
Microexon ID | Os_12:11219719-11219732:- |
Species | Oryza sativa | Coordinates | 12:11219719..11219732 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Os_12:11219719-11219732:- does not have available information here.
Transcript ID | Os12t0290600-01 |
Protein ID | Os12t0290600-01 |
Gene ID | Os12g0290600 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 6.3e-35 |
Motif start | 149 |
Motif end | 280 |
Protein seq | >Os12t0290600-01 MSSSVGGGGGGGAGGGGGGGGADIASLLDKAKELDQLRKEQDEVVTEINKMHKKILSSPEMVDKQVDATLIRLRALYTRA KELCESEVSASSALVGLLDGLLQSGTSAAQRKKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVAAKVKSD EEKDEWFVVKVIHFDKETKEYEVLDEEPGDDEESAQKKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRA TVASNRKRKSDDYLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ* |
CDS seq | >Os12t0290600-01 ATGTCGTCGTCGGTCGGAGGCGGAGGGGGAGGTGGCGCGGGCGGCGGCGGCGGTGGCGGAGGAGCGGACATTGCGAGCCT GCTGGATAAGGCCAAGGAGCTGGACCAGCTGCGCAAGGAGCAGGACGAGGTGGTCACCGAGATCAACAAGATGCACAAGA AGATCCTCTCCTCTCCAGAGATGGTTGATAAACAGGTTGATGCTACGTTGATTCGGCTTCGTGCTTTATATACACGTGCC AAAGAACTTTGTGAGAGTGAAGTCAGTGCATCGTCTGCTTTGGTTGGACTATTGGATGGTTTGTTGCAATCTGGAACTTC AGCTGCACAACGAAAAAAGATAGAAGTTGGTGAGCAGAAAAAGAAGAGGATGAAGTCTGATACAGATACTACACGATTCT CCTCTGCATCTATGAGGAGCCAACTTGACCAAGCTACAAACCTGAAAGGAGAACAGGTTGCAGCTAAGGTCAAATCAGAC GAAGAAAAAGATGAATGGTTTGTGGTGAAGGTGATACATTTCGATAAGGAAACAAAAGAATATGAGGTACTTGATGAGGA GCCAGGTGACGATGAAGAGAGTGCCCAAAAGAAGTACAAGTTGCCTATGTCAGATATTATTCCATTTCCAAAGAGAGGGG ATCCTTCCAGTGCCCCAGATTTTGGGCAGGGTCGACAAGTCTTAGCTGTTTATCCTAGCACAACAGCACTATATAGAGCT ACTGTTGCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACC ACAAAGAGCTGTGCCGTTCTATAGAGTGGTTCCTCTCCCGGAGGGCCACCGGCAGTGA |
Microexon DNA seq | AGGAAATCTGACGA |
Microexon Amino Acid seq | RKSDD |
Microexon-tag DNA Seq | CCTAGCACAACAGCACTATATAGAGCTACTGTTGCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACCA |
Microexon-tag Amino Acid seq | PSTTALYRATVASNRKRKSDDYLLLFDDDEEDGNLP |
Transcript ID | Os.11097.1 |
Gene ID | Os.11097 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 6.3e-35 |
Motif start | 147 |
Motif end | 278 |
Protein seq | >Os.11097.1 MSSSRAGGEGGRGGGRRGQGYMEHLLEKLNHLDQLQKDQDSITEKINEIHKILRFSPEMVDKQVDATLIRLRALYTRAKE LCESEVSASSALVGLLDGLLQSGTSAAQRKKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVAAKVKSDEE KDEWFVVKVIHFDKETKEYEVLDEEPGDDEESAQKKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRATV ASNRKRKSDDYLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ* |
CDS seq | >Os.11097.1 ATGTCATCGTCTAGGGCAGGGGGAGAGGGAGGGCGAGGAGGAGGAAGAAGAGGGCAAGGTTACATGGAGCACCTGCTTGA GAAGTTGAATCACCTGGATCAGCTGCAGAAAGATCAGGACAGCATCACCGAGAAGATCAATGAAATCCACAAAATACTCC GCTTCTCTCCAGAGATGGTTGATAAACAGGTTGATGCTACGTTGATTCGGCTTCGTGCTTTATATACACGTGCCAAAGAA CTTTGTGAGAGTGAAGTCAGTGCATCGTCTGCTTTGGTTGGACTATTGGATGGTTTGTTGCAATCTGGAACTTCAGCTGC ACAACGAAAAAAGATAGAAGTTGGTGAGCAGAAAAAGAAGAGGATGAAGTCTGATACAGATACTACACGATTCTCCTCTG CATCTATGAGGAGCCAACTTGACCAAGCTACAAACCTGAAAGGAGAACAGGTTGCAGCTAAGGTCAAATCAGACGAAGAA AAAGATGAATGGTTTGTGGTGAAGGTGATACATTTCGATAAGGAAACAAAAGAATATGAGGTACTTGATGAGGAGCCAGG TGACGATGAAGAGAGTGCCCAAAAGAAGTACAAGTTGCCTATGTCAGATATTATTCCATTTCCAAAGAGAGGGGATCCTT CCAGTGCCCCAGATTTTGGGCAGGGTCGACAAGTCTTAGCTGTTTATCCTAGCACAACAGCACTATATAGAGCTACTGTT GCCTCTAATCGTAAGAGGAAATCTGACGATTATCTACTCTTGTTTGATGATGACGAGGAGGATGGAAATCTACCACAAAG AGCTGTGCCGTTCTATAGAGTGGTTCCTCTCCCGGAGGGCCACCGGCAGTGA |