Microexon ID Zm_2:45884860-45884872:-
Species Zea mays
Coordinates 2:45884860..45884872
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATGATTATGAG
Microexon Amino Acid seq LYDYE
Microexon-tag DNA Seq GACTTCTTGTCAGTTTCAGAATTTTTGGTTGAGATATCTGATGACCTGTATGATTATGAGGATGACGTTATGAACAATACGTTCAATATCCTTCGCATGTTTGCTGCA
Microexon-tag Amino Acid Seq DFLSVSEFLVEISDDLYDYEDDVMNNTFNILRMFAA
Microexon-tag spanning region45884717-45885483
Microexon-tag prediction score0.9517
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d003491_T004x
Reference Transcript ID Zm00001d003491_T004
Gene ID Zm00001d003491
Gene Name NA
Transcript ID Zm00001d003491_T002
Protein ID Zm00001d003491_P002
Gene ID Zm00001d003491
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d003491_P002
MEALLELEKMQRVLSLMSSRGLSHTDSSCGGAAADRFLAQFLLFMLDASNEDCLHVVPDDNTSKVRPALLRTELKSGIQY
WSLERKLCQALLRNEKVRRDLCLLSMNCIWTSCQFQNFWLRYLMTCEFALNLIPMHHSITKWYDYEDDVMNNTFNILRMF
AAIYGPLEAPNMLAKCIGEAEEKYESFSKKLDPSLSGSYWRRCEEATKEGGKTSGHAYGTWNIPRVISNEDAFRRERRSK
HDACAVIT*
CDS seq >Zm00001d003491_T002
ATGGAGGCGCTGCTGGAGCTCGAGAAGATGCAGAGGGTGCTGTCCCTCATGAGTTCACGCGGCCTCTCCCACACCGACTC
CAGCTGCGGCGGCGCTGCCGCTGACCGCTTCCTCGCCCAATTCCTCCTCTTCATGTTAGATGCTTCAAATGAAGACTGTT
TACATGTAGTCCCAGATGACAACACTTCAAAAGTAAGACCTGCATTATTGCGAACTGAACTCAAATCAGGCATTCAGTAT
TGGTCTCTAGAGAGGAAGCTCTGCCAAGCATTACTAAGAAATGAGAAGGTAAGGAGAGACCTTTGTTTGCTGTCAATGAA
TTGCATATGGACTTCTTGTCAGTTTCAGAATTTTTGGTTGAGATATCTGATGACCTGTGAGTTTGCTCTGAATCTTATTC
CCATGCATCACAGCATAACAAAATGGTATGATTATGAGGATGACGTTATGAACAATACGTTCAATATCCTTCGCATGTTT
GCTGCAATATATGGACCATTAGAGGCACCGAATATGCTGGCCAAGTGCATAGGCGAGGCTGAAGAGAAATACGAGAGCTT
CTCCAAGAAACTGGATCCTAGTCTCTCAGGTAGTTACTGGAGAAGATGTGAGGAAGCGACGAAGGAAGGCGGAAAAACAT
CAGGCCATGCATATGGAACATGGAATATCCCTCGTGTGATAAGCAACGAAGATGCTTTCCGACGTGAAAGACGGAGCAAA
CACGATGCTTGTGCTGTGATCACTTGA
Microexon DNA seq GTATGATTATGAG
Microexon Amino Acid seq LYDYE
Microexon-tag DNA Seq GACTTCTTGTCAGTTTCAGAATTTTTGGTTGAGATATCTGATGACCTGTATGATTATGAGGATGACGTTATGAACAATACGTTCAATATCCTTCGCATGTTTGCTGCA
Microexon-tag Amino Acid seq DFLSVSEFLVEISDDLYDYEDDVMNNTFNILRMFAA
