Microexon ID At_3:10159738-10159751:-
Species Arabidopsis thaliana
Coordinates 3:10159738..10159751
Microexon Cluster ID MEP34
Size 14
Phase 0
Pfam Domain Motif DUF1325
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGGAAATCTGACGA
Microexon Amino Acid seq RKSDE
Microexon-tag DNA Seq GGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTAGAATTTGATGATGATGAAGAAGACGGAGCATTACCT
Microexon-tag Amino Acid Seq GTTALYKATVISTPRKRKSDEYLLEFDDDEEDGALP
Microexon-tag spanning region10159594-10159908
Microexon-tag prediction score0.9676
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G27460.1x
Reference Transcript ID AT3G27460.1
Gene ID AT3G27460
Gene Name NA
Transcript ID AT3G27460.1
Protein ID AT3G27460.1
Gene ID AT3G27460
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.4e-32
Motif start 131
Motif end 265
Protein seq >AT3G27460.1
MSSSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQAKELSESEVTVSNILLTQ
LDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRNQIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRE
TKEVEVLDEEPGDDEEGGGQRTYKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLL
EFDDDEEDGALPQRTVPFHKVVALPEGHRQ*
CDS seq >AT3G27460.1
ATGTCGTCGTCGCCGGACATTGCCGGAATCTTAGATAATACGAAGGAGCTTGATCGGTTAAGAAAAGAACAAGAGGAAGT
TCTTGTGGAGATTAATAAGATGCATAAGAAGCTTCAAGCTACGCCGGAGATAGTTGAGAAGCCTGGTGATATTTCATTGT
CAAAGCTTAAAAATTTGTACATTCAAGCAAAAGAGCTTTCAGAAAGTGAAGTAACCGTTTCAAATATTCTGCTTACTCAG
TTGGATTCTCTGCTTCCATCTGGACCAACTGGGCAACAACGCAGAAAATTAGAAGGCAACGAACAGAAGAGAAAGAGAAT
GAAAGTAGATACAGATGTAACAAGAGTTTCTCCTTCCATGAGAAATCAAATCGAGGCATATGCTAGTCTAAAGGGTGAAC
AGGTTGCTGCAAGAGTCACAGCTGAAGATGCCGAGAAGGATGAATGGTTTGTGGTGAAAGTTATTCACTTCGACAGAGAA
ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAGGTGGCCAGAGGACGTATAAACTATCAAT
GTCATGTATTTTACCGTTTCCAAAACGGAATGATCCTTCAAGCACACAAGAGTTTATACCAGGGAAACACGTCTTAGCTG
TATATCCAGGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTA
GAATTTGATGATGATGAAGAAGACGGAGCATTACCTCAAAGAACAGTGCCATTCCACAAAGTGGTAGCTTTACCAGAAGG
CCATCGCCAGTAA
Microexon DNA seq AGGAAATCTGACGA
Microexon Amino Acid seq RKSDE
Microexon-tag DNA Seq GGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTAGAATTTGATGATGATGAAGAAGACGGAGCATTACCT
Microexon-tag Amino Acid seq GTTALYKATVISTPRKRKSDEYLLEFDDDEEDGALP
Transcript ID AT3G27460.1
Gene ID At.14884
Gene Name NA
Pfam domain motif DUF1325
Motif E-value 2.4e-32
Motif start 131
Motif end 265
Protein seq >AT3G27460.1
MSSSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQAKELSESEVTVSNILLTQ
LDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRNQIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRE
TKEVEVLDEEPGDDEEGGGQRTYKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLL
EFDDDEEDGALPQRTVPFHKVVALPEGHRQ*
CDS seq >AT3G27460.1
ATGTCGTCGTCGCCGGACATTGCCGGAATCTTAGATAATACGAAGGAGCTTGATCGGTTAAGAAAAGAACAAGAGGAAGT
TCTTGTGGAGATTAATAAGATGCATAAGAAGCTTCAAGCTACGCCGGAGATAGTTGAGAAGCCTGGTGATATTTCATTGT
CAAAGCTTAAAAATTTGTACATTCAAGCAAAAGAGCTTTCAGAAAGTGAAGTAACCGTTTCAAATATTCTGCTTACTCAG
TTGGATTCTCTGCTTCCATCTGGACCAACTGGGCAACAACGCAGAAAATTAGAAGGCAACGAACAGAAGAGAAAGAGAAT
GAAAGTAGATACAGATGTAACAAGAGTTTCTCCTTCCATGAGAAATCAAATCGAGGCATATGCTAGTCTAAAGGGTGAAC
AGGTTGCTGCAAGAGTCACAGCTGAAGATGCCGAGAAGGATGAATGGTTTGTGGTGAAAGTTATTCACTTCGACAGAGAA
ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAGGTGGCCAGAGGACGTATAAACTATCAAT
GTCATGTATTTTACCGTTTCCAAAACGGAATGATCCTTCAAGCACACAAGAGTTTATACCAGGGAAACACGTCTTAGCTG
TATATCCAGGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTA
GAATTTGATGATGATGAAGAAGACGGAGCATTACCTCAAAGAACAGTGCCATTCCACAAAGTGGTAGCTTTACCAGAAGG
CCATCGCCAGTAA