
Microexon ID | Zm_10:15574035-15574048:+ |
Species | Zea mays | Coordinates | 10:15574035..15574048 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_10:15574035-15574048:+ does not have available information here.
Transcript ID | Zm00001d023689_T001 |
Protein ID | NA |
Gene ID | Zm00001d023689 |
Gene Name | NA |
Pfam domain motif | NA |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | |
CDS seq |
Microexon DNA seq | AGGAAGTCTGATGA |
Microexon Amino Acid seq | RKSDD |
Microexon-tag DNA Seq | CCTGGCACAACAGCATTATACAGAGCTACCGTAGCTTCTCATCGTAAGAGGAAGTCTGATGATTATATTCTGGAGTTCGATGACGATGAGGAGGACGGTGCTCTGCCG |
Microexon-tag Amino Acid seq | PGTTALYRATVASHRKRKSDDYILEFDDDEEDGALP |
Transcript ID | Zm00001d023689_T002 |
Gene ID | Zm.6255 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 1.9e-34 |
Motif start | 142 |
Motif end | 273 |
Protein seq | >Zm00001d023689_T002 MSSSVGGGSAGGGGVDMVSLLEKAKDLDQLKKEQDEIVADINKIHKKLLASPEMVDKPVDTILLKLRGLYARAKELSENE ISASNALIGLLDGLLQSGASTAQKKKIEVGEQKKKRIKSDTDSARFSAASMRNQLDQAASLKGEQVAARVKSDDEKDEWF VVKVIHFDKETKEYEVLDEEPGDDEESTQKKYKLPMSYIIPFPKKGDPSSAPDFGQGRQVLAVYPGTTALYRATVASHRK RKSDDYILEFDDDEEDGALPQRAVPFYRVVALPEGHRQ* |
CDS seq | >Zm00001d023689_T002 ATGTCGTCGTCGGTTGGGGGCGGCAGCGCGGGCGGCGGCGGAGTGGACATGGTCAGCCTGCTGGAGAAGGCCAAGGATTT GGACCAGCTAAAGAAGGAACAGGACGAAATCGTTGCCGATATCAACAAGATTCACAAGAAGCTCCTCGCATCCCCAGAGA TGGTTGATAAACCAGTTGACACCATTTTGCTCAAGCTTCGTGGTTTATATGCACGTGCAAAGGAGCTCTCTGAGAATGAA ATCAGTGCCTCAAATGCTTTGATTGGATTATTAGATGGTTTGTTGCAATCTGGAGCTTCAACTGCACAAAAGAAAAAGAT AGAAGTTGGTGAGCAGAAAAAGAAGAGGATCAAGTCTGATACAGATTCTGCACGATTTTCTGCTGCATCTATGAGGAATC AACTTGACCAAGCTGCAAGCCTTAAAGGAGAGCAGGTTGCTGCTAGGGTAAAATCAGATGACGAAAAAGATGAGTGGTTT GTCGTGAAGGTCATACATTTCGATAAGGAAACAAAAGAGTATGAAGTACTTGATGAAGAACCAGGTGATGACGAAGAGAG CACTCAAAAGAAGTACAAGTTGCCTATGTCTTACATTATTCCATTTCCGAAGAAAGGGGATCCTTCGAGTGCCCCGGATT TTGGGCAGGGTCGACAAGTTTTAGCTGTTTATCCTGGCACAACAGCATTATACAGAGCTACCGTAGCTTCTCATCGTAAG AGGAAGTCTGATGATTATATTCTGGAGTTCGATGACGATGAGGAGGACGGTGCTCTGCCGCAGAGAGCCGTGCCGTTCTA CAGGGTGGTTGCCCTGCCGGAGGGCCACAGGCAGTAG |