
Microexon ID | At_5:16242896-16242909:+ |
Species | Arabidopsis thaliana | Coordinates | 5:16242896..16242909 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGGAAGTCTGACGA |
Microexon Amino Acid seq | RKSDE |
Microexon-tag DNA Seq | GGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCT |
Microexon-tag Amino Acid Seq | GTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALP |
Microexon-tag spanning region | 16242738-16243043 |
Microexon-tag prediction score | 0.9711 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G40550.1x |
Reference Transcript ID | AT5G40550.1 |
Gene ID | AT5G40550 |
Gene Name | NA |
Transcript ID | AT5G40550.1 |
Protein ID | AT5G40550.1 |
Gene ID | AT5G40550 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.7e-32 |
Motif start | 134 |
Motif end | 268 |
Protein seq | >AT5G40550.1 MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKELSENEVTVSNILLTQL DLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLSPSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHF DRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDE YLLEFDDDEEDGALPQRTVPFHKVVALPEGHRQ* |
CDS seq | >AT5G40550.1 ATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTT GGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAA AGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTG GATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGTGGTGGCAGAAGGTAATGATCAGAAGAG GAAGAGGATGAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTA AGGGTGAACAGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTC GATAGAGAAACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAA GTTGCCAATGTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACG TCTTAGCTGTATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAG TATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTT ACCAGAAGGTCATCGCCAGTGA |
Microexon DNA seq | AGGAAGTCTGACGA |
Microexon Amino Acid seq | RKSDE |
Microexon-tag DNA Seq | GGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTTGAATTCGACGATGATGAGGAAGATGGAGCATTGCCT |
Microexon-tag Amino Acid seq | GTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALP |
Transcript ID | AT5G40550.2 |
Gene ID | At.25045 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.6e-32 |
Motif start | 131 |
Motif end | 265 |
Protein seq | >AT5G40550.2 MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKELSENEVTVSNILLTQL DLLLPYGPTGQQRRKLGEGNDQKRKRMKVDSDVIRLSPSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRE TKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLL EFDDDEEDGALPQRTVPFHKVVALPEGHRQ* |
CDS seq | >AT5G40550.2 ATGTCGTCACCAGACATTGTCGGAATTTTGGAAAACACGAAGGAACTTGATCGGTTAAGGAAAGACCAAGAAGAAGTTTT GGTTGAGATCAATAAGATGCATAAAAAGCTTCAAGCTTCTCCTGAGATAGTTGAGAAGCCTGGTGATATTTCATTAGCAA AGCTTAAGAATTTGTACATTCAAGCGAAAGAGCTCTCAGAAAATGAAGTAACCGTATCGAACATTTTGCTTACTCAGTTG GATTTGCTGCTTCCATATGGACCAACAGGGCAGCAAAGAAGAAAGTTAGGCGAAGGTAATGATCAGAAGAGGAAGAGGAT GAAAGTTGATTCAGATGTAATAAGACTTTCTCCTTCCATGAGAAATCAAATCGAAGCATATGCAAGTCTTAAGGGTGAAC AGGTTGCTGCAAGAGTTACTGCAGAGAGTGCTGATAAGGATGAATGGTTTGTGGTTAAAGTTATTCACTTCGATAGAGAA ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAAGCGGTCAGAGGACCTATAAGTTGCCAAT GTTATGCATTTTACCATTCCCAAAGCGAAACGATCCTTCGAACACCCAAGAGTTTCCACCGGGTAAACACGTCTTAGCTG TATATCCCGGGACAACAGCACTCTACAAAGCAACTGTAGTAAGTACCCCACGAAAGAGGAAGTCTGACGAGTATTTGCTT GAATTCGACGATGATGAGGAAGATGGAGCATTGCCTCAAAGAACAGTACCTTTCCACAAAGTGGTAGCTTTACCAGAAGG TCATCGCCAGTGA |