
Microexon ID | Sm_GL377733:27691-27703:- |
Species | Selaginella moellendorffii | Coordinates | GL377733:27691..27703 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTGATTACGAG |
Microexon Amino Acid seq | LSDYE |
Microexon-tag DNA Seq | GGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA |
Microexon-tag Amino Acid Seq | GFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK |
Microexon-tag spanning region | 27594-27808 |
Microexon-tag prediction score | 0.8751 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Sm_GL377733:27691-27703:- does not have available information here.
Microexon DNA seq | GTCTGATTACGAG |
Microexon Amino Acid seq | LSDYE |
Microexon-tag DNA Seq | GGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA |
Microexon-tag Amino Acid seq | GFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK |
Transcript ID | Sm.31703.3 |
Gene ID | Sm.31703 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Sm.31703.3 MQDIHDPVNDVDPFYGLKLELAARNLWTDRMANELLKGCHYLKLEQSICRSGPEDQISILDARRALEFKSADYKLLNLLL YKMRGEEVNEFHFGFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYKVYGPKLGSQMLVRWQLALILTRIVLQAEYIS AVKLRFEEKLNKLEPELREKFPIRYQEELSRGKSIAEIWEVPPFIDETPYSALVSSK* |
CDS seq | >Sm.31703.3 ATGCAGGATATCCATGACCCAGTCAATGACGTGGATCCCTTTTATGGACTTAAACTGGAACTCGCAGCTCGAAATCTCTG GACGGATAGGATGGCAAATGAACTTTTGAAAGGATGCCATTACTTGAAACTAGAGCAATCCATTTGTCGTTCCGGTCCAG AAGATCAAATTTCAATCCTAGATGCTCGCAGAGCTTTGGAGTTCAAATCAGCCGACTACAAGTTGCTCAACCTCTTGCTT TACAAAATGAGGGGAGAAGAGGTGAATGAGTTCCACTTCGGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGA TAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAAGTTTATGGACCAA AACTCGGTTCACAAATGCTGGTGCGTTGGCAGCTGGCTTTGATTTTAACTCGTATTGTTCTACAGGCTGAGTACATTTCC GCTGTTAAACTACGGTTTGAAGAAAAACTAAACAAGCTAGAGCCGGAGCTGAGAGAAAAGTTCCCAATTCGTTATCAAGA GGAGCTTTCGAGAGGCAAAAGCATTGCGGAAATCTGGGAAGTGCCCCCATTTATCGATGAGACACCTTATAGCGCTTTGG TATCAAGCAAATGA |