
Microexon ID | Sm_GL377705:150613-150625:+ |
Species | Selaginella moellendorffii | Coordinates | GL377705:150613..150625 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTGATTACGAG |
Microexon Amino Acid seq | LSDYE |
Microexon-tag DNA Seq | TGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA |
Microexon-tag Amino Acid Seq | CFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK |
Microexon-tag spanning region | 150507-150722 |
Microexon-tag prediction score | 0.8692 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Sm_GL377705:150613-150625:+ does not have available information here.
Microexon DNA seq | GTCTGATTACGAG |
Microexon Amino Acid seq | LSDYE |
Microexon-tag DNA Seq | TGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA |
Microexon-tag Amino Acid seq | CFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK |
Transcript ID | Sm.30840.1 |
Gene ID | Sm.30840 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Sm.30840.1 MSVNVVMQASTCRSGLRFLKPIHSFSSQGACQLAAPQQNQNLDLPHRLHVSLEALERSRTSLHDFCISHFMFHGLDPSNH EHNFKYLPVLAFTEAYVYEVDVEYEKALKKMQDIHDPVNDVDPFYGLKLELAARNLWTDRMANELLKGCHYLKLEQSICR SGPEDQISILDARRALEFKSADYKLLNLLLYKMRGEEVNEFHFCFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYKV YGPKLGSQMLAEYISAVKLRFEEKLNKLEPELREKFPIRYQEELSRGKSIAEIWEVPPFIDETPYSALVSSK* |
CDS seq | >Sm.30840.1 ATGAGTGTAAACGTGGTGATGCAGGCTAGCACTTGCAGGAGTGGCTTAAGATTTTTGAAGCCTATCCATTCTTTCTCATC TCAGGGAGCTTGTCAGCTTGCAGCTCCACAGCAAAACCAAAACCTTGACCTGCCTCATCGGCTTCATGTTTCATTGGAAG CTTTGGAACGCTCCAGAACATCACTCCATGATTTTTGCATCTCACATTTCATGTTCCATGGCCTGGATCCCAGCAACCAC GAACACAACTTCAAGTACTTGCCAGTTCTTGCTTTCACGGAGGCTTATGTGTATGAGGTCGATGTAGAATACGAGAAAGC TCTCAAGAAAATGCAGGATATCCATGACCCAGTCAATGACGTGGATCCCTTTTATGGACTTAAACTGGAACTCGCGGCTC GAAATCTCTGGACGGATAGGATGGCAAATGAACTTTTGAAAGGATGCCATTACTTGAAACTAGAGCAATCCATTTGTCGT TCCGGTCCAGAAGATCAAATTTCAATCCTAGATGCTCGCAGAGCTTTGGAGTTCAAATCAGCCGACTACAAGTTGCTCAA CCTCTTGCTTTACAAAATGAGGGGAGAAGAGGTGAATGAGTTCCACTTCTGCTTTCTAGAGTTGTCAAATCTTCTTGTGG AGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAAGTT TATGGACCAAAACTCGGTTCACAAATGCTGGCTGAGTACATTTCCGCTGTTAAACTACGGTTTGAAGAAAAACTAAACAA GCTAGAGCCGGAGCTGAGAGAAAAGTTCCCAATTCGTTATCAAGAGGAGCTTTCGAGAGGCAAAAGCATTGCGGAAATCT GGGAAGTGCCCCCATTTATCGATGAGACACCTTATAGCGCTTTGGTATCAAGCAAATGA |