Microexon ID At_5:16242896-16242909:+
Species Arabidopsis thaliana
Coordinates 5:16242896..16242909
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGGAAGTCTGACGA
Microexon Amino Acid seq RKSDE
Microexon-tag DNA Seq GGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCT
Microexon-tag Amino Acid Seq GTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALP
Microexon-tag spanning region16242738-16243043
Microexon-tag prediction score0.9711
Overlapped with the annotated transcript (%) 100
New Transcript ID AT5G40550.1x
Reference Transcript ID AT5G40550.1
Gene ID AT5G40550
Gene Name NA
Transcript ID AT5G40550.1
Protein ID AT5G40550.1
Gene ID AT5G40550
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.7e-32
Motif start 134
Motif end 268
Protein seq >AT5G40550.1
MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKELSENEVTVSNILLTQL
DLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLSPSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHF
DRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDE
YLLEFDDDEEDGALPQRTVPFHKVVALPEGHRQ*
CDS seq >AT5G40550.1
ATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTT
GGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAA
AGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTG
GATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGTGGTGGCAGAAGGTAATGATCAGAAGAG
GAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTA
AGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTC
GATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAA
GTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACG
TCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAG
TATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTT
ACCAGAAGGTCATCGCCAGTGA
Microexon DNA seq AGGAAGTCTGACGA
Microexon Amino Acid seq RKSDE
Microexon-tag DNA Seq GGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCT
Microexon-tag Amino Acid seq GTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALP
Transcript ID AT5G40550.2
Gene ID At.25045
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.6e-32
Motif start 131
Motif end 265
Protein seq >AT5G40550.2
MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKELSENEVTVSNILLTQL
DLLLPYGPTGQQRRKLGEGNDQKRKRMKVDSDVIRLSPSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRE
TKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLL
EFDDDEEDGALPQRTVPFHKVVALPEGHRQ*
CDS seq >AT5G40550.2
ATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTT
GGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAA
AGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTG
GATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGAT
GAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAAC
AGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAA
ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAAT
GTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTG
TATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTT
GAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGG
TCATCGCCAGTGA