
Microexon ID | Gm_4:3448978-3448991:- |
Species | Glycine max | Coordinates | 4:3448978..3448991 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAAGAAGAG |
Microexon Amino Acid seq | GWKKR |
Microexon-tag DNA Seq | GTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAGAGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAG |
Microexon-tag Amino Acid Seq | VEYRNTKGWQFLVHYLGWKKRWDEWLDLDRLMKHTE |
Microexon-tag spanning region | 3448848-3449137 |
Microexon-tag prediction score | 0.8839 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH61355x |
Reference Transcript ID | KRH61355 |
Gene ID | GLYMA_04G042700 |
Gene Name | NA |
Transcript ID | KRH61355 |
Protein ID | KRH61355 |
Gene ID | GLYMA_04G042700 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 6e-08 |
Motif start | 41 |
Motif end | 91 |
Protein seq | >KRH61355 MEMGISKTTTSTEVTDDNSNSSSTTHTQTRNHISFAAPYAVGEKVLTNHSDCLYEAKVRQVEYRNTKGWQFLVHYLGWKK RWDEWLDLDRLMKHTEENMRKKHDLDEKLGNDKNAKVPRGSLAKSKPTNVSRGRKRRNESVIKGKPAVDPDKLVNIQIPP TLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKNYFDYRLKKCGSVGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQE ACPANVFPSAIYGAEHLLRLFVKLPELLFHASVEEETLMELQAHLIDFLRFQCFPPGSCKKTRAHSSFLLIMLQKVLRTA PTNKCVCLVKPAYVYVWTQPVHVEELKNQLHMLLRAANFFPSQIDVIPGVLLLVSLVTITFPGYL* |
CDS seq | >KRH61355 ATGGAAATGGGGATTTCCAAGACAACAACAAGCACTGAGGTTACCGACGACAATTCCAATAGCAGCAGCACCACTCATAC TCAAACTCGCAACCATATCTCCTTTGCTGCTCCCTACGCCGTAGGAGAAAAGGTCTTAACCAATCATTCTGATTGTCTTT ACGAAGCCAAGGTGAGGCAAGTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAG AGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACATGACCTTGACGA GAAGCTTGGCAATGATAAGAATGCAAAAGTCCCGCGTGGTTCTCTGGCGAAGTCCAAGCCTACTAACGTTTCAAGAGGCA GGAAACGAAGGAATGAATCTGTCATCAAGGGAAAACCTGCAGTTGATCCTGACAAGCTTGTTAACATTCAAATTCCTCCA ACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTCGGCAAGCTTGTTAAACTCCCTCGTACTCCTAA TGTGAAAGGCATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGGTGGGTGATTCAGTTGAAGAAATTA TGAAAGGATTGTCTTGTTACTTCGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAACGAGCGCCAACAGTACCAAGAG GCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGTTAAGCTGCCCGAGTT ACTGTTTCATGCTAGTGTTGAAGAGGAGACATTGATGGAACTTCAAGCACACTTAATTGACTTTCTCAGGTTTCAATGTT TTCCTCCAGGTTCTTGCAAAAAAACCAGAGCACATTCTTCCTTTCTACTTATCATGTTGCAGAAGGTATTGAGAACAGCA CCAACAAACAAGTGTGTTTGCCTTGTTAAGCCTGCATATGTTTATGTATGGACGCAACCTGTTCATGTGGAAGAACTCAA GAATCAATTACATATGCTTCTAAGGGCTGCAAACTTTTTTCCTAGCCAAATTGATGTCATTCCTGGAGTTCTGCTTCTGG TTAGTCTAGTGACTATCACTTTTCCTGGTTATTTATAA |
Microexon DNA seq | GGTTGGAAGAAGAG |
Microexon Amino Acid seq | GWKKR |
Microexon-tag DNA Seq | GTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAGAGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAG |
Microexon-tag Amino Acid seq | VEYRNTKGWQFLVHYLGWKKRWDEWLDLDRLMKHTE |
Transcript ID | Gm.37820.1 |
Gene ID | Gm.37820 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 3.6e-08 |
Motif start | 41 |
Motif end | 91 |
Protein seq | >Gm.37820.1 MEMGISKTTTSTEVTDDNSNSSSTTHTQTRNHISFAAPYAVGEKVLTNHSDCLYEAKVRQVEYRNTKGWQFLVHYLGWKK RWDEWLDLDRLMKHTEENMRKKHDLDEKLGNDKNAKVPRGSLAKSKPTNVSRGRKRRNESVIKGKPAVDPDKLVNIQIPP TLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKNYFDYRLKKCGSVGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQE ACPANVFPSAIYGAEHLLRLFGMLVCLPQDELII* |
CDS seq | >Gm.37820.1 ATGGAAATGGGGATTTCCAAGACAACAACAAGCACTGAGGTTACCGACGACAATTCCAATAGCAGCAGCACCACTCATAC TCAAACTCGCAACCATATCTCCTTTGCTGCTCCCTACGCCGTAGGAGAAAAGGTCTTAACCAATCATTCTGATTGTCTTT ACGAAGCCAAGGTGAGGCAAGTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAG AGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACATGACCTTGACGA GAAGCTTGGCAATGATAAGAATGCAAAAGTCCCGCGTGGTTCTCTGGCGAAGTCCAAGCCTACTAACGTTTCAAGAGGCA GGAAACGAAGGAATGAATCTGTCATCAAGGGAAAACCTGCAGTTGATCCTGACAAGCTTGTTAACATTCAAATTCCTCCA ACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTCGGCAAGCTTGTTAAACTCCCTCGTACTCCTAA TGTGAAAGGCATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGGTGGGTGATTCAGTTGAAGAAATTA TGAAAGGATTGTCTTGTTACTTCGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAACGAGCGCCAACAGTACCAAGAG GCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGGTATGCTCGTTTGTCT GCCACAAGACGAGCTTATTATATGA |