
Microexon ID | Ps_NC_039362.1:27784179-27784192:- |
Species | Papaver somniferum | Coordinates | NC_039362.1:27784179..27784192 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGGAAAAACGACGC |
Microexon Amino Acid seq | RKNDA |
Microexon-tag DNA Seq | GGAACCACTGCATTGTATAAAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA |
Microexon-tag Amino Acid Seq | GTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTP |
Microexon-tag spanning region | 27783976-27784377 |
Microexon-tag prediction score | 0.932 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Ps_NC_039362.1:27784179-27784192:- does not have available information here.
Microexon DNA seq | AGGAAAAACGACGC |
Microexon Amino Acid seq | RKNDA |
Microexon-tag DNA Seq | GGAACCACTGCATTGTATAAAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA |
Microexon-tag Amino Acid seq | GTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTP |
Transcript ID | Ps.27784.1 |
Gene ID | Ps.27784 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 3.5e-33 |
Motif start | 12 |
Motif end | 146 |
Protein seq | >Ps.27784.1 MTNQLELAAGLKGEQVAARVTPDDAQRDEWFVVKVTHFDRETKEFEVFDVEPGDDEDGGSQRTYKLPMSRIIPFPKRNDP SNAPDYPTEKCVLAVYPGTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTPQRTVPFHKVVPLPEVLQVMKSMSTYRL WKLLAGIRI* |
CDS seq | >Ps.27784.1 ATGACAAACCAACTAGAGCTTGCGGCTGGTCTTAAGGGTGAACAGGTGGCAGCTAGAGTCACACCTGATGATGCTCAAAG GGATGAGTGGTTTGTTGTAAAAGTAACTCATTTCGATAGAGAAACAAAAGAATTTGAAGTATTTGATGTGGAGCCAGGTG ATGATGAAGATGGAGGCTCCCAGAGAACGTACAAGCTACCTATGTCACGGATTATTCCTTTCCCAAAGCGAAATGACCCC TCTAACGCACCTGATTACCCAACTGAGAAATGTGTTTTGGCAGTCTATCCTGGAACCACTGCATTGTATAAAGCAACCGT GGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCAC AAAGAACGGTACCCTTCCATAAGGTGGTTCCATTGCCAGAAGTCCTACAAGTCATGAAAAGCATGTCAACATACAGATTG TGGAAATTGTTGGCCGGTATACGAATATGA |