
Microexon ID | Vv_Un:27160870-27160882:- |
Species | Vistis vinifera | Coordinates | Un:27160870..27160882 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | GAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAGA |
Microexon-tag Amino Acid Seq | EFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVR |
Microexon-tag spanning region | 27160733-27161286 |
Microexon-tag prediction score | 0.9697 |
Overlapped with the annotated transcript (%) | 27.62 |
New Transcript ID | VIT_00s0391g00050.t01x |
Reference Transcript ID | VIT_00s0391g00050.t01 |
Gene ID | VIT_00s0391g00050 |
Gene Name | NA |
Transcript ID | VIT_00s0391g00050.t01 |
Protein ID | VIT_00s0391g00050.t01 |
Gene ID | VIT_00s0391g00050 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_00s0391g00050.t01 MMTNPTMFDYEDDVLENNFNILRMFVRIYGASTAQTMLAKCISEAEEKYDHLLKTLDPQLSSKYRRRCEEATKEGGKISG HALGTWSMPPVIVDEDLYRSNVLSSRSTMVPPDRHSLE* |
CDS seq | >VIT_00s0391g00050.t01 ATGATGACTAATCCTACAATGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAG AATATATGGAGCTTCAACAGCACAGACCATGCTGGCAAAATGCATTAGTGAGGCTGAAGAGAAGTACGATCATTTACTGA AAACTTTGGATCCCCAGCTGTCATCAAAGTACCGGAGAAGATGTGAAGAAGCCACTAAAGAAGGCGGGAAGATATCTGGA CATGCTCTTGGGACATGGAGTATGCCACCTGTGATTGTGGACGAGGACTTGTATAGATCCAATGTGTTAAGTTCTAGATC AACAATGGTACCTCCTGATAGACATAGTTTGGAATGA |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | GAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAATAATTTTAATATTTTGCGCATGTTTGTCAGA |
Microexon-tag Amino Acid seq | EFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVR |
Transcript ID | Vv.35243.2 |
Gene ID | Vv.35243 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.35243.2 MEFLSISEFLVEVSDDLFDYEDDVLENNFNILRMFVRIYGASTAQTMLAKCISEAEEKYDHLLKTLDPQLSSKYRRRCEE ATKEGGKISGHALGTWSMPPVIVDEDLYRSNVLSSRSTMVPPDRHSLE* |
CDS seq | >Vv.35243.2 ATGGAATTTCTATCAATCTCGGAATTCCTTGTAGAGGTGTCTGACGATTTGTTTGATTATGAGGATGATGTGCTAGAGAA TAATTTTAATATTTTGCGCATGTTTGTCAGAATATATGGAGCTTCAACAGCACAGACCATGCTGGCAAAATGCATTAGTG AGGCTGAAGAGAAGTACGATCATTTACTGAAAACTTTGGATCCCCAGCTGTCATCAAAGTACCGGAGAAGATGTGAAGAA GCCACTAAAGAAGGCGGGAAGATATCTGGACATGCTCTTGGGACATGGAGTATGCCACCTGTGATTGTGGACGAGGACTT GTATAGATCCAATGTGTTAAGTTCTAGATCAACAATGGTACCTCCTGATAGACATAGTTTGGAATGA |