Transcript ID Zm.9885.1
Gene ID Zm.9885
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm.9885.1
MRRKASGFWNLEPNAAFPNWGHTLTSASFLFYFRSPPFSVCYFASLEQNLKQLEAKPRYCEKRKRGGRGGAAMEALLELE
KMQRVLSLMSSRGLSHTDSSCGGAAADRFLAQFLLFMVQPFDSLTLENKFLLISELLRKATPNTLEEVQHLTHLEANKDI
CSGGSLQPIKKFKMHAEKSTVQAMPMVGFDAMARAKSTLEDFCRSYFMFHGLDVNKPQAIFKYLPVLSFTESYIYQLDAS
NEDCLHVVPDDNTSKVLGKKEESLNETSLSQMIEPLEGLLQCQGLMTDRLRTELKSGIQYWSLERKLCQALLRNEKISIE
DVMMAIHLKSFDYRVLNLLMFQLTGQHVNELHMDFLSVSEFLVEISDDLYDYEDDVMNNTFNILRMFAAIYGPLEAPNML
AKCIGEAEEKYESFSKKLDPSLSGSYWRRCEEATKEGGKTSGHAYGTWNIPRVISNEDAFRRERRSKHDACAVIT*
CDS seq >Zm.9885.1
ATGAGGAGAAAGGCCTCAGGATTTTGGAATTTGGAACCCAACGCTGCATTTCCCAACTGGGGGCACACATTAACCTCAGC
CTCATTTCTCTTTTATTTCCGCTCTCCTCCATTCTCTGTTTGCTACTTTGCAAGTCTCGAACAAAACCTGAAGCAACTCG
AAGCGAAGCCGCGATACTGCGAGAAGCGGAAGCGGGGAGGGCGAGGAGGAGCAGCAATGGAGGCGCTGCTGGAGCTCGAG
AAGATGCAGAGGGTGCTGTCCCTCATGAGTTCACGCGGCCTCTCCCACACCGACTCCAGCTGCGGCGGCGCTGCCGCTGA
CCGCTTCCTCGCCCAATTCCTCCTCTTCATGGTGCAACCGTTTGATTCTCTTACCCTGGAGAATAAGTTCCTTTTGATCT
CTGAGCTATTAAGAAAGGCTACTCCTAATACTTTGGAAGAAGTGCAGCATCTCACCCATCTGGAAGCTAATAAAGATATA
TGTTCTGGAGGTTCACTCCAGCCAATTAAGAAGTTTAAGATGCATGCCGAGAAATCAACCGTTCAAGCTATGCCGATGGT
TGGTTTTGATGCGATGGCAAGAGCTAAGTCTACGCTTGAAGATTTTTGTAGGTCGTACTTTATGTTTCATGGTTTGGATG
TTAACAAGCCACAAGCCATTTTCAAGTATCTACCTGTTCTTTCTTTCACAGAGAGTTACATATATCAGTTAGATGCTTCA
AATGAAGACTGTTTACATGTAGTCCCAGATGACAACACTTCAAAAGTGTTGGGAAAGAAAGAAGAATCTCTCAATGAGAC
ATCCTTGTCTCAAATGATTGAACCCCTTGAAGGGCTTCTTCAGTGCCAAGGATTAATGACAGACCGATTGCGAACTGAAC
TCAAATCAGGCATTCAGTATTGGTCTCTAGAGAGGAAGCTCTGCCAAGCATTACTAAGAAATGAGAAGATCTCGATTGAA
GATGTTATGATGGCAATCCATCTGAAATCATTTGACTATCGAGTTCTTAACCTGTTGATGTTTCAACTTACTGGTCAGCA
TGTCAATGAATTGCATATGGACTTCTTGTCAGTTTCAGAATTTTTGGTTGAGATATCTGATGACCTGTATGATTATGAGG
ATGACGTTATGAACAATACGTTCAATATCCTTCGCATGTTTGCTGCAATATATGGACCATTAGAGGCACCGAATATGCTG
GCCAAGTGCATAGGCGAGGCTGAAGAGAAATACGAGAGCTTCTCCAAGAAACTGGATCCTAGTCTCTCAGGTAGTTACTG
GAGAAGATGTGAGGAAGCGACGAAGGAAGGCGGAAAAACATCAGGCCATGCATATGGAACATGGAATATCCCTCGTGTGA
TAAGCAACGAAGATGCTTTCCGACGTGAAAGACGGAGCAAACACGATGCTTGTGCTGTGATCACTTGA