Microexon ID At_4:17548453-17548466:-
Species Arabidopsis thaliana
Coordinates 4:17548453..17548466
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAGGTCGAGCTTCGGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTGTTGAAACATACCGAG
Microexon-tag Amino Acid Seq KVELRKKEWKYFVHYLGWNKNWDEWVSADRLLKHTE
Microexon-tag spanning region17548317-17548623
Microexon-tag prediction score0.9654
Overlapped with the annotated transcript (%) 100
New Transcript ID AT4G37280.1x
Reference Transcript ID AT4G37280.1
Gene ID AT4G37280
Gene Name MRG1
Transcript ID AT4G37280.1
Protein ID AT4G37280.1
Gene ID AT4G37280
Gene Name MRG1
Pfam domain motif Tudor-knot
Motif E-value 2.4e-11
Motif start 31
Motif end 80
Protein seq >AT4G37280.1
MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKYFVHYLGWNKNWDEWVSADRL
LKHTEENLVKQKALDKKQGVEKGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHESGNEKDNVTAEKLMKIQIPA
SLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFKTKKDGMVTDSVAEILKGIRSYFDKALPVMLLYKKERRQYQE
SIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD
*
CDS seq >AT4G37280.1
ATGGGAAGCTCGTCGAAGGAAGAGACGGCGAGTGACGGAGATACGGCGAGCGGTGGCGCCTCACCGTCCAACGACGGCAG
ACTCTTCTCGGAGGGCGAGCGTGTTCTCGCTTACCATGGTCCTCGCGTCTACGGAGCCAAGGTTCAAAAGGTCGAGCTTC
GGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTG
TTGAAACATACCGAGGAGAATCTTGTCAAACAGAAAGCTCTAGACAAAAAGCAAGGAGTTGAAAAAGGTACCAAGTCTGG
CCGTTCCGCTCAGACAAAAACTAGAAGCTCTGCAGACACAAAGGCTGATAAAGATGACACCAAGACCAATGCTGCAAAAG
GGAAGAAACGAAAGCACGAGTCAGGCAATGAGAAGGATAATGTAACGGCGGAGAAGCTAATGAAGATCCAAATTCCCGCA
TCACTTAAAAAGCAACTCACTGACGACTGGGAGTATATTGCGCAGAAGGACAAGGTTGTGAAACTTCCTCGTTCACCTAA
CGTCGATGAGATATTGTCCAAGTACCTTGAATTCAAAACCAAGAAGGATGGAATGGTAACTGATTCGGTCGCTGAAATAT
TGAAAGGCATAAGGAGTTATTTCGACAAGGCATTGCCAGTGATGCTCCTATATAAGAAAGAGAGGCGACAATACCAAGAA
TCAATCGTGGATGATACTTCACCTTCAACTGTTTATGGCGCCGAGCATTTGCTCCGTCTCTTTGTCAAGTTGCCAGATCT
TTTTTCATATGTAAACATGGAAGAAGAAACATGGAGTCGCATGCAACAAACATTATCAGACTTCCTCAAGTTTATTCAGA
AGAATCAGAGCACTTTCTTGCTACCATCAGCATATGATTCTGATAAGGTTTCAGATGGTAAAGGCAAAGGAAAAGACGAC
TGA
Microexon DNA seq GGTTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAGGTCGAGCTTCGGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTGTTGAAACATACCGAG
Microexon-tag Amino Acid seq KVELRKKEWKYFVHYLGWNKNWDEWVSADRLLKHTE
Transcript ID AT4G37280.1
Gene ID At.21316
Gene Name MRG1
Pfam domain motif Tudor-knot
Motif E-value 2.5e-11
Motif start 31
Motif end 80
Protein seq >AT4G37280.1
MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKYFVHYLGWNKNWDEWVSADRL
LKHTEENLVKQKALDKKQGVEKGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHESGNEKDNVTAEKLMKIQIPA
SLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFKTKKDGMVTDSVAEILKGIRSYFDKALPVMLLYKKERRQYQE
SIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD
*
CDS seq >AT4G37280.1
ATGGGAAGCTCGTCGAAGGAAGAGACGGCGAGTGACGGAGATACGGCGAGCGGTGGCGCCTCACCGTCCAACGACGGCAG
ACTCTTCTCGGAGGGCGAGCGTGTTCTCGCTTACCATGGTCCTCGCGTCTACGGAGCCAAGGTTCAAAAGGTCGAGCTTC
GGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTG
TTGAAACATACCGAGGAGAATCTTGTCAAACAGAAAGCTCTAGACAAAAAGCAAGGAGTTGAAAAAGGTACCAAGTCTGG
CCGTTCCGCTCAGACAAAAACTAGAAGCTCTGCAGACACAAAGGCTGATAAAGATGACACCAAGACCAATGCTGCAAAAG
GGAAGAAACGAAAGCACGAGTCAGGCAATGAGAAGGATAATGTAACGGCGGAGAAGCTAATGAAGATCCAAATTCCCGCA
TCACTTAAAAAGCAACTCACTGACGACTGGGAGTATATTGCGCAGAAGGACAAGGTTGTGAAACTTCCTCGTTCACCTAA
CGTCGATGAGATATTGTCCAAGTACCTTGAATTCAAAACCAAGAAGGATGGAATGGTAACTGATTCGGTCGCTGAAATAT
TGAAAGGCATAAGGAGTTATTTCGACAAGGCATTGCCAGTGATGCTCCTATATAAGAAAGAGAGGCGACAATACCAAGAA
TCAATCGTGGATGATACTTCACCTTCAACTGTTTATGGCGCCGAGCATTTGCTCCGTCTCTTTGTCAAGTTGCCAGATCT
TTTTTCATATGTAAACATGGAAGAAGAAACATGGAGTCGCATGCAACAAACATTATCAGACTTCCTCAAGTTTATTCAGA
AGAATCAGAGCACTTTCTTGCTACCATCAGCATATGATTCTGATAAGGTTTCAGATGGTAAAGGCAAAGGAAAAGACGAC
TGA