
Microexon ID | Pp_21:5043677-5043690:- |
Species | Physcomitrium patens | Coordinates | 21:5043677..5043690 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_21:5043677-5043690:- does not have available information here.
Transcript ID | Pp3c21_7830V3.1 |
Protein ID | Pp3c21_7830V3.1 |
Gene ID | Pp3c21_7830 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.1e-32 |
Motif start | 145 |
Motif end | 279 |
Protein seq | >Pp3c21_7830V3.1 MCDSAGGDRELQQPKGVMAALELANAALKEIERLRKEQEQVIRKINNYHSKLQQSPEQADNMKEDSWFKLRQYYMKAKSL AEEEATVSSNCVEHLAGLLPGQAASNRKKPDSNEKKRKRVRADDSTRLSSPTQRSTSAAYANLVPGDQVAARISSDGAEN DEWIVVKLTKHDREANRFEVIDEEPDDEGNGQRKYKLPPSQIIPFTKRSDVSNAPDFPVGSQVLAVYPGTTALYKASVVG PQRKKRSDEYSLEFDGDEEEGVAGLPTKIVPFYHVVQLPSGHRQ* |
CDS seq | >Pp3c21_7830V3.1 ATGTGCGACAGCGCTGGTGGTGATCGGGAGCTGCAGCAGCCAAAGGGGGTGATGGCCGCACTAGAGTTGGCCAATGCGGC CTTGAAGGAAATCGAGAGGCTTCGCAAAGAACAGGAGCAAGTCATACGCAAAATTAACAATTATCATTCCAAGCTCCAGC AGTCTCCTGAACAAGCGGACAATATGAAGGAGGATTCCTGGTTTAAGCTACGACAATACTACATGAAGGCGAAGAGCTTG GCTGAGGAAGAAGCAACTGTTTCCTCTAATTGCGTGGAGCATCTTGCCGGTCTATTACCTGGTCAAGCGGCATCCAACCG CAAGAAACCAGATTCTAATGAGAAGAAACGAAAGCGGGTTAGAGCAGATGATTCTACACGACTGTCGTCTCCCACTCAAC GAAGTACGAGTGCTGCATATGCTAATTTAGTACCTGGAGACCAGGTAGCAGCTCGTATCTCAAGCGATGGTGCAGAAAAT GATGAGTGGATCGTGGTGAAATTGACGAAGCATGACCGGGAAGCAAACAGGTTTGAAGTGATTGACGAAGAGCCTGACGA TGAAGGAAATGGCCAAAGGAAGTACAAGCTGCCTCCTTCACAGATTATCCCTTTTACGAAGAGGTCAGATGTGTCCAACG CACCAGATTTTCCTGTAGGAAGCCAAGTGCTGGCTGTTTACCCTGGTACAACTGCACTATACAAAGCATCGGTTGTTGGT CCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGGCCTCCCAAC AAAGATCGTCCCCTTCTACCACGTTGTGCAATTACCAAGTGGGCACCGGCAATGA |
Microexon DNA seq | AAACGAAGTGACGA |
Microexon Amino Acid seq | KRSDE |
Microexon-tag DNA Seq | GGTACAACTGCACTATACAAAGCATCGGTTGTTGGTCCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGGC |
Microexon-tag Amino Acid seq | GTTALYKASVVGPQRKKRSDEYSLEFDGDEEEGVAG |
Transcript ID | Pp.13385.1 |
Gene ID | Pp.13385 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 1.3e-30 |
Motif start | 145 |
Motif end | 282 |
Protein seq | >Pp.13385.1 MCDSAGGDRELQQPKGVMAALELANAALKEIERLRKEQEQVIRKINNYHSKLQQSPEQADNMKEDSWFKLRQYYMKAKSL AEEEATVSSNCVEHLAGLLPGQAASNRKKPDSNEKKRKRVRADDSTRLSSPTQRSTSAAYANLVPGDQVAARISSDGAEN DEWIVVKLTKHDREANRFEVIDEEPDDEGNGQSILRKYKLPPSQIIPFTKRSDVSNAPDFPVGSQVLAVYPGTTALYKAS VVGPQRKKRSDEYSLEFDGDEEEGVAGLPTKIVPFYHVVQLPSGHRQ* |
CDS seq | >Pp.13385.1 ATGTGCGACAGCGCTGGTGGTGATCGGGAGCTGCAGCAGCCAAAGGGGGTGATGGCCGCACTAGAGTTGGCCAATGCGGC CTTGAAGGAAATCGAGAGGCTTCGCAAAGAACAGGAGCAAGTCATACGCAAAATTAACAATTATCATTCCAAGCTCCAGC AGTCTCCTGAACAAGCGGACAATATGAAGGAGGATTCCTGGTTTAAGCTACGACAATACTACATGAAGGCGAAGAGCTTG GCTGAGGAAGAAGCAACTGTTTCCTCTAATTGCGTGGAGCATCTTGCCGGTCTATTACCTGGTCAAGCGGCATCCAACCG CAAGAAACCAGATTCTAATGAGAAGAAACGAAAGCGGGTTAGAGCAGATGATTCTACACGACTGTCGTCTCCCACTCAAC GAAGTACGAGTGCTGCATATGCTAATTTAGTACCTGGAGACCAGGTAGCAGCTCGTATCTCAAGCGATGGTGCAGAAAAT GATGAGTGGATCGTGGTGAAATTGACGAAGCATGACCGGGAAGCAAACAGGTTTGAAGTGATTGACGAAGAGCCTGACGA TGAAGGAAATGGCCAAAGCATACTCAGGAAGTACAAGCTGCCTCCTTCACAGATTATCCCTTTTACGAAGAGGTCAGATG TGTCCAACGCACCAGATTTTCCTGTAGGAAGCCAAGTGCTGGCTGTTTACCCTGGTACAACTGCACTATACAAAGCATCG GTTGTTGGTCCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGG CCTCCCAACAAAGATCGTCCCCTTCTACCACGTTGTGCAATTACCAAGTGGGCACCGGCAATGA |