Microexon ID Ps_NC_039361.1:145868303-145868316:-
Species Papaver somniferum
Coordinates NC_039361.1:145868303..145868316
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGGAAAAACGACGA
Microexon Amino Acid seq RKNDD
Microexon-tag DNA Seq GGAACCACTGCATTGTTTAGAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGACTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA
Microexon-tag Amino Acid Seq GTTALFRATVVNPHRKRKNDDYLLEFDDDEEYHSTP
Microexon-tag spanning region145868113-145868534
Microexon-tag prediction score0.9304
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026523752.1x
Reference Transcript ID XM_026523752.1
Gene ID NA
Gene Name NA
Transcript ID XM_026523752.1
Protein ID XP_026379537.1
Gene ID LOC113274338
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 1.3e-32
Motif start 29
Motif end 163
Protein seq >XP_026379537.1
MEQKTETVLSKYTPVVSMTNQLELAADLKGEEVAARFTPDDAQRDEWFVVKVTHFDRETKEFEVFDVEPGDDEDGGSQRT
YKLPMSRIIPFPKRNDPSNAPDYPTGKCVLAVYPGTTALFRATVVNPHRKRKNDDYLLEFDDDEEYHSTPQRTVPFHKVV
PLPEVLQVMKSMSTYRLWKLLAGIRI*
CDS seq >XM_026523752.1
ATGGAGCAGAAAACTGAGACAGTTCTATCAAAGTATACACCTGTTGTTTCCATGACAAACCAACTAGAGCTTGCGGCTGA
TCTTAAGGGTGAAGAGGTGGCAGCTAGATTCACACCTGATGATGCTCAGAGGGATGAGTGGTTTGTCGTAAAAGTAACTC
ATTTCGATAGAGAAACAAAAGAATTTGAAGTATTTGATGTGGAGCCAGGTGATGATGAAGATGGAGGCTCCCAGAGAACG
TACAAGCTACCTATGTCACGCATTATTCCTTTCCCAAAGCGAAATGACCCCTCTAACGCACCTGATTACCCAACTGGGAA
ATGTGTTTTGGCAGTCTATCCTGGAACCACTGCATTGTTTAGAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACG
ACGACTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCACAAAGAACGGTACCCTTCCATAAGGTGGTT
CCATTGCCAGAAGTCCTACAAGTCATGAAAAGCATGTCAACATACAGATTGTGGAAATTGTTGGCCGGTATACGAATATG
A
Microexon DNA seq AGGAAAAACGACGA
Microexon Amino Acid seq RKNDD
Microexon-tag DNA Seq GGAACCACTGCATTGTTTAGAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACGACGACTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCA
Microexon-tag Amino Acid seq GTTALFRATVVNPHRKRKNDDYLLEFDDDEEYHSTP
Transcript ID XM_026523752.1
Gene ID Ps.26452
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 1.3e-32
Motif start 29
Motif end 163
Protein seq >XM_026523752.1
MEQKTETVLSKYTPVVSMTNQLELAADLKGEEVAARFTPDDAQRDEWFVVKVTHFDRETKEFEVFDVEPGDDEDGGSQRT
YKLPMSRIIPFPKRNDPSNAPDYPTGKCVLAVYPGTTALFRATVVNPHRKRKNDDYLLEFDDDEEYHSTPQRTVPFHKVV
PLPEVLQVMKSMSTYRLWKLLAGIRI*
CDS seq >XM_026523752.1
ATGGAGCAGAAAACTGAGACAGTTCTATCAAAGTATACACCTGTTGTTTCCATGACAAACCAACTAGAGCTTGCGGCTGA
TCTTAAGGGTGAAGAGGTGGCAGCTAGATTCACACCTGATGATGCTCAGAGGGATGAGTGGTTTGTCGTAAAAGTAACTC
ATTTCGATAGAGAAACAAAAGAATTTGAAGTATTTGATGTGGAGCCAGGTGATGATGAAGATGGAGGCTCCCAGAGAACG
TACAAGCTACCTATGTCACGCATTATTCCTTTCCCAAAGCGAAATGACCCCTCTAACGCACCTGATTACCCAACTGGGAA
ATGTGTTTTGGCAGTCTATCCTGGAACCACTGCATTGTTTAGAGCAACCGTGGTTAATCCTCATCGCAAGAGGAAAAACG
ACGACTATTTACTGGAGTTTGATGATGATGAAGAATATCATTCGACGCCACAAAGAACGGTACCCTTCCATAAGGTGGTT
CCATTGCCAGAAGTCCTACAAGTCATGAAAAGCATGTCAACATACAGATTGTGGAAATTGTTGGCCGGTATACGAATATG
A