
Microexon ID | At_4:17548453-17548466:- |
Species | Arabidopsis thaliana | Coordinates | 4:17548453..17548466 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAGGTCGAGCTTCGGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTGTTGAAACATACCGAG |
Microexon-tag Amino Acid Seq | KVELRKKEWKYFVHYLGWNKNWDEWVSADRLLKHTE |
Microexon-tag spanning region | 17548317-17548623 |
Microexon-tag prediction score | 0.9654 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G37280.1x |
Reference Transcript ID | AT4G37280.1 |
Gene ID | AT4G37280 |
Gene Name | MRG1 |
Transcript ID | AT4G37280.1 |
Protein ID | AT4G37280.1 |
Gene ID | AT4G37280 |
Gene Name | MRG1 |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.4e-11 |
Motif start | 31 |
Motif end | 80 |
Protein seq | >AT4G37280.1 MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKYFVHYLGWNKNWDEWVSADRL LKHTEENLVKQKALDKKQGVEKGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHESGNEKDNVTAEKLMKIQIPA SLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFKTKKDGMVTDSVAEILKGIRSYFDKALPVMLLYKKERRQYQE SIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD * |
CDS seq | >AT4G37280.1 ATGGGAAGCTCGTCGAAGGAAGAGACGGCGAGTGACGGAGATACGGCGAGCGGTGGCGCCTCACCGTCCAACGACGGCAG ACTCTTCTCGGAGGGCGAGCGTGTTCTCGCTTACCATGGTCCTCGCGTCTACGGAGCCAAGGTTCAAAAGGTCGAGCTTC GGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTG TTGAAACATACCGAGGAGAATCTTGTCAAACAGAAAGCTCTAGACAAAAAGCAAGGAGTTGAAAAAGGTACCAAGTCTGG CCGTTCCGCTCAGACAAAAACTAGAAGCTCTGCAGACACAAAGGCTGATAAAGATGACACCAAGACCAATGCTGCAAAAG GGAAGAAACGAAAGCACGAGTCAGGCAATGAGAAGGATAATGTAACGGCGGAGAAGCTAATGAAGATCCAAATTCCCGCA TCACTTAAAAAGCAACTCACTGACGACTGGGAGTATATTGCGCAGAAGGACAAGGTTGTGAAACTTCCTCGTTCACCTAA CGTCGATGAGATATTGTCCAAGTACCTTGAATTCAAAACCAAGAAGGATGGAATGGTAACTGATTCGGTCGCTGAAATAT TGAAAGGCATAAGGAGTTATTTCGACAAGGCATTGCCAGTGATGCTCCTATATAAGAAAGAGAGGCGACAATACCAAGAA TCAATCGTGGATGATACTTCACCTTCAACTGTTTATGGCGCCGAGCATTTGCTCCGTCTCTTTGTCAAGTTGCCAGATCT TTTTTCATATGTAAACATGGAAGAAGAAACATGGAGTCGCATGCAACAAACATTATCAGACTTCCTCAAGTTTATTCAGA AGAATCAGAGCACTTTCTTGCTACCATCAGCATATGATTCTGATAAGGTTTCAGATGGTAAAGGCAAAGGAAAAGACGAC TGA |
Microexon DNA seq | GGTTGGAACAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAGGTCGAGCTTCGGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTGTTGAAACATACCGAG |
Microexon-tag Amino Acid seq | KVELRKKEWKYFVHYLGWNKNWDEWVSADRLLKHTE |
Transcript ID | AT4G37280.1 |
Gene ID | At.21316 |
Gene Name | MRG1 |
Pfam domain motif | Tudor-knot |
Motif E-value | 2.5e-11 |
Motif start | 31 |
Motif end | 80 |
Protein seq | >AT4G37280.1 MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKYFVHYLGWNKNWDEWVSADRL LKHTEENLVKQKALDKKQGVEKGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHESGNEKDNVTAEKLMKIQIPA SLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFKTKKDGMVTDSVAEILKGIRSYFDKALPVMLLYKKERRQYQE SIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD * |
CDS seq | >AT4G37280.1 ATGGGAAGCTCGTCGAAGGAAGAGACGGCGAGTGACGGAGATACGGCGAGCGGTGGCGCCTCACCGTCCAACGACGGCAG ACTCTTCTCGGAGGGCGAGCGTGTTCTCGCTTACCATGGTCCTCGCGTCTACGGAGCCAAGGTTCAAAAGGTCGAGCTTC GGAAAAAGGAGTGGAAATACTTTGTGCACTATCTTGGTTGGAACAAAAATTGGGATGAATGGGTTAGTGCGGATAGATTG TTGAAACATACCGAGGAGAATCTTGTCAAACAGAAAGCTCTAGACAAAAAGCAAGGAGTTGAAAAAGGTACCAAGTCTGG CCGTTCCGCTCAGACAAAAACTAGAAGCTCTGCAGACACAAAGGCTGATAAAGATGACACCAAGACCAATGCTGCAAAAG GGAAGAAACGAAAGCACGAGTCAGGCAATGAGAAGGATAATGTAACGGCGGAGAAGCTAATGAAGATCCAAATTCCCGCA TCACTTAAAAAGCAACTCACTGACGACTGGGAGTATATTGCGCAGAAGGACAAGGTTGTGAAACTTCCTCGTTCACCTAA CGTCGATGAGATATTGTCCAAGTACCTTGAATTCAAAACCAAGAAGGATGGAATGGTAACTGATTCGGTCGCTGAAATAT TGAAAGGCATAAGGAGTTATTTCGACAAGGCATTGCCAGTGATGCTCCTATATAAGAAAGAGAGGCGACAATACCAAGAA TCAATCGTGGATGATACTTCACCTTCAACTGTTTATGGCGCCGAGCATTTGCTCCGTCTCTTTGTCAAGTTGCCAGATCT TTTTTCATATGTAAACATGGAAGAAGAAACATGGAGTCGCATGCAACAAACATTATCAGACTTCCTCAAGTTTATTCAGA AGAATCAGAGCACTTTCTTGCTACCATCAGCATATGATTCTGATAAGGTTTCAGATGGTAAAGGCAAAGGAAAAGACGAC TGA |