
Microexon ID | Gm_16:6870731-6870744:- |
Species | Glycine max | Coordinates | 16:6870731..6870744 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGGAAGACCGAGGA |
Microexon Amino Acid seq | RKTED |
Microexon-tag DNA Seq | GGAACTACTGCACTTTATAAAGCAACAGTTGTTCAAGGCCCTCGCAGAAGGAAGACCGAGGATTATGTGTTGGAATTTGATGATGATGAGGAAGATGGATCTTTACCT |
Microexon-tag Amino Acid Seq | GTTALYKATVVQGPRRRKTEDYVLEFDDDEEDGSLP |
Microexon-tag spanning region | 6868090-6870968 |
Microexon-tag prediction score | 0.9584 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | RCW18957x |
Reference Transcript ID | RCW18957 |
Gene ID | GLYMA_16G069000 |
Gene Name | NA |
Transcript ID | RCW18957 |
Protein ID | RCW18957 |
Gene ID | GLYMA_16G069000 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 4.4e-35 |
Motif start | 129 |
Motif end | 263 |
Protein seq | >RCW18957 MSSPDIVSILENSKEFDRVRKEQEDILSEINKLHKKLQATPEVVEKPGDNSLARLKFLYTQAKDLSESEASISNLLINQI DALLPTGPQGQTRRRIGNEQKRKRVKTESDISRLTPNMRSQLEACASLKGEQVAARVTPRNADKDEWFVVKVIHFDKESK EFEVLDEEPGDDEESSGQRQYKLPMANIIPFPKSNDPSSAPDFPPGKHVLAVYPGTTALYKATVVQGPRRRKTEDYVLEF DDDEEDGSLPQRTVPFRKVVPLPEGHRQ* |
CDS seq | >RCW18957 ATGTCTTCGCCGGACATTGTCTCGATATTGGAGAACTCGAAGGAGTTCGATCGGGTGAGGAAAGAACAAGAGGATATTCT GTCGGAGATCAACAAACTTCACAAGAAGCTTCAAGCAACTCCTGAAGTAGTTGAGAAGCCTGGGGATAACTCATTGGCTA GGCTGAAATTTTTGTACACTCAAGCAAAAGATCTTTCAGAAAGTGAAGCAAGTATTTCCAACTTACTGATAAACCAAATT GATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGGTAATGAGCAGAAAAGGAAACGAGTGAAGAC TGAGTCAGACATTTCAAGGCTAACTCCTAATATGCGAAGTCAACTTGAGGCTTGTGCCAGTCTTAAAGGCGAACAGGTAG CGGCTAGGGTCACACCACGAAATGCTGATAAGGACGAGTGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAG GAATTTGAAGTACTGGATGAGGAACCAGGCGATGATGAAGAAAGCAGTGGCCAAAGACAATACAAGCTTCCCATGGCAAA TATCATTCCTTTCCCCAAGAGTAATGATCCTTCTAGCGCTCCTGATTTCCCTCCTGGAAAACATGTTTTGGCGGTCTATC CAGGAACTACTGCACTTTATAAAGCAACAGTTGTTCAAGGCCCTCGCAGAAGGAAGACCGAGGATTATGTGTTGGAATTT GATGATGATGAGGAAGATGGATCTTTACCTCAAAGGACAGTGCCATTCCGCAAAGTGGTTCCTCTTCCAGAAGGACATCG CCAATGA |
Microexon DNA seq | AGGAAGACCGAGGA |
Microexon Amino Acid seq | RKTED |
Microexon-tag DNA Seq | GGAACTACTGCACTTTATAAAGCAACAGTTGTTCAAGGCCCTCGCAGAAGGAAGACCGAGGATTATGTGTTGGAATTTGATGATGATGAGGAAGATGGATCTTTACCT |
Microexon-tag Amino Acid seq | GTTALYKATVVQGPRRRKTEDYVLEFDDDEEDGSLP |
Transcript ID | RCW18957 |
Gene ID | Gm.19944 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 4.5e-35 |
Motif start | 129 |
Motif end | 263 |
Protein seq | >RCW18957 MSSPDIVSILENSKEFDRVRKEQEDILSEINKLHKKLQATPEVVEKPGDNSLARLKFLYTQAKDLSESEASISNLLINQI DALLPTGPQGQTRRRIGNEQKRKRVKTESDISRLTPNMRSQLEACASLKGEQVAARVTPRNADKDEWFVVKVIHFDKESK EFEVLDEEPGDDEESSGQRQYKLPMANIIPFPKSNDPSSAPDFPPGKHVLAVYPGTTALYKATVVQGPRRRKTEDYVLEF DDDEEDGSLPQRTVPFRKVVPLPEGHRQ* |
CDS seq | >RCW18957 ATGTCTTCGCCGGACATTGTCTCGATATTGGAGAACTCGAAGGAGTTCGATCGGGTGAGGAAAGAACAAGAGGATATTCT GTCGGAGATCAACAAACTTCACAAGAAGCTTCAAGCAACTCCTGAAGTAGTTGAGAAGCCTGGGGATAACTCATTGGCTA GGCTGAAATTTTTGTACACTCAAGCAAAAGATCTTTCAGAAAGTGAAGCAAGTATTTCCAACTTACTGATAAACCAAATT GATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGGTAATGAGCAGAAAAGGAAACGAGTGAAGAC TGAGTCAGACATTTCAAGGCTAACTCCTAATATGCGAAGTCAACTTGAGGCTTGTGCCAGTCTTAAAGGCGAACAGGTAG CGGCTAGGGTCACACCACGAAATGCTGATAAGGACGAGTGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAG GAATTTGAAGTACTGGATGAGGAACCAGGCGATGATGAAGAAAGCAGTGGCCAAAGACAATACAAGCTTCCCATGGCAAA TATCATTCCTTTCCCCAAGAGTAATGATCCTTCTAGCGCTCCTGATTTCCCTCCTGGAAAACATGTTTTGGCGGTCTATC CAGGAACTACTGCACTTTATAAAGCAACAGTTGTTCAAGGCCCTCGCAGAAGGAAGACCGAGGATTATGTGTTGGAATTT GATGATGATGAGGAAGATGGATCTTTACCTCAAAGGACAGTGCCATTCCGCAAAGTGGTTCCTCTTCCAGAAGGACATCG CCAATGA |