTG33747
Protein ID OTG33747
Gene ID HannXRQ_Chr02g0038051
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.5e-11
Motif start 48
Motif end 94
Protein seq >OTG33747
MQNSDAAITDDDDASATISDDGAATMDTDTDAGSKNDAVESLPPFLQGDKVLAYHSRRIYEAKVLEVDPTKERFFVHYQG
WNKNWDEWVGMDRLMRHNKENLEKQKALEKEYPLEKSVRAFHLKPKNPNVTRGKKRKRLFKGTASYEKLVDVQIPSPLKK
HLVNYCEYVTHMGKLVKLPCFPNVDEILKLYLEQQSNKDGSASVEIISGLRCYFDKALPVMLLYKGERKQYEEATANGIS
PSKVYGAEHLLRLFVKLPEILYHANIEEETLADLQNKLQDFLKFLQKKQSLFFVSTYETPMGSCTTSK*
CDS seq >OTG33747
ATGCAAAACTCCGACGCTGCTATTACAGACGACGACGATGCATCCGCCACAATCTCCGACGACGGTGCCGCCACCATGGA
CACGGATACCGACGCCGGAAGCAAAAACGACGCCGTTGAGTCTCTACCTCCGTTCCTTCAAGGAGATAAAGTTTTGGCCT
ATCATAGCCGTCGTATCTACGAAGCTAAGGTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGT
TGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAAGAGAATCTTGAGAAACAGAAAGC
ATTGGAGAAAGAATACCCTTTGGAAAAATCAGTGCGTGCGTTCCATTTGAAGCCCAAAAATCCCAACGTGACAAGAGGCA
AGAAGAGAAAAAGGTTGTTTAAGGGCACTGCATCTTATGAAAAACTCGTTGATGTCCAAATACCGTCACCATTGAAAAAG
CATCTGGTCAATTATTGTGAATACGTAACTCATATGGGCAAGCTTGTTAAACTTCCATGTTTTCCAAATGTGGATGAAAT
ATTAAAGCTTTATCTGGAGCAACAGTCGAATAAGGATGGCAGTGCTTCTGTAGAAATAATAAGTGGATTACGGTGTTACT
TTGATAAAGCATTGCCTGTAATGCTTCTTTATAAAGGCGAGCGTAAACAGTACGAAGAAGCAACTGCAAACGGAATTTCT
CCTTCTAAAGTTTACGGAGCCGAGCATCTATTACGCCTTTTTGTCAAACTACCCGAAATACTATACCATGCTAACATCGA
AGAGGAGACGCTGGCAGACTTGCAAAACAAGTTACAAGACTTTCTCAAGTTCCTACAGAAGAAACAGAGCTTGTTCTTTG
TATCAACCTATGAAACACCAATGGGTTCTTGCACAACGAGTAAATGA
Microexon DNA seq GGTTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq GTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGTTGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAA
Microexon-tag Amino Acid seq VLEVDPTKERFFVHYQGWNKNWDEWVGMDRLMRHNK
Transcript ID OTG33747
Gene ID Ha.33796
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.5e-11
Motif start 48
Motif end 94
Protein seq >OTG33747
MQNSDAAITDDDDASATISDDGAATMDTDTDAGSKNDAVESLPPFLQGDKVLAYHSRRIYEAKVLEVDPTKERFFVHYQG
WNKNWDEWVGMDRLMRHNKENLEKQKALEKEYPLEKSVRAFHLKPKNPNVTRGKKRKRLFKGTASYEKLVDVQIPSPLKK
HLVNYCEYVTHMGKLVKLPCFPNVDEILKLYLEQQSNKDGSASVEIISGLRCYFDKALPVMLLYKGERKQYEEATANGIS
PSKVYGAEHLLRLFVKLPEILYHANIEEETLADLQNKLQDFLKFLQKKQSLFFVSTYETPMGSCTTSK*
CDS seq >OTG33747
ATGCAAAACTCCGACGCTGCTATTACAGACGACGACGATGCATCCGCCACAATCTCCGACGACGGTGCCGCCACCATGGA
CACGGATACCGACGCCGGAAGCAAAAACGACGCCGTTGAGTCTCTACCTCCGTTCCTTCAAGGAGATAAAGTTTTGGCCT
ATCATAGCCGTCGTATCTACGAAGCTAAGGTGTTAGAAGTTGATCCGACAAAGGAGCGCTTTTTTGTTCATTATCAAGGT
TGGAACAAAAACTGGGATGAATGGGTAGGCATGGATCGTCTTATGAGACACAACAAAGAGAATCTTGAGAAACAGAAAGC
ATTGGAGAAAGAATACCCTTTGGAAAAATCAGTGCGTGCGTTCCATTTGAAGCCCAAAAATCCCAACGTGACAAGAGGCA
AGAAGAGAAAAAGGTTGTTTAAGGGCACTGCATCTTATGAAAAACTCGTTGATGTCCAAATACCGTCACCATTGAAAAAG
CATCTGGTCAATTATTGTGAATACGTAACTCATATGGGCAAGCTTGTTAAACTTCCATGTTTTCCAAATGTGGATGAAAT
ATTAAAGCTTTATCTGGAGCAACAGTCGAATAAGGATGGCAGTGCTTCTGTAGAAATAATAAGTGGATTACGGTGTTACT
TTGATAAAGCATTGCCTGTAATGCTTCTTTATAAAGGCGAGCGTAAACAGTACGAAGAAGCAACTGCAAACGGAATTTCT
CCTTCTAAAGTTTACGGAGCCGAGCATCTATTACGCCTTTTTGTCAAACTACCCGAAATACTATACCATGCTAACATCGA
AGAGGAGACGCTGGCAGACTTGCAAAACAAGTTACAAGACTTTCTCAAGTTCCTACAGAAGAAACAGAGCTTGTTCTTTG
TATCAACCTATGAAACACCAATGGGTTCTTGCACAACGAGTAAATGA