Microexon ID Pp_26:1867603-1867615:-
Species Physcomitrium patens
Coordinates 26:1867603..1867615
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTCGACTATGAG
Microexon Amino Acid seq LFDYE
Microexon-tag DNA Seq GAGTTTCTCTCCGTTTCGGAACTACTTGTAGAGATAAGCGATGATTTGTTCGACTATGAGGAAGATGTAGTCAAAAACACCTTTAATGTGCTTCGTATGTTTGTTCAC
Microexon-tag Amino Acid Seq EFLSVSELLVEISDDLFDYEEDVVKNTFNVLRMFVH
Microexon-tag spanning region1867427-1867829
Microexon-tag prediction score0.9025
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c26_3770V3.1x
Reference Transcript ID Pp3c26_3770V3.1
Gene ID Pp3c26_3770
Gene Name NA
Transcript ID Pp3c26_3770V3.1
Protein ID Pp3c26_3770V3.1
Gene ID Pp3c26_3770
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp3c26_3770V3.1
MEALERLEVVHVHLQLLHTHGIATSHDPSNRFLADFLLLLGESGKSYVEMQRLCEVLLDAVPKMKGSSLFDEMARATSSE
DKLTMENFTLHKGLNHRGGHVRADSVTLQMSEVVGEEVLTTQQRRSAPCERSVLSCMISFNSMERARSTLEDFCRSYFMF
HGMDAQNPTHIFRYLPLLVFVESFIYQLDEENEDQLCLSEGTGGSNRSHDVSSEFAYGLGKDPFTGMRSILQQQDLLTER
IDNELKDGLKYWCLEQSLCTALSTGKEVKPEDVLRALRLKSFDYRILNLLLYGLLHEPVNEAHFEFLSVSELLVEISDDL
FDYEEDVVKNTFNVLRMFVHTYGSNDAPIKLAQFISKIEDEYQALLVALEPDIRDKYTQRCEEAVKEGGSKSVHVLGDWT
IPPLITDENAFRIRVNEDA*
CDS seq >Pp3c26_3770V3.1
ATGGAGGCCTTGGAGCGTCTGGAAGTAGTTCATGTCCACTTGCAGCTGCTCCACACGCACGGGATCGCCACCTCGCATGA
CCCATCCAATCGTTTCCTCGCCGATTTCCTGCTGCTGCTGGGTGAGTCAGGCAAGAGTTATGTCGAGATGCAGAGGTTAT
GCGAAGTCTTACTTGACGCGGTTCCAAAGATGAAGGGTTCGTCGTTGTTTGATGAGATGGCGAGGGCAACTTCCTCGGAA
GACAAGCTCACGATGGAGAATTTCACGCTACACAAGGGTTTGAATCACCGAGGAGGTCATGTACGTGCCGATTCTGTAAC
TTTGCAAATGAGCGAAGTTGTTGGTGAAGAAGTACTGACTACACAACAACGACGAAGTGCTCCTTGTGAGCGTTCTGTGT
TGAGTTGCATGATTAGTTTTAACAGCATGGAGCGAGCTCGCTCCACACTAGAGGATTTCTGCAGATCGTACTTTATGTTT
CATGGCATGGACGCACAGAATCCCACACATATCTTTCGCTATCTCCCGCTCCTTGTTTTTGTCGAGTCCTTCATATATCA
GCTGGATGAGGAGAATGAAGATCAACTATGCTTATCGGAAGGGACGGGTGGTTCCAATCGGTCACATGATGTCTCAAGTG
AATTTGCATACGGTTTAGGGAAGGACCCATTCACAGGAATGCGGTCTATACTTCAACAACAGGATTTACTAACGGAGAGG
