
Microexon ID | At_3:10159738-10159751:- |
Species | Arabidopsis thaliana | Coordinates | 3:10159738..10159751 |
Microexon Cluster ID | MEP34 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | DUF1325 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GGAACMACWGCACTTTAYAARGCAACTGTWGTTARTACYCMTCGMAAGAGGAARWCTGAYGAKTATTTGYTGGARTTYGATGAYGAYGARGAAGAYGGAKCTTTGCCK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGGAAATCTGACGA |
Microexon Amino Acid seq | RKSDE |
Microexon-tag DNA Seq | GGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTAGAATTTGATGATGATGAAGAAGACGGAGCATTACCT |
Microexon-tag Amino Acid Seq | GTTALYKATVISTPRKRKSDEYLLEFDDDEEDGALP |
Microexon-tag spanning region | 10159594-10159908 |
Microexon-tag prediction score | 0.9676 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G27460.1x |
Reference Transcript ID | AT3G27460.1 |
Gene ID | AT3G27460 |
Gene Name | NA |
Transcript ID | AT3G27460.1 |
Protein ID | AT3G27460.1 |
Gene ID | AT3G27460 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.4e-32 |
Motif start | 131 |
Motif end | 265 |
Protein seq | >AT3G27460.1 MSSSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQAKELSESEVTVSNILLTQ LDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRNQIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRE TKEVEVLDEEPGDDEEGGGQRTYKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLL EFDDDEEDGALPQRTVPFHKVVALPEGHRQ* |
CDS seq | >AT3G27460.1 ATGTCGTCGTCGCCGGACATTGCCGGAATCTTAGATAATACGAAGGAGCTTGATCGGTTAAGAAAAGAACAAGAGGAAGT TCTTGTGGAGATTAATAAGATGCATAAGAAGCTTCAAGCTACGCCGGAGATAGTTGAGAAGCCTGGTGATATTTCATTGT CAAAGCTTAAAAATTTGTACATTCAAGCAAAAGAGCTTTCAGAAAGTGAAGTAACCGTTTCAAATATTCTGCTTACTCAG TTGGATTCTCTGCTTCCATCTGGACCAACTGGGCAACAACGCAGAAAATTAGAAGGCAACGAACAGAAGAGAAAGAGAAT GAAAGTAGATACAGATGTAACAAGAGTTTCTCCTTCCATGAGAAATCAAATCGAGGCATATGCTAGTCTAAAGGGTGAAC AGGTTGCTGCAAGAGTCACAGCTGAAGATGCCGAGAAGGATGAATGGTTTGTGGTGAAAGTTATTCACTTCGACAGAGAA ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAGGTGGCCAGAGGACGTATAAACTATCAAT GTCATGTATTTTACCGTTTCCAAAACGGAATGATCCTTCAAGCACACAAGAGTTTATACCAGGGAAACACGTCTTAGCTG TATATCCAGGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTA GAATTTGATGATGATGAAGAAGACGGAGCATTACCTCAAAGAACAGTGCCATTCCACAAAGTGGTAGCTTTACCAGAAGG CCATCGCCAGTAA |
Microexon DNA seq | AGGAAATCTGACGA |
Microexon Amino Acid seq | RKSDE |
Microexon-tag DNA Seq | GGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTAGAATTTGATGATGATGAAGAAGACGGAGCATTACCT |
Microexon-tag Amino Acid seq | GTTALYKATVISTPRKRKSDEYLLEFDDDEEDGALP |
Transcript ID | AT3G27460.1 |
Gene ID | At.14884 |
Gene Name | NA |
Pfam domain motif | DUF1325 |
Motif E-value | 2.4e-32 |
Motif start | 131 |
Motif end | 265 |
Protein seq | >AT3G27460.1 MSSSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQAKELSESEVTVSNILLTQ LDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRNQIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRE TKEVEVLDEEPGDDEEGGGQRTYKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLL EFDDDEEDGALPQRTVPFHKVVALPEGHRQ* |
CDS seq | >AT3G27460.1 ATGTCGTCGTCGCCGGACATTGCCGGAATCTTAGATAATACGAAGGAGCTTGATCGGTTAAGAAAAGAACAAGAGGAAGT TCTTGTGGAGATTAATAAGATGCATAAGAAGCTTCAAGCTACGCCGGAGATAGTTGAGAAGCCTGGTGATATTTCATTGT CAAAGCTTAAAAATTTGTACATTCAAGCAAAAGAGCTTTCAGAAAGTGAAGTAACCGTTTCAAATATTCTGCTTACTCAG TTGGATTCTCTGCTTCCATCTGGACCAACTGGGCAACAACGCAGAAAATTAGAAGGCAACGAACAGAAGAGAAAGAGAAT GAAAGTAGATACAGATGTAACAAGAGTTTCTCCTTCCATGAGAAATCAAATCGAGGCATATGCTAGTCTAAAGGGTGAAC AGGTTGCTGCAAGAGTCACAGCTGAAGATGCCGAGAAGGATGAATGGTTTGTGGTGAAAGTTATTCACTTCGACAGAGAA ACAAAAGAAGTTGAAGTACTTGATGAAGAACCAGGAGATGATGAAGAAGGAGGTGGCCAGAGGACGTATAAACTATCAAT GTCATGTATTTTACCGTTTCCAAAACGGAATGATCCTTCAAGCACACAAGAGTTTATACCAGGGAAACACGTCTTAGCTG TATATCCAGGAACCACAGCCCTCTACAAGGCAACTGTTATAAGTACCCCACGAAAGAGGAAATCTGACGAGTACTTGCTA GAATTTGATGATGATGAAGAAGACGGAGCATTACCTCAAAGAACAGTGCCATTCCACAAAGTGGTAGCTTTACCAGAAGG CCATCGCCAGTAA |