Microexon ID Sm_GL377705:150613-150625:+
Species Selaginella moellendorffii
Coordinates GL377705:150613..150625
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCTGATTACGAG
Microexon Amino Acid seq LSDYE
Microexon-tag DNA Seq TGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA
Microexon-tag Amino Acid Seq CFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK
Microexon-tag spanning region150507-150722
Microexon-tag prediction score0.8692
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Sm_GL377705:150613-150625:+ does not have available information here.
Microexon DNA seq GTCTGATTACGAG
Microexon Amino Acid seq LSDYE
Microexon-tag DNA Seq TGCTTTCTAGAGTTGTCAAATCTTCTTGTGGAGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAA
Microexon-tag Amino Acid seq CFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYK
Transcript ID Sm.30840.1
Gene ID Sm.30840
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Sm.30840.1
MSVNVVMQASTCRSGLRFLKPIHSFSSQGACQLAAPQQNQNLDLPHRLHVSLEALERSRTSLHDFCISHFMFHGLDPSNH
EHNFKYLPVLAFTEAYVYEVDVEYEKALKKMQDIHDPVNDVDPFYGLKLELAARNLWTDRMANELLKGCHYLKLEQSICR
SGPEDQISILDARRALEFKSADYKLLNLLLYKMRGEEVNEFHFCFLELSNLLVELADNLSDYEEDVKDNSFNIVRVFYKV
YGPKLGSQMLAEYISAVKLRFEEKLNKLEPELREKFPIRYQEELSRGKSIAEIWEVPPFIDETPYSALVSSK*
CDS seq >Sm.30840.1
ATGAGTGTAAACGTGGTGATGCAGGCTAGCACTTGCAGGAGTGGCTTAAGATTTTTGAAGCCTATCCATTCTTTCTCATC
TCAGGGAGCTTGTCAGCTTGCAGCTCCACAGCAAAACCAAAACCTTGACCTGCCTCATCGGCTTCATGTTTCATTGGAAG
CTTTGGAACGCTCCAGAACATCACTCCATGATTTTTGCATCTCACATTTCATGTTCCATGGCCTGGATCCCAGCAACCAC
GAACACAACTTCAAGTACTTGCCAGTTCTTGCTTTCACGGAGGCTTATGTGTATGAGGTCGATGTAGAATACGAGAAAGC
TCTCAAGAAAATGCAGGATATCCATGACCCAGTCAATGACGTGGATCCCTTTTATGGACTTAAACTGGAACTCGCGGCTC
GAAATCTCTGGACGGATAGGATGGCAAATGAACTTTTGAAAGGATGCCATTACTTGAAACTAGAGCAATCCATTTGTCGT
TCCGGTCCAGAAGATCAAATTTCAATCCTAGATGCTCGCAGAGCTTTGGAGTTCAAATCAGCCGACTACAAGTTGCTCAA
CCTCTTGCTTTACAAAATGAGGGGAGAAGAGGTGAATGAGTTCCACTTCTGCTTTCTAGAGTTGTCAAATCTTCTTGTGG
AGCTAGCAGATAACTTGTCTGATTACGAGGAGGACGTCAAAGACAACTCATTCAACATAGTGCGCGTGTTTTACAAAGTT
TATGGACCAAAACTCGGTTCACAAATGCTGGCTGAGTACATTTCCGCTGTTAAACTACGGTTTGAAGAAAAACTAAACAA
GCTAGAGCCGGAGCTGAGAGAAAAGTTCCCAATTCGTTATCAAGAGGAGCTTTCGAGAGGCAAAAGCATTGCGGAAATCT
GGGAAGTGCCCCCATTTATCGATGAGACACCTTATAGCGCTTTGGTATCAAGCAAATGA