ATTGATAATGAACTAAAGGATGGTCTAAAGTATTGGTGTTTGGAGCAGTCCCTTTGTACTGCCCTCTCAACTGGAAAAGA
GGTAAAGCCTGAAGATGTTTTACGAGCTCTACGACTCAAATCATTTGACTATCGTATACTTAACCTTCTTCTATATGGCT
TGCTCCATGAACCGGTCAATGAGGCTCATTTTGAGTTTCTCTCCGTTTCGGAACTACTTGTAGAGATAAGCGATGATTTG
TTCGACTATGAGGAAGATGTAGTCAAAAACACCTTTAATGTGCTTCGTATGTTTGTTCACACGTATGGGTCTAATGATGC
CCCCATCAAGCTCGCTCAATTCATTAGTAAAATTGAAGACGAATACCAAGCACTGTTAGTGGCTTTGGAACCGGATATTC
GAGATAAATACACACAGCGGTGTGAGGAGGCTGTAAAAGAAGGGGGGAGCAAGTCTGTGCACGTTCTAGGAGATTGGACA
ATTCCTCCCCTCATCACTGACGAAAATGCCTTCCGCATTCGGGTCAATGAAGATGCATGA
Microexon DNA seq GTTCGACTATGAG
Microexon Amino Acid seq LFDYE
Microexon-tag DNA Seq GAGTTTCTCTCCGTTTCGGAACTACTTGTAGAGATAAGCGATGATTTGTTCGACTATGAGGAAGATGTAGTCAAAAACACCTTTAATGTGCTTCGTATGTTTGTTCAC
Microexon-tag Amino Acid seq EFLSVSELLVEISDDLFDYEEDVVKNTFNVLRMFVH
Transcript ID Pp.16980.1
Gene ID Pp.16980
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Pp.16980.1
MFHGMDAQNPTHIFRYLPLLVFVESFIYQLDEENEDQLCLSEGTGGSNRSHDVSSEFAYGLGKDPFTGMRSILQQQDLLT
ERIDNELKDGLKYWCLEQSLCTALSTGKEVKPEDVLRALRLKSFDYRILNLLLYGLLHEPVNEAHFEFLSVSELLVEISD
DLFDYEEDVVKNTFNVLRMFVHTYGSNDAPIKLAQFISKIEDEYQALLVALEPDIRDKYTQRCEEAVKEGGSKSVHVLGD
WTIPPLITDENAFRIRVNEDA*
CDS seq >Pp.16980.1
ATGTTTCATGGCATGGACGCACAGAATCCCACACATATCTTTCGCTATCTCCCGCTCCTTGTTTTTGTCGAGTCCTTCAT
ATATCAGCTGGATGAGGAGAATGAAGATCAACTATGCTTATCGGAAGGGACGGGTGGTTCCAATCGGTCACATGATGTCT
CAAGTGAATTTGCATACGGTTTAGGGAAGGACCCATTCACAGGAATGCGGTCTATACTTCAACAACAGGATTTACTAACG
GAGAGGATTGATAATGAACTAAAGGATGGTCTAAAGTATTGGTGTTTGGAGCAGTCCCTTTGTACTGCCCTCTCAACTGG
AAAAGAGGTAAAGCCTGAAGATGTTTTACGAGCTCTACGACTCAAATCATTTGACTATCGTATACTTAACCTTCTTCTAT
ATGGCTTGCTCCATGAACCGGTCAATGAGGCTCATTTTGAGTTTCTCTCCGTTTCGGAACTACTTGTAGAGATAAGCGAT
GATTTGTTCGACTATGAGGAAGATGTAGTCAAAAACACCTTTAATGTGCTTCGTATGTTTGTTCACACGTATGGGTCTAA
TGATGCCCCCATCAAGCTCGCTCAATTCATTAGTAAAATTGAAGACGAATACCAAGCACTGTTAGTGGCTTTGGAACCGG
ATATTCGAGATAAATACACACAGCGGTGTGAGGAGGCTGTAAAAGAAGGGGGGAGCAAGTCTGTGCACGTTCTAGGAGAT
TGGACAATTCCTCCCCTCATCACTGACGAAAATGCCTTCCGCATTCGGGTCAATGAAGATGCATGA