Microexon ID At_1:601547-601560:-
Species Arabidopsis thaliana
Coordinates 1:601547..601560
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAACAAAAG
Microexon Amino Acid seq GWNKS
Microexon-tag DNA Seq AAAGTTGAATTTAAAGACAATGAATGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTCAGAT
Microexon-tag Amino Acid Seq KVEFKDNEWKYFVHYIGWNKSWDEWIRLDCLLKHSD
Microexon-tag spanning region601327-601700
Microexon-tag prediction score0.9228
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G02740.1x
Reference Transcript ID AT1G02740.1
Gene ID AT1G02740
Gene Name MRG2
Transcript ID AT1G02740.1
Protein ID AT1G02740.1
Gene ID AT1G02740
Gene Name MRG2
Pfam domain motif Tudor-knot
Motif E-value 1.8e-11
Motif start 53
Motif end 101
Protein seq >AT1G02740.1
MGSPNAAAETDLTTDDFIGDTRRDSGSDTETNTDCDGEDLPLLLLPAPPGHFEEGERVLAKHSDCFYEAKVLKVEFKDNE
WKYFVHYIGWNKSWDEWIRLDCLLKHSDENIEKQKEQGLKQQGIKSAMAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVL
PSDNLLSFNIPPALRKQLLDDFEFVTQMQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVM
LLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVE
EMEKKEG*
CDS seq >AT1G02740.1
ATGGGAAGCCCTAACGCCGCCGCCGAGACGGATCTAACAACCGATGATTTCATCGGAGACACACGACGGGACTCTGGTTC
TGATACAGAGACCAACACCGATTGTGACGGAGAAGATTTGCCTCTTCTTCTGCTACCTGCTCCTCCCGGCCACTTCGAAG
AAGGAGAGAGAGTTTTAGCCAAACACAGTGATTGCTTCTACGAAGCCAAGGTTCTTAAAGTTGAATTTAAAGACAATGAA
TGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTC
AGATGAGAATATTGAGAAACAGAAAGAACAGGGTTTGAAACAGCAAGGGATTAAGAGTGCTATGGCTTGGAAAGTGTCAA
AGATGAAACCTAGAAGCCCTAATGTTGCTAGAGGAAGAAAGCGGAAGCAAGATTCTGTTGATACGGAGAAGAATGTGCTT
CCCTCTGACAACCTTTTAAGTTTCAATATTCCACCAGCATTAAGGAAGCAACTTCTTGACGATTTTGAATTTGTTACTCA
GATGCAGAAGCTTGTGCAACTTCCGCGTTCTCCAAATGTGGATGGCATCTTGAAGAAGTACATTGACAGCCAAATGAAGA
AACATGGCAGGGTAACAGATTCATTAGAGGAAATTCTGAAAGGCTTGCGTTGCTACTTTGACAAAGCTTTACCGGTGATG
TTGCTTTACAACAATGAACGGAAGCAGTACGAGGAATCCGTATCAGGGGGTGTTTCTCCTTCAACTGTGTACGGAGCAGA
GCATTTGTTGCGACTCTTTGTGAAATTACCGGAGTTGCTAGTACATGTGAATATGGCAGAAGAGACATTGAAGGAATTGC
AGGACAACTTTGTTGATATTCTCAGGTTCTTGAGGAAGAATCAGAGTGTGCTTTTTGTATCGACATACAAAGCAGTGGAA
GAAATGGAGAAGAAAGAAGGTTAG
Microexon DNA seq GGTTGGAACAAAAG
Microexon Amino Acid seq GWNKS
Microexon-tag DNA Seq AAAGTTGAATTTAAAGACAATGAATGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTCAGAT
Microexon-tag Amino Acid seq KVEFKDNEWKYFVHYIGWNKSWDEWIRLDCLLKHSD
Transcript ID AT1G02740.1
Gene ID At.188
Gene Name MRG2
Pfam domain motif Tudor-knot
Motif E-value 1.8e-11
Motif start 53
Motif end 101
Protein seq >AT1G02740.1
MGSPNAAAETDLTTDDFIGDTRRDSGSDTETNTDCDGEDLPLLLLPAPPGHFEEGERVLAKHSDCFYEAKVLKVEFKDNE
WKYFVHYIGWNKSWDEWIRLDCLLKHSDENIEKQKEQGLKQQGIKSAMAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVL
PSDNLLSFNIPPALRKQLLDDFEFVTQMQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVM
LLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVE
EMEKKEG*
CDS seq >AT1G02740.1
ATGGGAAGCCCTAACGCCGCCGCCGAGACGGATCTAACAACCGATGATTTCATCGGAGACACACGACGGGACTCTGGTTC
TGATACAGAGACCAACACCGATTGTGACGGAGAAGATTTGCCTCTTCTTCTGCTACCTGCTCCTCCCGGCCACTTCGAAG
AAGGAGAGAGAGTTTTAGCCAAACACAGTGATTGCTTCTACGAAGCCAAGGTTCTTAAAGTTGAATTTAAAGACAATGAA
TGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTC
AGATGAGAATATTGAGAAACAGAAAGAACAGGGTTTGAAACAGCAAGGGATTAAGAGTGCTATGGCTTGGAAAGTGTCAA
AGATGAAACCTAGAAGCCCTAATGTTGCTAGAGGAAGAAAGCGGAAGCAAGATTCTGTTGATACGGAGAAGAATGTGCTT
CCCTCTGACAACCTTTTAAGTTTCAATATTCCACCAGCATTAAGGAAGCAACTTCTTGACGATTTTGAATTTGTTACTCA
GATGCAGAAGCTTGTGCAACTTCCGCGTTCTCCAAATGTGGATGGCATCTTGAAGAAGTACATTGACAGCCAAATGAAGA
AACATGGCAGGGTAACAGATTCATTAGAGGAAATTCTGAAAGGCTTGCGTTGCTACTTTGACAAAGCTTTACCGGTGATG
TTGCTTTACAACAATGAACGGAAGCAGTACGAGGAATCCGTATCAGGGGGTGTTTCTCCTTCAACTGTGTACGGAGCAGA
GCATTTGTTGCGACTCTTTGTGAAATTACCGGAGTTGCTAGTACATGTGAATATGGCAGAAGAGACATTGAAGGAATTGC
AGGACAACTTTGTTGATATTCTCAGGTTCTTGAGGAAGAATCAGAGTGTGCTTTTTGTATCGACATACAAAGCAGTGGAA
GAAATGGAGAAGAAAGAAGGTTAG