
Microexon ID | Ps_NC_039359.1:34115955-34115967:+ |
Species | Papaver somniferum | Coordinates | NC_039359.1:34115955..34115967 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | AAATTTCTATCAGTCTCCGAATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTGGGA |
Microexon-tag Amino Acid Seq | KFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFVG |
Microexon-tag spanning region | 34115691-34116111 |
Microexon-tag prediction score | 0.9713 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026590969.1x |
Reference Transcript ID | XM_026590969.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026590969.1 |
Protein ID | XP_026446754.1 |
Gene ID | LOC113347332 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XP_026446754.1 MEEMGKLVNLQSILSFIEERHLSSNHQDSDRFLAEFTMFMAKQCGNLTMEAKFSLISDYLPKISPAVLEEAALCLTGEGV QLGHQQNCVDLPTEVYCESESNVDVMGGDVEDMAMVGLESMQRANSTLEDFCRFYFIFHEMDVKKPELVFKYLPMLSFTE SYIYQLDSYNERILHLSMTAGTTDAKKPERNHIMKGHLLKVIKNDPFGPLFSVLEDHGLMTERIRAELRSGEEYWLLERK LCNSLAAKQQVLIEDVMRAIHLKSFDYRVLNLLLYQLRRTKVNDLHMKFLSVSEFLVEVSDDLFDYEDDVVENSFNILRM FVGIYGASKAPSMLAQCITEAEEKYVGLSKTLEENLSLNCWRRCEEATREGGKNSVHCFGTWHIPTVISDEGLYRLNNTQ N* |
CDS seq | >XM_026590969.1 ATGGAAGAAATGGGGAAACTAGTGAACTTGCAAAGCATTCTCTCTTTCATCGAGGAACGTCACCTCTCTTCAAATCACCA GGACTCTGATCGTTTCCTAGCTGAGTTCACAATGTTCATGGCAAAGCAATGCGGGAATCTCACAATGGAGGCGAAGTTCA GTTTGATATCCGATTATCTTCCTAAGATTTCACCTGCAGTTCTCGAGGAAGCTGCATTGTGTCTTACTGGAGAAGGTGTG CAATTAGGTCATCAACAAAATTGTGTTGATCTTCCTACTGAAGTGTACTGTGAGAGCGAATCCAATGTTGATGTAATGGG AGGTGATGTTGAAGATATGGCGATGGTTGGATTAGAGTCAATGCAGCGAGCAAATTCCACTCTTGAGGATTTTTGTAGGT TTTACTTTATATTTCATGAGATGGATGTGAAAAAACCAGAATTGGTGTTCAAGTACCTCCCAATGCTTTCATTTACTGAA AGTTACATTTATCAGCTTGATAGCTATAATGAACGAATATTACATTTATCAATGACTGCTGGTACAACTGATGCTAAAAA GCCAGAACGTAATCATATAATGAAAGGTCATCTCCTAAAAGTTATTAAAAATGATCCATTTGGACCTCTCTTCAGTGTAC TAGAAGATCATGGCCTTATGACAGAACGAATTAGAGCAGAGCTCAGGTCTGGGGAAGAATATTGGCTTCTAGAGAGGAAA TTATGTAATTCACTAGCGGCCAAGCAACAGGTTTTGATTGAAGACGTGATGAGAGCAATTCATCTAAAATCCTTCGATTA TCGGGTTTTGAATCTTTTGTTGTATCAGCTAAGGCGAACAAAGGTTAATGACTTACATATGAAATTTCTATCAGTCTCCG AATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATG TTTGTGGGAATTTATGGAGCTTCTAAGGCTCCATCCATGTTGGCACAATGCATTACTGAGGCTGAAGAGAAGTATGTAGG CCTTTCAAAAACTTTGGAGGAAAATCTTTCCTTGAATTGCTGGCGAAGATGTGAAGAAGCCACAAGAGAAGGTGGGAAGA ATTCAGTACATTGTTTTGGGACATGGCATATACCAACTGTGATTTCAGATGAAGGACTTTATCGACTAAATAACACTCAG AATTGA |
