
Microexon ID | Ha_15:98338164-98338177:- |
Species | Helianthus annuus | Coordinates | 15:98338164..98338177 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ha_15:98338164-98338177:- does not have available information here.
Ha_15:98338164-98338177:- does not have available information here.
Microexon DNA seq | AGGAAAACTGACGA |
Microexon Amino Acid seq | RKTDD |
Microexon-tag DNA Seq | CCTGGAACCACTGCTCTGTATAAAGCAACTGTCGTGAATACTCGCAAGAGGAAAACTGACGATTATGTTCTTGAGTTTGATGACGACGAGGAAGACGGATCCTTGCCT |
Microexon-tag Amino Acid seq | PGTTALYKATVVNTRKRKTDDYVLEFDDDEEDGSLP |
Transcript ID | Ha.24340.1 |
Gene ID | Ha.24340 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 4.2e-36 |
Motif start | 130 |
Motif end | 262 |
Protein seq | >Ha.24340.1 MSSPDVAGILDQSKELDRLRKDQEEILLEINKMHKKLQSTPEVVEKPGDNSLSRLKMLYVQAKELSENEVAVSSQLLSQL DALIPSGPLGQQRRRMEGNEQKKKRMKADPDVPRLSPSLRNHLDHLANLKGEQVAARVTQEDDDKDEWFIVKVIHFDRET REFEVLDEEPGDDEPAGQRKYKLPMSHIIPFPKRNDPSTAQDFPPGKHVLAVYPGTTALYKATVVNTRKRKTDDYVLEFD DDEEDGSLPQRHVPFHKVVTLPEGHRQ* |
CDS seq | >Ha.24340.1 ATGTCCTCGCCGGACGTTGCTGGAATCTTGGATCAGTCAAAGGAGCTTGATCGTTTACGGAAAGATCAGGAGGAGATACT TCTTGAAATCAACAAGATGCATAAAAAGCTACAATCAACTCCTGAGGTGGTGGAGAAACCGGGTGATAATTCTCTTTCAA GGCTTAAGATGCTTTACGTTCAAGCAAAAGAACTTTCAGAAAATGAAGTAGCTGTTTCCAGTCAGTTGTTAAGTCAGTTA GATGCTCTAATACCTTCCGGGCCTCTTGGACAACAAAGAAGAAGGATGGAAGGTAATGAACAGAAGAAGAAAAGAATGAA AGCTGATCCAGATGTACCCAGGCTTTCTCCGTCTCTTCGTAATCATCTTGATCATCTTGCAAACTTAAAGGGCGAACAAG TTGCTGCTAGGGTCACACAGGAGGATGATGACAAAGACGAGTGGTTCATCGTCAAAGTAATTCACTTTGATAGGGAAACA CGAGAATTTGAAGTTCTTGATGAGGAACCAGGTGATGATGAACCAGCTGGCCAGAGAAAATACAAGCTGCCAATGTCACA TATTATACCTTTCCCGAAGCGAAATGATCCATCTACCGCTCAAGATTTCCCACCTGGAAAACACGTATTGGCAGTTTATC CTGGAACCACTGCTCTGTATAAAGCAACTGTCGTGAATACTCGCAAGAGGAAAACTGACGATTATGTTCTTGAGTTTGAT GACGACGAGGAAGACGGATCCTTGCCTCAGAGGCACGTGCCCTTCCACAAGGTAGTTACCCTTCCTGAAGGGCATCGCCA ATGA |