Microexon ID Gm_5:26272407-26272420:-
Species Glycine max
Coordinates 5:26272407..26272420
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCTGGAGTAAAAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAAGCCGAGATCAGAAAGAGTGAATGGAAATATTTTGTTCACTACCTTGGCTGGAGTAAAAATTGGGACGAATGGGTAGGTGAGGAACGTTTGATGAAACATACTGAA
Microexon-tag Amino Acid Seq KAEIRKSEWKYFVHYLGWSKNWDEWVGEERLMKHTE
Microexon-tag spanning region26271979-26272710
Microexon-tag prediction score0.9689
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH57991x
Reference Transcript ID KRH57991
Gene ID GLYMA_05G099000
Gene Name NA
Transcript ID KRH57991
Protein ID KRH57991
Gene ID GLYMA_05G099000
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.2e-10
Motif start 31
Motif end 80
Protein seq >KRH57991
MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKYFVHYLGWSKNWDEWVGEERL
MKHTEENVMKQQALDKKQNVDKNVKSGRSSQGKAKSSTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPA
TLKKQLVDDWDSVTQQDKLVKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYND
AIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYDGTKVSEGKGQFQEEE
ESCSLCLG*
CDS seq >KRH57991
ATGGGAAATTCATCCAAGGACAACGACTCCGCCACCTCCGCCGACGCCTCCGCCGGCGACGTTCAGCCCTCCAATTCCGC
CGTCTACTCCGAGGGCGAGAAAGTCCTCGCCTACCACGGCCCTCGCATCTACGAAGCAAAGGTGCAAAAAGCCGAGATCA
GAAAGAGTGAATGGAAATATTTTGTTCACTACCTTGGCTGGAGTAAAAATTGGGACGAATGGGTAGGTGAGGAACGTTTG
ATGAAACATACTGAAGAGAATGTAATGAAACAACAGGCCCTAGACAAAAAGCAAAATGTAGACAAGAATGTTAAGTCTGG
GCGTTCATCTCAAGGAAAGGCCAAAAGTTCTACCGATGCCAAAATGGATAAAGAGGATGTCAAGAATAATGTGTCAAAAG
GGAAGAAACGAAAGCATGATGCGGGAGTTGAGAAGGGCAGCGGGACTGTTGAAAAGCTTGTCAAGATTCAAATTCCTGCA
ACATTAAAGAAACAACTTGTTGATGATTGGGACTCTGTTACTCAGCAAGATAAGCTTGTAAAACTTCCCCGTTCACCAAC
TGTTGATGAAATTCTGACAAAGTACCTTGAATACAAATCAAAGAAGGATGGCATTGCTCCTGATTCAATAGGAGAAATTT
TGAAAGGAATAAGGTGTTATTTTGATAAAGCATTGCCTATGATGCTCTTGTACAAAAAAGAACGCAAGCAATATAATGAT
GCAATTGTGGATAATGTGTCTCCATCAACCATATATGGTGCTGAACATTTATTACGCCTCTTTGTTAAGTTACCTGAGCT
TTTGGCATATGTTACTATTGAGGAAGAAACATTGAATCGCTTGCAGCAGAAATTACTTGACTTTCTCAAGTTTTTGCAGA
AAAATCAAAGTACCTTCTTTCTTTCAGCATATGATGGCACCAAAGTCTCTGAAGGAAAAGGTCAGTTCCAAGAAGAGGAA
GAGTCTTGTAGCCTATGTCTGGGTTAG
Microexon DNA seq GGCTGGAGTAAAAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAAGCCGAGATCAGAAAGAGTGAATGGAAATATTTTGTTCACTACCTTGGCTGGAGTAAAAATTGGGACGAATGGGTAGGTGAGGAACGTTTGATGAAACATACTGAA
Microexon-tag Amino Acid seq KAEIRKSEWKYFVHYLGWSKNWDEWVGEERLMKHTE
Transcript ID KRH57991
Gene ID Gm.40809
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.2e-10
Motif start 31
Motif end 80
Protein seq >KRH57991
MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKYFVHYLGWSKNWDEWVGEERL
MKHTEENVMKQQALDKKQNVDKNVKSGRSSQGKAKSSTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPA
TLKKQLVDDWDSVTQQDKLVKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYND
AIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQSTFFLSAYDGTKVSEGKGQFQEEE
ESCSLCLG*
CDS seq >KRH57991
ATGGGAAATTCATCCAAGGACAACGACTCCGCCACCTCCGCCGACGCCTCCGCCGGCGACGTTCAGCCCTCCAATTCCGC
CGTCTACTCCGAGGGCGAGAAAGTCCTCGCCTACCACGGCCCTCGCATCTACGAAGCAAAGGTGCAAAAAGCCGAGATCA
GAAAGAGTGAATGGAAATATTTTGTTCACTACCTTGGCTGGAGTAAAAATTGGGACGAATGGGTAGGTGAGGAACGTTTG
ATGAAACATACTGAAGAGAATGTAATGAAACAACAGGCCCTAGACAAAAAGCAAAATGTAGACAAGAATGTTAAGTCTGG
GCGTTCATCTCAAGGAAAGGCCAAAAGTTCTACCGATGCCAAAATGGATAAAGAGGATGTCAAGAATAATGTGTCAAAAG
GGAAGAAACGAAAGCATGATGCGGGAGTTGAGAAGGGCAGCGGGACTGTTGAAAAGCTTGTCAAGATTCAAATTCCTGCA
ACATTAAAGAAACAACTTGTTGATGATTGGGACTCTGTTACTCAGCAAGATAAGCTTGTAAAACTTCCCCGTTCACCAAC
TGTTGATGAAATTCTGACAAAGTACCTTGAATACAAATCAAAGAAGGATGGCATTGCTCCTGATTCAATAGGAGAAATTT
TGAAAGGAATAAGGTGTTATTTTGATAAAGCATTGCCTATGATGCTCTTGTACAAAAAAGAACGCAAGCAATATAATGAT
GCAATTGTGGATAATGTGTCTCCATCAACCATATATGGTGCTGAACATTTATTACGCCTCTTTGTTAAGTTACCTGAGCT
TTTGGCATATGTTACTATTGAGGAAGAAACATTGAATCGCTTGCAGCAGAAATTACTTGACTTTCTCAAGTTTTTGCAGA
AAAATCAAAGTACCTTCTTTCTTTCAGCATATGATGGCACCAAAGTCTCTGAAGGAAAAGGTCAGTTCCAAGAAGAGGAA
GAGTCTTGTAGCCTATGTCTGGGTTAG