Microexon ID Ha_15:98338164-98338177:-
Species Helianthus annuus
Coordinates 15:98338164..98338177
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Ha_15:98338164-98338177:- does not have available information here.
Ha_15:98338164-98338177:- does not have available information here.
Microexon DNA seq AGGAAAACTGACGA
Microexon Amino Acid seq RKTDD
Microexon-tag DNA Seq CCTGGAACCACTGCTCTGTATAAAGCAACTGTCGTGAATACTCGCAAGAGGAAAACTGACGATTATGTTCTTGAGTTTGATGACGACGAGGAAGACGGATCCTTGCCT
Microexon-tag Amino Acid seq PGTTALYKATVVNTRKRKTDDYVLEFDDDEEDGSLP
Transcript ID Ha.24340.1
Gene ID Ha.24340
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 4.2e-36
Motif start 130
Motif end 262
Protein seq >Ha.24340.1
MSSPDVAGILDQSKELDRLRKDQEEILLEINKMHKKLQSTPEVVEKPGDNSLSRLKMLYVQAKELSENEVAVSSQLLSQL
DALIPSGPLGQQRRRMEGNEQKKKRMKADPDVPRLSPSLRNHLDHLANLKGEQVAARVTQEDDDKDEWFIVKVIHFDRET
REFEVLDEEPGDDEPAGQRKYKLPMSHIIPFPKRNDPSTAQDFPPGKHVLAVYPGTTALYKATVVNTRKRKTDDYVLEFD
DDEEDGSLPQRHVPFHKVVTLPEGHRQ*
CDS seq >Ha.24340.1
ATGTCCTCGCCGGACGTTGCTGGAATCTTGGATCAGTCAAAGGAGCTTGATCGTTTACGGAAAGATCAGGAGGAGATACT
TCTTGAAATCAACAAGATGCATAAAAAGCTACAATCAACTCCTGAGGTGGTGGAGAAACCGGGTGATAATTCTCTTTCAA
GGCTTAAGATGCTTTACGTTCAAGCAAAAGAACTTTCAGAAAATGAAGTAGCTGTTTCCAGTCAGTTGTTAAGTCAGTTA
GATGCTCTAATACCTTCCGGGCCTCTTGGACAACAAAGAAGAAGGATGGAAGGTAATGAACAGAAGAAGAAAAGAATGAA
AGCTGATCCAGATGTACCCAGGCTTTCTCCGTCTCTTCGTAATCATCTTGATCATCTTGCAAACTTAAAGGGCGAACAAG
TTGCTGCTAGGGTCACACAGGAGGATGATGACAAAGACGAGTGGTTCATCGTCAAAGTAATTCACTTTGATAGGGAAACA
CGAGAATTTGAAGTTCTTGATGAGGAACCAGGTGATGATGAACCAGCTGGCCAGAGAAAATACAAGCTGCCAATGTCACA
TATTATACCTTTCCCGAAGCGAAATGATCCATCTACCGCTCAAGATTTCCCACCTGGAAAACACGTATTGGCAGTTTATC
CTGGAACCACTGCTCTGTATAAAGCAACTGTCGTGAATACTCGCAAGAGGAAAACTGACGATTATGTTCTTGAGTTTGAT
GACGACGAGGAAGACGGATCCTTGCCTCAGAGGCACGTGCCCTTCCACAAGGTAGTTACCCTTCCTGAAGGGCATCGCCA
ATGA