
Microexon ID | Sb_6:47149086-47149098:+ |
Species | Sorghum Bicolor | Coordinates | 6:47149086..47149098 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATGATTATGAG |
Microexon Amino Acid seq | LYDYE |
Microexon-tag DNA Seq | GACTTCTTGTCAGTCTCAGAATTTTTGGTTGAGATATCTGATGACCTGTATGATTATGAGGATGATGTTATGAACAATACTTTCAATATCCTTCGCATGTTTGCTGCA |
Microexon-tag Amino Acid Seq | DFLSVSEFLVEISDDLYDYEDDVMNNTFNILRMFAA |
Microexon-tag spanning region | 47148532-47149239 |
Microexon-tag prediction score | 0.9579 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES12266x |
Reference Transcript ID | EES12266 |
Gene ID | SORBI_3006G100800 |
Gene Name | NA |
Transcript ID | EES12266 |
Protein ID | |
Gene ID | SORBI_3006G100800 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EES12266 MNSLFASLAQNLKKLEAEPNQNRAREAEPRRAGEVRGGGAMEALLELEKVQRVLSLMSSRGLSHADSSGGGAAADRFLAQ FLLFMVQPFDSLTMENKFLLVSELLAKATPDTLEEMQHLTHLEANQDIPSGGLLQPIKKSKMHAENSTIQAVPMVGFDAM TRAKSTLEDFCRSYFMFHGLDVNEPQAIFKYLPVLCFTESYIYQLDASNEDCLHVVPNDNTSKVLGKKEEALIETSLSQM IEPLEGLLQCQGLMTDRLGTELKSGIQYWSLERKLCQALLRNEKISIEDVMKAIHLKSFDYRVLNLLMFQLTGQHVNELH MDFLSVSEFLVEISDDLYDYEDDVMNNTFNILRMFAAIYGPLEAPNMLAKCIGEAEEKYESFSKKLEPSLSGSYWRRCEE ATKEGGKISGHAYGTWNIPRVISNEDSFRRERLSKHDASAVII* |
CDS seq | >EES12266 ATGAATTCTCTGTTTGCTAGTCTCGCACAAAACCTGAAGAAACTCGAAGCGGAACCGAATCAAAACCGAGCGCGAGAAGC GGAGCCGCGGCGAGCCGGGGAGGTGCGAGGAGGAGGAGCAATGGAGGCGCTGCTGGAGCTCGAGAAGGTGCAGAGGGTGC TCTCCCTCATGAGTTCGCGCGGCCTCTCCCACGCCGACTCCAGCGGCGGCGGCGCTGCCGCTGACCGCTTCCTCGCCCAA TTCCTCCTCTTCATGGTGCAACCGTTTGATTCTCTTACCATGGAGAATAAGTTCCTTTTGGTCTCTGAGCTATTAGCAAA GGCTACTCCTGATACTTTGGAAGAAATGCAGCATCTCACCCATCTGGAAGCTAATCAAGATATACCTTCTGGAGGTTTAC TCCAGCCAATTAAGAAGTCTAAGATGCATGCCGAGAACTCAACCATTCAGGCTGTGCCGATGGTTGGTTTTGATGCGATG ACAAGAGCTAAGTCTACACTTGAAGATTTTTGCAGATCGTACTTTATGTTTCATGGTTTGGATGTTAACGAGCCACAAGC CATTTTCAAGTATCTACCTGTTCTTTGTTTCACAGAGAGCTACATATATCAGTTAGATGCTTCAAATGAAGACTGTTTAC ATGTAGTCCCAAACGACAACACTTCAAAAGTGTTGGGAAAGAAAGAAGAAGCTCTTATTGAAACATCCTTGTCTCAAATG ATTGAACCCCTTGAAGGCCTTCTTCAGTGTCAAGGATTAATGACAGATCGATTGGGAACTGAACTCAAATCAGGCATTCA GTATTGGTCTCTAGAGAGGAAGCTCTGCCAAGCATTACTAAGAAATGAGAAGATCTCTATTGAAGATGTTATGAAGGCAA TCCATCTCAAATCATTTGACTATCGAGTTCTTAACCTGTTGATGTTTCAACTTACTGGTCAGCATGTCAATGAATTGCAT ATGGACTTCTTGTCAGTCTCAGAATTTTTGGTTGAGATATCTGATGACCTGTATGATTATGAGGATGATGTTATGAACAA TACTTTCAATATCCTTCGCATGTTTGCTGCAATATATGGACCATTAGAGGCACCGAATATGCTGGCCAAGTGCATAGGCG AGGCTGAAGAGAAATATGAGAGTTTCTCAAAGAAATTGGAGCCTAGTCTCTCAGGCAGTTACTGGAGAAGATGTGAGGAA GCTACAAAGGAAGGCGGAAAAATATCAGGCCATGCATATGGAACATGGAATATCCCTCGTGTGATAAGCAATGAAGACTC TTTCCGACGTGAAAGATTGAGCAAACACGATGCTTCTGCTGTGATCATCTGA |
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