
Microexon ID | At_1:601547-601560:- |
Species | Arabidopsis thaliana | Coordinates | 1:601547..601560 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAACAAAAG |
Microexon Amino Acid seq | GWNKS |
Microexon-tag DNA Seq | AAAGTTGAATTTAAAGACAATGAATGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTCAGAT |
Microexon-tag Amino Acid Seq | KVEFKDNEWKYFVHYIGWNKSWDEWIRLDCLLKHSD |
Microexon-tag spanning region | 601327-601700 |
Microexon-tag prediction score | 0.9228 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G02740.1x |
Reference Transcript ID | AT1G02740.1 |
Gene ID | AT1G02740 |
Gene Name | MRG2 |
Transcript ID | AT1G02740.1 |
Protein ID | AT1G02740.1 |
Gene ID | AT1G02740 |
Gene Name | MRG2 |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.8e-11 |
Motif start | 53 |
Motif end | 101 |
Protein seq | >AT1G02740.1 MGSPNAAAETDLTTDDFIGDTRRDSGSDTETNTDCDGEDLPLLLLPAPPGHFEEGERVLAKHSDCFYEAKVLKVEFKDNE WKYFVHYIGWNKSWDEWIRLDCLLKHSDENIEKQKEQGLKQQGIKSAMAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVL PSDNLLSFNIPPALRKQLLDDFEFVTQMQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVM LLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVE EMEKKEG* |
CDS seq | >AT1G02740.1 ATGGGAAGCCCTAACGCCGCCGCCGAGACGGATCTAACAACCGATGATTTCATCGGAGACACACGACGGGACTCTGGTTC TGATACAGAGACCAACACCGATTGTGACGGAGAAGATTTGCCTCTTCTTCTGCTACCTGCTCCTCCCGGCCACTTCGAAG AAGGAGAGAGAGTTTTAGCCAAACACAGTGATTGCTTCTACGAAGCCAAGGTTCTTAAAGTTGAATTTAAAGACAATGAA TGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTC AGATGAGAATATTGAGAAACAGAAAGAACAGGGTTTGAAACAGCAAGGGATTAAGAGTGCTATGGCTTGGAAAGTGTCAA AGATGAAACCTAGAAGCCCTAATGTTGCTAGAGGAAGAAAGCGGAAGCAAGATTCTGTTGATACGGAGAAGAATGTGCTT CCCTCTGACAACCTTTTAAGTTTCAATATTCCACCAGCATTAAGGAAGCAACTTCTTGACGATTTTGAATTTGTTACTCA GATGCAGAAGCTTGTGCAACTTCCGCGTTCTCCAAATGTGGATGGCATCTTGAAGAAGTACATTGACAGCCAAATGAAGA AACATGGCAGGGTAACAGATTCATTAGAGGAAATTCTGAAAGGCTTGCGTTGCTACTTTGACAAAGCTTTACCGGTGATG TTGCTTTACAACAATGAACGGAAGCAGTACGAGGAATCCGTATCAGGGGGTGTTTCTCCTTCAACTGTGTACGGAGCAGA GCATTTGTTGCGACTCTTTGTGAAATTACCGGAGTTGCTAGTACATGTGAATATGGCAGAAGAGACATTGAAGGAATTGC AGGACAACTTTGTTGATATTCTCAGGTTCTTGAGGAAGAATCAGAGTGTGCTTTTTGTATCGACATACAAAGCAGTGGAA GAAATGGAGAAGAAAGAAGGTTAG |
Microexon DNA seq | GGTTGGAACAAAAG |
Microexon Amino Acid seq | GWNKS |
Microexon-tag DNA Seq | AAAGTTGAATTTAAAGACAATGAATGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTCAGAT |
Microexon-tag Amino Acid seq | KVEFKDNEWKYFVHYIGWNKSWDEWIRLDCLLKHSD |
Transcript ID | AT1G02740.1 |
Gene ID | At.188 |
Gene Name | MRG2 |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.8e-11 |
Motif start | 53 |
Motif end | 101 |
Protein seq | >AT1G02740.1 MGSPNAAAETDLTTDDFIGDTRRDSGSDTETNTDCDGEDLPLLLLPAPPGHFEEGERVLAKHSDCFYEAKVLKVEFKDNE WKYFVHYIGWNKSWDEWIRLDCLLKHSDENIEKQKEQGLKQQGIKSAMAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVL PSDNLLSFNIPPALRKQLLDDFEFVTQMQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVM LLYNNERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFLRKNQSVLFVSTYKAVE EMEKKEG* |
CDS seq | >AT1G02740.1 ATGGGAAGCCCTAACGCCGCCGCCGAGACGGATCTAACAACCGATGATTTCATCGGAGACACACGACGGGACTCTGGTTC TGATACAGAGACCAACACCGATTGTGACGGAGAAGATTTGCCTCTTCTTCTGCTACCTGCTCCTCCCGGCCACTTCGAAG AAGGAGAGAGAGTTTTAGCCAAACACAGTGATTGCTTCTACGAAGCCAAGGTTCTTAAAGTTGAATTTAAAGACAATGAA TGGAAATATTTTGTGCATTACATTGGTTGGAACAAAAGTTGGGACGAATGGATAAGGCTGGACTGTCTGTTGAAACATTC AGATGAGAATATTGAGAAACAGAAAGAACAGGGTTTGAAACAGCAAGGGATTAAGAGTGCTATGGCTTGGAAAGTGTCAA AGATGAAACCTAGAAGCCCTAATGTTGCTAGAGGAAGAAAGCGGAAGCAAGATTCTGTTGATACGGAGAAGAATGTGCTT CCCTCTGACAACCTTTTAAGTTTCAATATTCCACCAGCATTAAGGAAGCAACTTCTTGACGATTTTGAATTTGTTACTCA GATGCAGAAGCTTGTGCAACTTCCGCGTTCTCCAAATGTGGATGGCATCTTGAAGAAGTACATTGACAGCCAAATGAAGA AACATGGCAGGGTAACAGATTCATTAGAGGAAATTCTGAAAGGCTTGCGTTGCTACTTTGACAAAGCTTTACCGGTGATG TTGCTTTACAACAATGAACGGAAGCAGTACGAGGAATCCGTATCAGGGGGTGTTTCTCCTTCAACTGTGTACGGAGCAGA GCATTTGTTGCGACTCTTTGTGAAATTACCGGAGTTGCTAGTACATGTGAATATGGCAGAAGAGACATTGAAGGAATTGC AGGACAACTTTGTTGATATTCTCAGGTTCTTGAGGAAGAATCAGAGTGTGCTTTTTGTATCGACATACAAAGCAGTGGAA GAAATGGAGAAGAAAGAAGGTTAG |