Microexon ID Sm_GL377594:1696167-1696180:-
Species Selaginella moellendorffii
Coordinates GL377594:1696167..1696180
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAAAAACGGACGA
Microexon Amino Acid seq KKTDD
Microexon-tag DNA Seq GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA
Microexon-tag Amino Acid Seq GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP
Microexon-tag spanning region1696056-1696314
Microexon-tag prediction score0.9145
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ23087x
Reference Transcript ID EFJ23087
Gene ID SELMODRAFT_151073
Gene Name NA
Transcript ID EFJ23087
Protein ID EFJ23087
Gene ID SELMODRAFT_151073
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.1e-32
Motif start 139
Motif end 272
Protein seq >EFJ23087
MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN
ACLSNLDTLSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNSPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVK
VTRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKK
KTDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ*
CDS seq >EFJ23087
ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA
ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG
AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTACAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT
GCTTGTCTAAGCAATCTGGACACTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA
TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATTCTCCGAACGTTTCTCGGTCGGCTGATTCAA
TTGGTAAAGCTGTTGGAGACCAGGTCGCCGCGAGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAG
GTGACGCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAAC
CGGTGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAA
CGGGATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAA
AAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCA
CGTTGTCACTCTTCCGGAGGGGCACCGGCAGTAA
Microexon DNA seq AAAAAAACGGACGA
Microexon Amino Acid seq KKTDD
Microexon-tag DNA Seq GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA
Microexon-tag Amino Acid seq GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP
Transcript ID Sm.15058.1
Gene ID Sm.15058
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.1e-32
Motif start 139
Motif end 272
Protein seq >Sm.15058.1
MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN
ACLSNLDTLSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNSPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVK
VTRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKK
KTDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ*
CDS seq >Sm.15058.1
ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA
ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG
AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTACAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT
GCTTGTCTAAGCAATCTGGACACTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA
TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATTCTCCGAACGTTTCTCGGTCGGCTGATTCAA
TTGGTAAAGCTGTTGGAGACCAGGTCGCCGCGAGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAG
GTGACGCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAAC
CGGTGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAA
CGGGATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAA
AAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCA
CGTTGTCACTCTTCCGGAGGGGCACCGGCAGTAA