Microexon ID Vv_Un:27160870-27160882:-
Species Vistis vinifera
Coordinates Un:27160870..27160882
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTGATTATGAG
Microexon Amino Acid seq LFDYE
Microexon-tag DNA Seq GAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAGA
Microexon-tag Amino Acid Seq EFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVR
Microexon-tag spanning region27160733-27161286
Microexon-tag prediction score0.9697
Overlapped with the annotated transcript (%) 27.62
New Transcript ID VIT_00s0391g00050.t01x
Reference Transcript ID VIT_00s0391g00050.t01
Gene ID VIT_00s0391g00050
Gene Name NA
Transcript ID VIT_00s0391g00050.t01
Protein ID VIT_00s0391g00050.t01
Gene ID VIT_00s0391g00050
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >VIT_00s0391g00050.t01
MMTNPTMFDYEDDVLENNFNILRMFVRIYGASTAQTMLAKCISEAEEKYDHLLKTLDPQLSSKYRRRCEEATKEGGKISG
HALGTWSMPPVIVDEDLYRSNVLSSRSTMVPPDRHSLE*
CDS seq >VIT_00s0391g00050.t01
ATGATGACTAATCCTACAATGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAG
AATATATGGAGCTTCAACAGCACAGACCATGCTGGCAAAATGCATTAGTGAGGCTGAAGAGAAGTACGATCATTTACTGA
AAACTTTGGATCCCCAGCTGTCATCAAAGTACCGGAGAAGATGTGAAGAAGCCACTAAAGAAGGCGGGAAGATATCTGGA
CATGCTCTTGGGACATGGAGTATGCCACCTGTGATTGTGGACGAGGACTTGTATAGATCCAATGTGTTAAGTTCTAGATC
AACAATGGTACCTCCTGATAGACATAGTTTGGAATGA
Microexon DNA seq GTTTGATTATGAG
Microexon Amino Acid seq LFDYE
Microexon-tag DNA Seq GAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAGA
Microexon-tag Amino Acid seq EFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVR
Transcript ID Vv.35243.2
Gene ID Vv.35243
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.35243.2
MEFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVRIYGASTAQTMLAKCISEAEEKYDHLLKTLDPQLSSKYRRRCEE
ATKEGGKISGHALGTWSMPPVIVDEDLYRSNVLSSRSTMVPPDRHSLE*
CDS seq >Vv.35243.2
ATGGAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAA
TAATTTTAATATTTTGCGCATGTTTGTCAGAATATATGGAGCTTCAACAGCACAGACCATGCTGGCAAAATGCATTAGTG
AGGCTGAAGAGAAGTACGATCATTTACTGAAAACTTTGGATCCCCAGCTGTCATCAAAGTACCGGAGAAGATGTGAAGAA
GCCACTAAAGAAGGCGGGAAGATATCTGGACATGCTCTTGGGACATGGAGTATGCCACCTGTGATTGTGGACGAGGACTT
GTATAGATCCAATGTGTTAAGTTCTAGATCAACAATGGTACCTCCTGATAGACATAGTTTGGAATGA