Microexon ID Os_12:11219719-11219732:-
Species Oryza sativa
Coordinates 12:11219719..11219732
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Os_12:11219719-11219732:- does not have available information here.
Transcript ID Os12t0290600-01
Protein ID Os12t0290600-01
Gene ID Os12g0290600
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 6.3e-35
Motif start 149
Motif end 280
Protein seq >Os12t0290600-01
MSSSVGGGGGGGAGGGGGGGGADIASLLDKAKELDQLRKEQDEVVTEINKMHKKILSSPEMVDKQVDATLIRLRALYTRA
KELCESEVSASSALVGLLDGLLQSGTSAAQRKKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVAAKVKSD
EEKDEWFVVKVIHFDKETKEYEVLDEEPGDDEESAQKKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRA
TVASNRKRKSDDYLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ*
CDS seq >Os12t0290600-01
ATGTCGTCGTCGGTCGGAGGCGGAGGGGGAGGTGGCGCGGGCGGCGGCGGCGGTGGCGGAGGAGCGGACATTGCGAGCCT
GCTGGATAAGGCCAAGGAGCTGGACCAGCTGCGCAAGGAGCAGGACGAGGTGGTCACCGAGATCAACAAGATGCACAAGA
AGATCCTCTCCTCTCCAGAGATGGTTGATAAACAGGTTGATGCTACGTTGATTCGGCTTCGTGCTTTATATACACGTGCC
AAAGAACTTTGTGAGAGTGAAGTCAGTGCATCGTCTGCTTTGGTTGGACTATTGGATGGTTTGTTGCAATCTGGAACTTC
AGCTGCACAACGAAAAAAGATAGAAGTTGGTGAGCAGAAAAAGAAGAGGATGAAGTCTGATACAGATACTACACGATTCT
CCTCTGCATCTATGAGGAGCCAACTTGACCAAGCTACAAACCTGAAAGGAGAACAGGTTGCAGCTAAGGTCAAATCAGAC
GAAGAAAAAGATGAATGGTTTGTGGTGAAGGTGATACATTTCGATAAGGAAACAAAAGAATATGAGGTACTTGATGAGGA
GCCAGGTGACGATGAAGAGAGTGCCCAAAAGAAGTACAAGTTGCCTATGTCAGATATTATTCCATTTCCAAAGAGAGGGG
ATCCTTCCAGTGCCCCAGATTTTGGGCAGGGTCGACAAGTCTTAGCTGTTTATCCTAGCACAACAGCACTATATAGAGCT
ACTGTTGCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACC
ACAAAGAGCTGTGCCGTTCTATAGAGTGGTTCCTCTCCCGGAGGGCCACCGGCAGTGA
Microexon DNA seq AGGAAATCTGACGA
Microexon Amino Acid seq RKSDD
Microexon-tag DNA Seq CCTAGCACAACAGCACTATATAGAGCTACTGTTGCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACCA
Microexon-tag Amino Acid seq PSTTALYRATVASNRKRKSDDYLLLFDDDEEDGNLP
Transcript ID Os.11097.1
Gene ID Os.11097
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 6.3e-35
Motif start 147
Motif end 278
Protein seq >Os.11097.1
MSSSRAGGEGGRGGGRRGQGYMEHLLEKLNHLDQLQKDQDSITEKINEIHKILRFSPEMVDKQVDATLIRLRALYTRAKE
LCESEVSASSALVGLLDGLLQSGTSAAQRKKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVAAKVKSDEE
KDEWFVVKVIHFDKETKEYEVLDEEPGDDEESAQKKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRATV
ASNRKRKSDDYLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ*
CDS seq >Os.11097.1
ATGTCATCGTCTAGGGCAGGGGGAGAGGGAGGGCGAGGAGGAGGAAGAAGAGGGCAAGGTTACATGGAGCACCTGCTTGA
GAAGTTGAATCACCTGGATCAGCTGCAGAAAGATCAGGACAGCATCACCGAGAAGATCAATGAAATCCACAAAATACTCC
GCTTCTCTCCAGAGATGGTTGATAAACAGGTTGATGCTACGTTGATTCGGCTTCGTGCTTTATATACACGTGCCAAAGAA
CTTTGTGAGAGTGAAGTCAGTGCATCGTCTGCTTTGGTTGGACTATTGGATGGTTTGTTGCAATCTGGAACTTCAGCTGC
ACAACGAAAAAAGATAGAAGTTGGTGAGCAGAAAAAGAAGAGGATGAAGTCTGATACAGATACTACACGATTCTCCTCTG
CATCTATGAGGAGCCAACTTGACCAAGCTACAAACCTGAAAGGAGAACAGGTTGCAGCTAAGGTCAAATCAGACGAAGAA
AAAGATGAATGGTTTGTGGTGAAGGTGATACATTTCGATAAGGAAACAAAAGAATATGAGGTACTTGATGAGGAGCCAGG
TGACGATGAAGAGAGTGCCCAAAAGAAGTACAAGTTGCCTATGTCAGATATTATTCCATTTCCAAAGAGAGGGGATCCTT
CCAGTGCCCCAGATTTTGGGCAGGGTCGACAAGTCTTAGCTGTTTATCCTAGCACAACAGCACTATATAGAGCTACTGTT
GCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACCACAAAG
AGCTGTGCCGTTCTATAGAGTGGTTCCTCTCCCGGAGGGCCACCGGCAGTGA