Microexon ID Zm_10:15574035-15574048:+
Species Zea mays
Coordinates 10:15574035..15574048
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Zm_10:15574035-15574048:+ does not have available information here.
Transcript ID Zm00001d023689_T001
Protein ID NA
Gene ID Zm00001d023689
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq
Microexon DNA seq AGGAAGTCTGATGA
Microexon Amino Acid seq RKSDD
Microexon-tag DNA Seq CCTGGCACAACAGCATTATACAGAGCTACCGTAGCTTCTCATCGTAAGAGGAAGTCTGATGATTATATTCTGGAGTTCGATGACGATGAGGAGGACGGTGCTCTGCCG
Microexon-tag Amino Acid seq PGTTALYRATVASHRKRKSDDYILEFDDDEEDGALP
Transcript ID Zm00001d023689_T002
Gene ID Zm.6255
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 1.9e-34
Motif start 142
Motif end 273
Protein seq >Zm00001d023689_T002
MSSSVGGGSAGGGGVDMVSLLEKAKDLDQLKKEQDEIVADINKIHKKLLASPEMVDKPVDTILLKLRGLYARAKELSENE
ISASNALIGLLDGLLQSGASTAQKKKIEVGEQKKKRIKSDTDSARFSAASMRNQLDQAASLKGEQVAARVKSDDEKDEWF
VVKVIHFDKETKEYEVLDEEPGDDEESTQKKYKLPMSYIIPFPKKGDPSSAPDFGQGRQVLAVYPGTTALYRATVASHRK
RKSDDYILEFDDDEEDGALPQRAVPFYRVVALPEGHRQ*
CDS seq >Zm00001d023689_T002
ATGTCGTCGTCGGTTGGGGGCGGCAGCGCGGGCGGCGGCGGAGTGGACATGGTCAGCCTGCTGGAGAAGGCCAAGGATTT
GGACCAGCTAAAGAAGGAACAGGACGAAATCGTTGCCGATATCAACAAGATTCACAAGAAGCTCCTCGCATCCCCAGAGA
TGGTTGATAAACCAGTTGACACCATTTTGCTCAAGCTTCGTGGTTTATATGCACGTGCAAAGGAGCTCTCTGAGAATGAA
ATCAGTGCCTCAAATGCTTTGATTGGATTATTAGATGGTTTGTTGCAATCTGGAGCTTCAACTGCACAAAAGAAAAAGAT
AGAAGTTGGTGAGCAGAAAAAGAAGAGGATCAAGTCTGATACAGATTCTGCACGATTTTCTGCTGCATCTATGAGGAATC
AACTTGACCAAGCTGCAAGCCTTAAAGGAGAGCAGGTTGCTGCTAGGGTAAAATCAGATGACGAAAAAGATGAGTGGTTT
GTCGTGAAGGTCATACATTTCGATAAGGAAACAAAAGAGTATGAAGTACTTGATGAAGAACCAGGTGATGACGAAGAGAG
CACTCAAAAGAAGTACAAGTTGCCTATGTCTTACATTATTCCATTTCCGAAGAAAGGGGATCCTTCGAGTGCCCCGGATT
TTGGGCAGGGTCGACAAGTTTTAGCTGTTTATCCTGGCACAACAGCATTATACAGAGCTACCGTAGCTTCTCATCGTAAG
AGGAAGTCTGATGATTATATTCTGGAGTTCGATGACGATGAGGAGGACGGTGCTCTGCCGCAGAGAGCCGTGCCGTTCTA
CAGGGTGGTTGCCCTGCCGGAGGGCCACAGGCAGTAG