Microexon ID Sm_GL377575:1682396-1682409:+
Species Selaginella moellendorffii
Coordinates GL377575:1682396..1682409
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAAAAACGGACGA
Microexon Amino Acid seq KKTDD
Microexon-tag DNA Seq GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA
Microexon-tag Amino Acid Seq GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP
Microexon-tag spanning region1682263-1682520
Microexon-tag prediction score0.9145
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ30448x
Reference Transcript ID EFJ30448
Gene ID SELMODRAFT_89941
Gene Name NA
Transcript ID EFJ30448
Protein ID EFJ30448
Gene ID SELMODRAFT_89941
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.1e-32
Motif start 138
Motif end 271
Protein seq >EFJ30448
MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN
ACLSNLDALSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVKV
TRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKKK
TDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ*
CDS seq >EFJ30448
ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA
ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG
AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTATAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT
GCTTGTCTTAGTAATCTGGACGCTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA
TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATCCGAACGTTTCTCGGTCGGCTGATTCAATTG
GTAAAGCTGTTGGAGACCAGGTCGCCGCGCGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAGGTG
ACCCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAACCGG
TGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAACGG
GATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAA
ACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCACGT
TGTCACTCTTCCGGAGGGGCACCGCCAGTAA
Microexon DNA seq AAAAAAACGGACGA
Microexon Amino Acid seq KKTDD
Microexon-tag DNA Seq GGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAAACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCA
Microexon-tag Amino Acid seq GTTALYKATVVGPHRKKKTDDYILEFDDDDEDGFLP
Transcript ID Sm.7835.1
Gene ID Sm.7835
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.1e-32
Motif start 138
Motif end 271
Protein seq >Sm.7835.1
MASNALSAASVEAASQGLKELDRLRREQDGLIKKINKIHAKLAETQPEQAEKFEDKFWSKLRDLYSQAKALADAEESASN
ACLSNLDALSIPSQAAAAHRRKTETGDQKRKRAKADADSSRLNPNVSRSADSIGKAVGDQVAARITPEDSEKSEWIVVKV
TRFDRETNKYEVIDEEPGDEEENGGTGGPRKYKLSPSAIIQFPKPATALDFPTGSQVLAVYPGTTALYKATVVGPHRKKK
TDDYILEFDDDDEDGFLPKRTVPFYHVVTLPEGHRQ*
CDS seq >Sm.7835.1
ATGGCGAGCAATGCATTGAGCGCGGCGAGCGTGGAGGCCGCGTCGCAAGGGCTCAAGGAGCTGGATCGATTGAGGAGAGA
ACAAGATGGTCTGATCAAGAAGATCAATAAGATCCACGCCAAGCTCGCAGAGACCCAACCAGAGCAAGCCGAGAAGTTCG
AAGATAAGTTCTGGAGCAAGCTACGGGATTTGTATAGTCAAGCTAAAGCACTTGCGGACGCCGAAGAAAGTGCGTCAAAT
GCTTGTCTTAGTAATCTGGACGCTCTCTCGATACCTTCACAAGCTGCTGCTGCTCATCGACGTAAAACTGAGACTGGCGA
TCAAAAGCGGAAGAGAGCCAAGGCCGATGCAGACTCTTCCAGGCTGAATCCGAACGTTTCTCGGTCGGCTGATTCAATTG
GTAAAGCTGTTGGAGACCAGGTCGCCGCGCGGATTACTCCTGAAGATTCAGAGAAGAGCGAGTGGATTGTCGTCAAGGTG
ACCCGCTTTGATCGCGAAACAAACAAATATGAAGTGATAGACGAAGAGCCTGGGGACGAAGAAGAAAATGGTGGAACCGG
TGGACCGAGGAAGTACAAGTTATCTCCCTCCGCAATCATCCAATTCCCAAAACCAGCGACAGCGCTGGATTTTCCAACGG
GATCTCAAGTTCTTGCGGTGTATCCAGGCACCACCGCACTGTACAAAGCTACTGTCGTCGGTCCTCATAGAAAAAAAAAA
ACGGACGACTATATTCTAGAATTCGATGACGACGACGAGGATGGATTTCTACCAAAGCGAACAGTGCCATTTTACCACGT
TGTCACTCTTCCGGAGGGGCACCGCCAGTAA