
Microexon ID | Sm_GL377575:1682396-1682409:+ |
Species | Selaginella moellendorffii | Coordinates | GL377575:1682396..1682409 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAAAAACGGACGA |
Microexon Amino Acid seq | KKTDD |
Microexon-tag DNA Seq | GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA |
Microexon-tag Amino Acid Seq | GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP |
Microexon-tag spanning region | 1682263-1682520 |
Microexon-tag prediction score | 0.9145 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ30448x |
Reference Transcript ID | EFJ30448 |
Gene ID | SELMODRAFT_89941 |
Gene Name | NA |
Transcript ID | EFJ30448 |
Protein ID | EFJ30448 |
Gene ID | SELMODRAFT_89941 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.1e-32 |
Motif start | 138 |
Motif end | 271 |
Protein seq | >EFJ30448 MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN ACLSNLDALSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVKV TRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKKK TDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ* |
CDS seq | >EFJ30448 ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTATAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT GCTTGTCTTAGTAATCTGGACGCTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATCCGAACGTTTCTCGGTCGGCTGATTCAATTG GTAAAGCTGTTGGAGACCAGGTCGCCGCGCGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAGGTG ACCCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAACCGG TGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAACGG GATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAA ACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCACGT TGTCACTCTTCCGGAGGGGCACCGCCAGTAA |
Microexon DNA seq | AAAAAAACGGACGA |
Microexon Amino Acid seq | KKTDD |
Microexon-tag DNA Seq | GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA |
Microexon-tag Amino Acid seq | GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP |
Transcript ID | Sm.7835.1 |
Gene ID | Sm.7835 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.1e-32 |
Motif start | 138 |
Motif end | 271 |
Protein seq | >Sm.7835.1 MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN ACLSNLDALSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVKV TRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKKK TDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ* |
CDS seq | >Sm.7835.1 ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTATAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT GCTTGTCTTAGTAATCTGGACGCTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATCCGAACGTTTCTCGGTCGGCTGATTCAATTG GTAAAGCTGTTGGAGACCAGGTCGCCGCGCGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAGGTG ACCCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAACCGG TGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAACGG GATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAA ACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCACGT TGTCACTCTTCCGGAGGGGCACCGCCAGTAA |