Microexon ID Gm_4:3448978-3448991:-
Species Glycine max
Coordinates 4:3448978..3448991
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAAGAAGAG
Microexon Amino Acid seq GWKKR
Microexon-tag DNA Seq GTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAGAGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAG
Microexon-tag Amino Acid Seq VEYRNTKGWQFLVHYLGWKKRWDEWLDLDRLMKHTE
Microexon-tag spanning region3448848-3449137
Microexon-tag prediction score0.8839
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH61355x
Reference Transcript ID KRH61355
Gene ID GLYMA_04G042700
Gene Name NA
Transcript ID KRH61355
Protein ID KRH61355
Gene ID GLYMA_04G042700
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 6e-08
Motif start 41
Motif end 91
Protein seq >KRH61355
MEMGISKTTTSTEVTDDNSNSSSTTHTQTRNHISFAAPYAVGEKVLTNHSDCLYEAKVRQVEYRNTKGWQFLVHYLGWKK
RWDEWLDLDRLMKHTEENMRKKHDLDEKLGNDKNAKVPRGSLAKSKPTNVSRGRKRRNESVIKGKPAVDPDKLVNIQIPP
TLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKNYFDYRLKKCGSVGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQE
ACPANVFPSAIYGAEHLLRLFVKLPELLFHASVEEETLMELQAHLIDFLRFQCFPPGSCKKTRAHSSFLLIMLQKVLRTA
PTNKCVCLVKPAYVYVWTQPVHVEELKNQLHMLLRAANFFPSQIDVIPGVLLLVSLVTITFPGYL*
CDS seq >KRH61355
ATGGAAATGGGGATTTCCAAGACAACAACAAGCACTGAGGTTACCGACGACAATTCCAATAGCAGCAGCACCACTCATAC
TCAAACTCGCAACCATATCTCCTTTGCTGCTCCCTACGCCGTAGGAGAAAAGGTCTTAACCAATCATTCTGATTGTCTTT
ACGAAGCCAAGGTGAGGCAAGTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAG
AGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACATGACCTTGACGA
GAAGCTTGGCAATGATAAGAATGCAAAAGTCCCGCGTGGTTCTCTGGCGAAGTCCAAGCCTACTAACGTTTCAAGAGGCA
GGAAACGAAGGAATGAATCTGTCATCAAGGGAAAACCTGCAGTTGATCCTGACAAGCTTGTTAACATTCAAATTCCTCCA
ACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTCGGCAAGCTTGTTAAACTCCCTCGTACTCCTAA
TGTGAAAGGCATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGGTGGGTGATTCAGTTGAAGAAATTA
TGAAAGGATTGTCTTGTTACTTCGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAACGAGCGCCAACAGTACCAAGAG
GCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGTTAAGCTGCCCGAGTT
ACTGTTTCATGCTAGTGTTGAAGAGGAGACATTGATGGAACTTCAAGCACACTTAATTGACTTTCTCAGGTTTCAATGTT
TTCCTCCAGGTTCTTGCAAAAAAACCAGAGCACATTCTTCCTTTCTACTTATCATGTTGCAGAAGGTATTGAGAACAGCA
CCAACAAACAAGTGTGTTTGCCTTGTTAAGCCTGCATATGTTTATGTATGGACGCAACCTGTTCATGTGGAAGAACTCAA
GAATCAATTACATATGCTTCTAAGGGCTGCAAACTTTTTTCCTAGCCAAATTGATGTCATTCCTGGAGTTCTGCTTCTGG
TTAGTCTAGTGACTATCACTTTTCCTGGTTATTTATAA
Microexon DNA seq GGTTGGAAGAAGAG
Microexon Amino Acid seq GWKKR
Microexon-tag DNA Seq GTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAGAGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAG
Microexon-tag Amino Acid seq VEYRNTKGWQFLVHYLGWKKRWDEWLDLDRLMKHTE
Transcript ID Gm.37820.1
Gene ID Gm.37820
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 3.6e-08
Motif start 41
Motif end 91
Protein seq >Gm.37820.1
MEMGISKTTTSTEVTDDNSNSSSTTHTQTRNHISFAAPYAVGEKVLTNHSDCLYEAKVRQVEYRNTKGWQFLVHYLGWKK
RWDEWLDLDRLMKHTEENMRKKHDLDEKLGNDKNAKVPRGSLAKSKPTNVSRGRKRRNESVIKGKPAVDPDKLVNIQIPP
TLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKNYFDYRLKKCGSVGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQE
ACPANVFPSAIYGAEHLLRLFGMLVCLPQDELII*
CDS seq >Gm.37820.1
ATGGAAATGGGGATTTCCAAGACAACAACAAGCACTGAGGTTACCGACGACAATTCCAATAGCAGCAGCACCACTCATAC
TCAAACTCGCAACCATATCTCCTTTGCTGCTCCCTACGCCGTAGGAGAAAAGGTCTTAACCAATCATTCTGATTGTCTTT
ACGAAGCCAAGGTGAGGCAAGTTGAATACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAG
AGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACATGACCTTGACGA
GAAGCTTGGCAATGATAAGAATGCAAAAGTCCCGCGTGGTTCTCTGGCGAAGTCCAAGCCTACTAACGTTTCAAGAGGCA
GGAAACGAAGGAATGAATCTGTCATCAAGGGAAAACCTGCAGTTGATCCTGACAAGCTTGTTAACATTCAAATTCCTCCA
ACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTCGGCAAGCTTGTTAAACTCCCTCGTACTCCTAA
TGTGAAAGGCATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGGTGGGTGATTCAGTTGAAGAAATTA
TGAAAGGATTGTCTTGTTACTTCGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAACGAGCGCCAACAGTACCAAGAG
GCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGGTATGCTCGTTTGTCT
GCCACAAGACGAGCTTATTATATGA