Microexon ID Sm_GL377733:27691-27703:-
Species Selaginella moellendorffii
Coordinates GL377733:27691..27703
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCTGATTACGAG
Microexon Amino Acid seq LSDYE
Microexon-tag DNA Seq GGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA
Microexon-tag Amino Acid Seq GFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK
Microexon-tag spanning region27594-27808
Microexon-tag prediction score0.8751
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Sm_GL377733:27691-27703:- does not have available information here.
Microexon DNA seq GTCTGATTACGAG
Microexon Amino Acid seq LSDYE
Microexon-tag DNA Seq GGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA
Microexon-tag Amino Acid seq GFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK
Transcript ID Sm.31703.3
Gene ID Sm.31703
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Sm.31703.3
MQDIHDPVNDVDPFYGLKLELAARNLWTDRMANELLKGCHYLKLEQSICRSGPEDQISILDARRALEFKSADYKLLNLLL
YKMRGEEVNEFHFGFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYKVYGPKLGSQMLVRWQLALILTRIVLQAEYIS
AVKLRFEEKLNKLEPELREKFPIRYQEELSRGKSIAEIWEVPPFIDETPYSALVSSK*
CDS seq >Sm.31703.3
ATGCAGGATATCCATGACCCAGTCAATGACGTGGATCCCTTTTATGGACTTAAACTGGAACTCGCAGCTCGAAATCTCTG
GACGGATAGGATGGCAAATGAACTTTTGAAAGGATGCCATTACTTGAAACTAGAGCAATCCATTTGTCGTTCCGGTCCAG
AAGATCAAATTTCAATCCTAGATGCTCGCAGAGCTTTGGAGTTCAAATCAGCCGACTACAAGTTGCTCAACCTCTTGCTT
TACAAAATGAGGGGAGAAGAGGTGAATGAGTTCCACTTCGGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGTTAGCAGA
TAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAAGTTTATGGACCAA
AACTCGGTTCACAAATGCTGGTGCGTTGGCAGCTGGCTTTGATTTTAACTCGTATTGTTCTACAGGCTGAGTACATTTCC
GCTGTTAAACTACGGTTTGAAGAAAAACTAAACAAGCTAGAGCCGGAGCTGAGAGAAAAGTTCCCAATTCGTTATCAAGA
GGAGCTTTCGAGAGGCAAAAGCATTGCGGAAATCTGGGAAGTGCCCCCATTTATCGATGAGACACCTTATAGCGCTTTGG
TATCAAGCAAATGA