Microexon DNA seq | GTTTGATTATGAG |
Microexon Amino Acid seq | LFDYE |
Microexon-tag DNA Seq | AAATTTCTATCAGTCTCCGAATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATGTTTGTGGGA |
Microexon-tag Amino Acid seq | KFLSVSEFLVEVSDDLFDYEDDVVENSFNILRMFVG |
Transcript ID | XM_026590971.1 |
Gene ID | Ps.9372 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >XM_026590971.1 MEEMGKLVNLQSILSFIEERHLSSNHQDSDRFLAEFTMFMAKQCGNLTMEAKFSLISDYLPKISPAVLEEAALCLTGEGV QLGHQQNCVDLPTEVYCESESNVDVMGGDVEDMAMVGLESMQRANSTLEDFCRFYFIFHEMDVKKPELVFKYLPMLSFTE SYIYQLDSYNERILHLSMTAGTTDAKKPERNHIMKGHLLKVIKNDPFGPLFSVLEDHGLMTERIRAELRSGEEYWLLERK LCNSLAAKQQVLIEDVMRAIHLKSFDYRVLNLLLYQLRRTKVNDLHMKFLSVSEFLVEVSDDLFDYEDDVVENSFNILRM FVGIYGASKAPSMLLWAYNEFHIQFGFPACHAKYFCIWRNLDFQ* |
CDS seq | >XM_026590971.1 ATGGAAGAAATGGGGAAACTAGTGAACTTGCAAAGCATTCTCTCTTTCATCGAGGAACGTCACCTCTCTTCAAATCACCA GGACTCTGATCGTTTCCTAGCTGAGTTCACAATGTTCATGGCAAAGCAATGCGGGAATCTCACAATGGAGGCGAAGTTCA GTTTGATATCCGATTATCTTCCTAAGATTTCACCTGCAGTTCTCGAGGAAGCTGCATTGTGTCTTACTGGAGAAGGTGTG CAATTAGGTCATCAACAAAATTGTGTTGATCTTCCTACTGAAGTGTACTGTGAGAGCGAATCCAATGTTGATGTAATGGG AGGTGATGTTGAAGATATGGCGATGGTTGGATTAGAGTCAATGCAGCGAGCAAATTCCACTCTTGAGGATTTTTGTAGGT TTTACTTTATATTTCATGAGATGGATGTGAAAAAACCAGAATTGGTGTTCAAGTACCTCCCAATGCTTTCATTTACTGAA AGTTACATTTATCAGCTTGATAGCTATAATGAACGAATATTACATTTATCAATGACTGCTGGTACAACTGATGCTAAAAA GCCAGAACGTAATCATATAATGAAAGGTCATCTCCTAAAAGTTATTAAAAATGATCCATTTGGACCTCTCTTCAGTGTAC TAGAAGATCATGGCCTTATGACAGAACGAATTAGAGCAGAGCTCAGGTCTGGGGAAGAATATTGGCTTCTAGAGAGGAAA TTATGTAATTCACTAGCGGCCAAGCAACAGGTTTTGATTGAAGACGTGATGAGAGCAATTCATCTAAAATCCTTCGATTA TCGGGTTTTGAATCTTTTGTTGTATCAGCTAAGGCGAACAAAGGTTAATGACTTACATATGAAATTTCTATCAGTCTCCG AATTCCTTGTCGAGGTATCTGATGACCTGTTTGATTATGAGGATGATGTGGTAGAGAACAGCTTCAACATTCTGCGTATG TTTGTGGGAATTTATGGAGCTTCTAAGGCTCCATCCATGTTGTTGTGGGCTTACAATGAATTTCATATTCAGTTCGGCTT CCCTGCCTGTCATGCTAAATATTTTTGTATTTGGAGAAACCTTGATTTTCAGTAG |