Microexon ID Ps_NC_039362.1:27784179-27784192:-
Species Papaver somniferum
Coordinates NC_039362.1:27784179..27784192
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGGAAAAACGACGC
Microexon Amino Acid seq RKNDA
Microexon-tag DNA Seq GGAACCACTGCATTGTATAAAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA
Microexon-tag Amino Acid Seq GTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTP
Microexon-tag spanning region27783976-27784377
Microexon-tag prediction score0.932
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Ps_NC_039362.1:27784179-27784192:- does not have available information here.
Microexon DNA seq AGGAAAAACGACGC
Microexon Amino Acid seq RKNDA
Microexon-tag DNA Seq GGAACCACTGCATTGTATAAAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA
Microexon-tag Amino Acid seq GTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTP
Transcript ID Ps.27784.1
Gene ID Ps.27784
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 3.5e-33
Motif start 12
Motif end 146
Protein seq >Ps.27784.1
MTNQLELAAGLKGEQVAARVTPDDAQRDEWFVVKVTHFDRETKEFEVFDVEPGDDEDGGSQRTYKLPMSRIIPFPKRNDP
SNAPDYPTEKCVLAVYPGTTALYKATVVNPHRKRKNDAYLLEFDDDEEYHSTPQRTVPFHKVVPLPEVLQVMKSMSTYRL
WKLLAGIRI*
CDS seq >Ps.27784.1
ATGACAAACCAACTAGAGCTTGCGGCTGGTCTTAAGGGTGAACAGGTGGCAGCTAGAGTCACACCTGATGATGCTCAAAG
GGATGAGTGGTTTGTTGTAAAAGTAACTCATTTCGATAGAGAAACAAAAGAATTTGAAGTATTTGATGTGGAGCCAGGTG
ATGATGAAGATGGAGGCTCCCAGAGAACGTACAAGCTACCTATGTCACGGATTATTCCTTTCCCAAAGCGAAATGACCCC
TCTAACGCACCTGATTACCCAACTGAGAAATGTGTTTTGGCAGTCTATCCTGGAACCACTGCATTGTATAAAGCAACCGT
GGTTAATCCTCATCGCAAGAGGAAAAACGACGCCTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCAC
AAAGAACGGTACCCTTCCATAAGGTGGTTCCATTGCCAGAAGTCCTACAAGTCATGAAAAGCATGTCAACATACAGATTG
TGGAAATTGTTGGCCGGTATACGAATATGA