
Microexon ID | Ha_16:173103831-173103844:+ |
Species | Helianthus annuus | Coordinates | 16:173103831..173103844 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAATAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAGGCGGAGATACGAAAGAATGAGTGGAAATACTTCGTTCATTACCTTGGTTGGAATAAAAATTGGGATGAATGGGTTGGTGTTGACCGTCTGATGAAATATACCGAT |
Microexon-tag Amino Acid Seq | KAEIRKNEWKYFVHYLGWNKNWDEWVGVDRLMKYTD |
Microexon-tag spanning region | 173103615-173109049 |
Microexon-tag prediction score | 0.982 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTF93169x |
Reference Transcript ID | OTF93169 |
Gene ID | HannXRQ_Chr16g0529941 |
Gene Name | NA |
Transcript ID | OTF93169 |
Protein ID | OTF93169 |
Gene ID | HannXRQ_Chr16g0529941 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.3e-11 |
Motif start | 32 |
Motif end | 80 |
Protein seq | >OTF93169 MGSSKDDSATDGDKSTANRRRPDSTSNLYSDGEKVLAYHGPRIYEAKVQKAEIRKNEWKYFVHYLGWNKNWDEWVGVDRL MKYTDENIQKQQALDKKQGAEKNPKSGRSSHAKPKILNDVKVEKEDVKSSGAKGKKRKSDSSTEKGNASVEKPVKIQIPS TLKKQLVDDWEFVNHQDKLVKLPRSPNVDDILAKYLEYRSKKDGMMTDAVGEILKGLRCYFDRALPVILLYNKERKQFQE FVTDNVSPSTIYGAEHLLRLFVKLPELLPYVNIEEDLAMRLQQKFLDFLKFLQKNQTSFFISSYDGSKDSDSSAVRGKTS QE* |
CDS seq | >OTF93169 ATGGGGAGTTCCAAAGACGATTCCGCCACAGACGGCGACAAATCCACCGCCAATCGCCGCCGTCCGGACTCCACTTCCAA CCTCTACTCCGACGGCGAGAAAGTCCTCGCTTATCACGGCCCTCGCATCTACGAAGCAAAGGTTCAAAAGGCGGAGATAC GAAAGAATGAGTGGAAATACTTCGTTCATTACCTTGGTTGGAATAAAAATTGGGATGAATGGGTTGGTGTTGACCGTCTG ATGAAATATACCGATGAGAACATTCAGAAGCAGCAAGCCCTTGACAAAAAACAAGGTGCCGAAAAGAACCCTAAATCTGG ACGCTCAAGTCACGCTAAGCCAAAAATACTAAATGATGTAAAGGTGGAAAAAGAGGATGTCAAGAGTAGTGGGGCAAAAG GGAAGAAGAGAAAGAGTGACTCGAGTACAGAGAAAGGGAATGCATCTGTTGAAAAGCCGGTGAAGATTCAAATTCCATCA ACTTTAAAGAAACAACTTGTGGATGATTGGGAATTCGTTAATCATCAAGATAAGCTTGTTAAACTTCCTCGCTCTCCAAA TGTTGATGACATATTGGCGAAGTACCTTGAATACAGGTCAAAGAAGGACGGCATGATGACGGATGCGGTCGGAGAGATAT TAAAGGGATTAAGGTGTTATTTCGACAGAGCGTTACCAGTTATTCTTTTGTACAATAAGGAGCGTAAACAATTTCAAGAA TTCGTTACAGATAATGTTTCTCCTTCAACCATATACGGTGCTGAACATCTCTTGCGTCTGTTTGTTAAATTACCCGAGTT ATTGCCATATGTTAACATAGAAGAGGATCTGGCCATGCGTTTGCAGCAAAAATTTCTCGACTTCCTCAAGTTTTTGCAAA AGAATCAAACGTCTTTCTTCATTTCTTCTTACGATGGGTCAAAGGATTCAGACAGCTCAGCAGTGAGGGGCAAAACGAGT CAGGAGTAG |
Microexon DNA seq | GGTTGGAATAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAGGCGGAGATACGAAAGAATGAGTGGAAATACTTCGTTCATTACCTTGGTTGGAATAAAAATTGGGATGAATGGGTTGGTGTTGACCGTCTGATGAAATATACCGAT |
Microexon-tag Amino Acid seq | KAEIRKNEWKYFVHYLGWNKNWDEWVGVDRLMKYTD |
Transcript ID | OTF93169 |
Gene ID | Ha.28851 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.4e-11 |
Motif start | 32 |
Motif end | 80 |
Protein seq | >OTF93169 MGSSKDDSATDGDKSTANRRRPDSTSNLYSDGEKVLAYHGPRIYEAKVQKAEIRKNEWKYFVHYLGWNKNWDEWVGVDRL MKYTDENIQKQQALDKKQGAEKNPKSGRSSHAKPKILNDVKVEKEDVKSSGAKGKKRKSDSSTEKGNASVEKPVKIQIPS TLKKQLVDDWEFVNHQDKLVKLPRSPNVDDILAKYLEYRSKKDGMMTDAVGEILKGLRCYFDRALPVILLYNKERKQFQE FVTDNVSPSTIYGAEHLLRLFVKLPELLPYVNIEEDLAMRLQQKFLDFLKFLQKNQTSFFISSYDGSKDSDSSAVRGKTS QE* |
CDS seq | >OTF93169 ATGGGGAGTTCCAAAGACGATTCCGCCACAGACGGCGACAAATCCACCGCCAATCGCCGCCGTCCGGACTCCACTTCCAA CCTCTACTCCGACGGCGAGAAAGTCCTCGCTTATCACGGCCCTCGCATCTACGAAGCAAAGGTTCAAAAGGCGGAGATAC GAAAGAATGAGTGGAAATACTTCGTTCATTACCTTGGTTGGAATAAAAATTGGGATGAATGGGTTGGTGTTGACCGTCTG ATGAAATATACCGATGAGAACATTCAGAAGCAGCAAGCCCTTGACAAAAAACAAGGTGCCGAAAAGAACCCTAAATCTGG ACGCTCAAGTCACGCTAAGCCAAAAATACTAAATGATGTAAAGGTGGAAAAAGAGGATGTCAAGAGTAGTGGGGCAAAAG GGAAGAAGAGAAAGAGTGACTCGAGTACAGAGAAAGGGAATGCATCTGTTGAAAAGCCGGTGAAGATTCAAATTCCATCA ACTTTAAAGAAACAACTTGTGGATGATTGGGAATTCGTTAATCATCAAGATAAGCTTGTTAAACTTCCTCGCTCTCCAAA TGTTGATGACATATTGGCGAAGTACCTTGAATACAGGTCAAAGAAGGACGGCATGATGACGGATGCGGTCGGAGAGATAT TAAAGGGATTAAGGTGTTATTTCGACAGAGCGTTACCAGTTATTCTTTTGTACAATAAGGAGCGTAAACAATTTCAAGAA TTCGTTACAGATAATGTTTCTCCTTCAACCATATACGGTGCTGAACATCTCTTGCGTCTGTTTGTTAAATTACCCGAGTT ATTGCCATATGTTAACATAGAAGAGGATCTGGCCATGCGTTTGCAGCAAAAATTTCTCGACTTCCTCAAGTTTTTGCAAA AGAATCAAACGTCTTTCTTCATTTCTTCTTACGATGGGTCAAAGGATTCAGACAGCTCAGCAGTGAGGGGCAAAACGAGT CAGGAGTAG |