Microexon ID Pp_21:5043677-5043690:-
Species Physcomitrium patens
Coordinates 21:5043677..5043690
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Pp_21:5043677-5043690:- does not have available information here.
Transcript ID Pp3c21_7830V3.1
Protein ID Pp3c21_7830V3.1
Gene ID Pp3c21_7830
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.1e-32
Motif start 145
Motif end 279
Protein seq >Pp3c21_7830V3.1
MCDSAGGDRELQQPKGVMAALELANAALKEIERLRKEQEQVIRKINNYHSKLQQSPEQADNMKEDSWFKLRQYYMKAKSL
AEEEATVSSNCVEHLAGLLPGQAASNRKKPDSNEKKRKRVRADDSTRLSSPTQRSTSAAYANLVPGDQVAARISSDGAEN
DEWIVVKLTKHDREANRFEVIDEEPDDEGNGQRKYKLPPSQIIPFTKRSDVSNAPDFPVGSQVLAVYPGTTALYKASVVG
PQRKKRSDEYSLEFDGDEEEGVAGLPTKIVPFYHVVQLPSGHRQ*
CDS seq >Pp3c21_7830V3.1
ATGTGCGACAGCGCTGGTGGTGATCGGGAGCTGCAGCAGCCAAAGGGGGTGATGGCCGCACTAGAGTTGGCCAATGCGGC
CTTGAAGGAAATCGAGAGGCTTCGCAAAGAACAGGAGCAAGTCATACGCAAAATTAACAATTATCATTCCAAGCTCCAGC
AGTCTCCTGAACAAGCGGACAATATGAAGGAGGATTCCTGGTTTAAGCTACGACAATACTACATGAAGGCGAAGAGCTTG
GCTGAGGAAGAAGCAACTGTTTCCTCTAATTGCGTGGAGCATCTTGCCGGTCTATTACCTGGTCAAGCGGCATCCAACCG
CAAGAAACCAGATTCTAATGAGAAGAAACGAAAGCGGGTTAGAGCAGATGATTCTACACGACTGTCGTCTCCCACTCAAC
GAAGTACGAGTGCTGCATATGCTAATTTAGTACCTGGAGACCAGGTAGCAGCTCGTATCTCAAGCGATGGTGCAGAAAAT
GATGAGTGGATCGTGGTGAAATTGACGAAGCATGACCGGGAAGCAAACAGGTTTGAAGTGATTGACGAAGAGCCTGACGA
TGAAGGAAATGGCCAAAGGAAGTACAAGCTGCCTCCTTCACAGATTATCCCTTTTACGAAGAGGTCAGATGTGTCCAACG
CACCAGATTTTCCTGTAGGAAGCCAAGTGCTGGCTGTTTACCCTGGTACAACTGCACTATACAAAGCATCGGTTGTTGGT
CCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGGCCTCCCAAC
AAAGATCGTCCCCTTCTACCACGTTGTGCAATTACCAAGTGGGCACCGGCAATGA
Microexon DNA seq AAACGAAGTGACGA
Microexon Amino Acid seq KRSDE
Microexon-tag DNA Seq GGTACAACTGCACTATACAAAGCATCGGTTGTTGGTCCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGGC
Microexon-tag Amino Acid seq GTTALYKASVVGPQRKKRSDEYSLEFDGDEEEGVAG
Transcript ID Pp.13385.1
Gene ID Pp.13385
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 1.3e-30
Motif start 145
Motif end 282
Protein seq >Pp.13385.1
MCDSAGGDRELQQPKGVMAALELANAALKEIERLRKEQEQVIRKINNYHSKLQQSPEQADNMKEDSWFKLRQYYMKAKSL
AEEEATVSSNCVEHLAGLLPGQAASNRKKPDSNEKKRKRVRADDSTRLSSPTQRSTSAAYANLVPGDQVAARISSDGAEN
DEWIVVKLTKHDREANRFEVIDEEPDDEGNGQSILRKYKLPPSQIIPFTKRSDVSNAPDFPVGSQVLAVYPGTTALYKAS
VVGPQRKKRSDEYSLEFDGDEEEGVAGLPTKIVPFYHVVQLPSGHRQ*
CDS seq >Pp.13385.1
ATGTGCGACAGCGCTGGTGGTGATCGGGAGCTGCAGCAGCCAAAGGGGGTGATGGCCGCACTAGAGTTGGCCAATGCGGC
CTTGAAGGAAATCGAGAGGCTTCGCAAAGAACAGGAGCAAGTCATACGCAAAATTAACAATTATCATTCCAAGCTCCAGC
AGTCTCCTGAACAAGCGGACAATATGAAGGAGGATTCCTGGTTTAAGCTACGACAATACTACATGAAGGCGAAGAGCTTG
GCTGAGGAAGAAGCAACTGTTTCCTCTAATTGCGTGGAGCATCTTGCCGGTCTATTACCTGGTCAAGCGGCATCCAACCG
CAAGAAACCAGATTCTAATGAGAAGAAACGAAAGCGGGTTAGAGCAGATGATTCTACACGACTGTCGTCTCCCACTCAAC
GAAGTACGAGTGCTGCATATGCTAATTTAGTACCTGGAGACCAGGTAGCAGCTCGTATCTCAAGCGATGGTGCAGAAAAT
GATGAGTGGATCGTGGTGAAATTGACGAAGCATGACCGGGAAGCAAACAGGTTTGAAGTGATTGACGAAGAGCCTGACGA
TGAAGGAAATGGCCAAAGCATACTCAGGAAGTACAAGCTGCCTCCTTCACAGATTATCCCTTTTACGAAGAGGTCAGATG
TGTCCAACGCACCAGATTTTCCTGTAGGAAGCCAAGTGCTGGCTGTTTACCCTGGTACAACTGCACTATACAAAGCATCG
GTTGTTGGTCCTCAACGCAAGAAACGAAGTGACGAGTATTCTCTGGAGTTTGATGGCGATGAAGAAGAAGGAGTAGCTGG
CCTCCCAACAAAGATCGTCCCCTTCTACCACGTTGTGCAATTACCAAGTGGGCACCGGCAATGA