
Microexon ID | Ps_NW_020621936.1:8539951-8539963:- |
Species | Papaver somniferum | Coordinates | NW_020621936.1:8539951..8539963 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | GAATTTCTATCAGTCTCCGAATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTGGGA |
Microexon-tag Amino Acid Seq | EFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFVG |
Microexon-tag spanning region | 8539807-8540227 |
Microexon-tag prediction score | 0.9774 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026578434.1x |
Reference Transcript ID | XM_026578434.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026578434.1 |
Protein ID | XP_026434219.1 |
Gene ID | LOC113331793 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026434219.1 MEELGKLVNLQSILSFLEERHLSSNNQDSDRFLAEFTMFMAKQCGNLTMEAKFSLISDYLPKISPAILEEAALCLTGEGV QLGHQQNCGDLPTEVYCESESNVDVMGGYVEDMAMVGLESMQRANSTLEDFCRFYFIFHEMDVKKPELVFKYLPMLSFTE SYIYQLDSYNEQILSTTAGTTDAKKPERNHIMKDHLLKVIKNDPFGPLVSVLEDHGLMTERIRAELRSGEEYWLLERKLC NSLAAKQQVLIEDVMRAIHLKSFDYRVLNLLLYQLRRTKVNDLHMEFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFV GIYGASKAPSMLAQCITEAEEKYVGLSKTLEENLSLNCWRRCEEATREGGKNSVHSFGTWHIPTVISDEGLYRLNNTQNR LDS* |
CDS seq | >XM_026578434.1 ATGGAAGAACTTGGGAAACTAGTGAACTTGCAGAGCATTCTCTCTTTCTTAGAAGAACGTCATCTCTCTTCAAATAACCA GGACTCTGATCGTTTCCTTGCCGAGTTCACAATGTTCATGGCAAAGCAATGCGGAAATCTCACAATGGAGGCGAAGTTCA GTTTGATATCTGATTATCTTCCTAAGATTTCACCTGCAATTCTCGAGGAAGCTGCATTGTGTCTTACCGGAGAAGGTGTG CAATTAGGTCATCAACAAAATTGTGGTGATCTTCCTACTGAAGTGTACTGTGAGAGTGAATCCAATGTTGATGTAATGGG AGGTTATGTTGAAGATATGGCGATGGTTGGATTAGAGTCGATGCAGCGAGCAAATTCCACTCTCGAGGATTTTTGTAGGT TTTACTTTATATTTCATGAGATGGATGTGAAAAAACCAGAATTGGTGTTCAAGTACCTCCCAATGCTTTCATTTACGGAA AGTTACATTTATCAGCTTGATAGCTATAATGAACAAATATTATCGACGACAGCTGGTACAACTGATGCTAAAAAGCCAGA ACGTAATCATATAATGAAAGATCATCTCCTAAAAGTTATTAAAAATGATCCATTTGGACCTCTCGTCAGTGTACTAGAAG ATCATGGCCTTATGACAGAACGAATTAGAGCAGAGCTCAGGTCTGGGGAAGAATATTGGCTTCTAGAGAGGAAATTATGT AATTCACTAGCGGCCAAGCAACAGGTTTTGATTGAAGACGTGATGAGAGCAATTCATCTAAAATCCTTCGATTATCGGGT TTTGAATCTTTTGTTGTATCAGCTAAGGCGAACAAAGGTTAACGACTTACATATGGAATTTCTATCAGTCTCCGAATTCC TTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTG GGAATTTATGGAGCTTCTAAGGCTCCATCCATGTTGGCACAATGCATTACTGAGGCTGAAGAGAAGTATGTAGGCCTTTC AAAAACTTTGGAGGAAAATCTTTCCTTGAATTGCTGGCGAAGATGTGAAGAAGCCACAAGAGAAGGTGGGAAGAATTCAG TACATTCTTTTGGGACATGGCATATACCAACTGTGATTTCAGACGAAGGACTTTATCGACTAAATAACACTCAGAATCGA CTAGACAGCTGA |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | GAATTTCTATCAGTCTCCGAATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTGGGA |
Microexon-tag Amino Acid seq | EFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFVG |
Transcript ID | XM_026578434.1 |
Gene ID | Ps.73149 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026578434.1 MEELGKLVNLQSILSFLEERHLSSNNQDSDRFLAEFTMFMAKQCGNLTMEAKFSLISDYLPKISPAILEEAALCLTGEGV QLGHQQNCGDLPTEVYCESESNVDVMGGYVEDMAMVGLESMQRANSTLEDFCRFYFIFHEMDVKKPELVFKYLPMLSFTE SYIYQLDSYNEQILSTTAGTTDAKKPERNHIMKDHLLKVIKNDPFGPLVSVLEDHGLMTERIRAELRSGEEYWLLERKLC NSLAAKQQVLIEDVMRAIHLKSFDYRVLNLLLYQLRRTKVNDLHMEFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFV GIYGASKAPSMLAQCITEAEEKYVGLSKTLEENLSLNCWRRCEEATREGGKNSVHSFGTWHIPTVISDEGLYRLNNTQNR LDS* |
CDS seq | >XM_026578434.1 ATGGAAGAACTTGGGAAACTAGTGAACTTGCAGAGCATTCTCTCTTTCTTAGAAGAACGTCATCTCTCTTCAAATAACCA GGACTCTGATCGTTTCCTTGCCGAGTTCACAATGTTCATGGCAAAGCAATGCGGAAATCTCACAATGGAGGCGAAGTTCA GTTTGATATCTGATTATCTTCCTAAGATTTCACCTGCAATTCTCGAGGAAGCTGCATTGTGTCTTACCGGAGAAGGTGTG CAATTAGGTCATCAACAAAATTGTGGTGATCTTCCTACTGAAGTGTACTGTGAGAGTGAATCCAATGTTGATGTAATGGG AGGTTATGTTGAAGATATGGCGATGGTTGGATTAGAGTCGATGCAGCGAGCAAATTCCACTCTCGAGGATTTTTGTAGGT TTTACTTTATATTTCATGAGATGGATGTGAAAAAACCAGAATTGGTGTTCAAGTACCTCCCAATGCTTTCATTTACGGAA AGTTACATTTATCAGCTTGATAGCTATAATGAACAAATATTATCGACGACAGCTGGTACAACTGATGCTAAAAAGCCAGA ACGTAATCATATAATGAAAGATCATCTCCTAAAAGTTATTAAAAATGATCCATTTGGACCTCTCGTCAGTGTACTAGAAG ATCATGGCCTTATGACAGAACGAATTAGAGCAGAGCTCAGGTCTGGGGAAGAATATTGGCTTCTAGAGAGGAAATTATGT AATTCACTAGCGGCCAAGCAACAGGTTTTGATTGAAGACGTGATGAGAGCAATTCATCTAAAATCCTTCGATTATCGGGT TTTGAATCTTTTGTTGTATCAGCTAAGGCGAACAAAGGTTAACGACTTACATATGGAATTTCTATCAGTCTCCGAATTCC TTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTG GGAATTTATGGAGCTTCTAAGGCTCCATCCATGTTGGCACAATGCATTACTGAGGCTGAAGAGAAGTATGTAGGCCTTTC AAAAACTTTGGAGGAAAATCTTTCCTTGAATTGCTGGCGAAGATGTGAAGAAGCCACAAGAGAAGGTGGGAAGAATTCAG TACATTCTTTTGGGACATGGCATATACCAACTGTGATTTCAGACGAAGGACTTTATCGACTAAATAACACTCAGAATCGA CTAGACAGCTGA |