
Microexon ID | Os_4:22476980-22476992:+ |
Species | Oryza sativa | Coordinates | 4:22476980..22476992 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATGATTATGAG |
Microexon Amino Acid seq | LYDYE |
Microexon-tag DNA Seq | GAGTTCTTGTCAATTTCAGAGTTTTTAGTGGAGATATCTGATGATCTGTATGATTATGAGGATGATGTGATGAACAATACTTTTAACATCCTCCGTATGTTTGCTGCA |
Microexon-tag Amino Acid Seq | EFLSISEFLVEISDDLYDYEDDVMNNTFNILRMFAA |
Microexon-tag spanning region | 22476521-22477127 |
Microexon-tag prediction score | 0.9532 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0451100-01x |
Reference Transcript ID | Os04t0451100-01 |
Gene ID | Os04g0451100 |
Gene Name | NA |
Transcript ID | Os04t0451100-01 |
Protein ID | Os04t0451100-01 |
Gene ID | Os04g0451100 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os04t0451100-01 MEALLKLEKVQRVLSLMGSRGLSGSGSDSGASDGGGGDRFLAHFLLFLVQPFDSLSMEKKALLVSDLLRKVNVDTLEEVC HLGSIECTSGEGRIIPASTSDQDISLGDPLQPNKKLKLHAEKLTVQEAPMVGFHAMRRANSTIEDFVRTVRSYFMFHGLD VNKAQSIFKFLPVLCFTESYIYQLDDLNEYNLQMVPGNDASLTVLERENRTSNEASLTGMLNVLDDLLQRQGLMTDQLRN ELKSGIQYWSLERKLCQALSRNDKISIEDVMEAIHLKSFDYRVLNLLMYRLTGQQVNEVHMEFLSISEFLVEISDDLYDY EDDVMNNTFNILRMFAAIYGPSEAPKMLAKCIGEAEEKYERFSKKLDPTLSGSYWRRCEEATKEGGKMSGHAYGTWNIPP LIRDEEFFRLERSNKRDASAITIT* |
CDS seq | >Os04t0451100-01 ATGGAGGCGCTGCTGAAGCTGGAGAAGGTGCAGAGGGTGCTCTCCCTGATGGGTTCGCGTGGCCTCTCCGGCTCCGGCTC CGACTCCGGCGCCAGCGACGGCGGCGGCGGCGACCGATTCCTCGCCCACTTCCTCCTCTTCCTGGTGCAACCGTTTGATT CACTTAGCATGGAGAAAAAAGCTCTATTGGTCTCTGACCTGTTAAGAAAGGTCAATGTTGATACTCTTGAAGAAGTGTGC CACCTTGGCAGCATAGAATGTACTAGTGGTGAAGGAAGGATCATTCCTGCTTCAACTTCTGATCAAGATATATCTTTGGG AGATCCACTACAGCCAAATAAGAAGTTGAAGTTGCATGCCGAGAAACTAACTGTTCAGGAGGCACCTATGGTTGGGTTTC ATGCAATGAGGAGAGCTAATTCTACGATTGAAGATTTTGTGCGTACTGTTCGGTCATATTTCATGTTTCATGGTTTAGAT GTCAACAAAGCACAATCTATTTTCAAGTTTCTTCCTGTTCTTTGTTTCACCGAAAGCTACATATACCAGTTAGATGATTT AAATGAATATAACTTGCAGATGGTCCCAGGTAACGATGCTTCCTTAACAGTGTTGGAAAGGGAAAACAGAACTTCCAATG AAGCGTCCTTGACTGGCATGCTCAATGTCCTTGACGATCTTCTTCAACGCCAGGGGCTAATGACAGATCAATTGCGAAAT GAACTAAAGTCTGGCATTCAGTATTGGTCTCTAGAGAGAAAGCTTTGCCAAGCATTGTCGAGAAATGACAAGATATCAAT TGAAGATGTGATGGAAGCAATCCATCTGAAATCGTTTGATTACCGAGTTCTTAATCTGCTGATGTATCGTCTAACTGGTC AGCAGGTTAATGAAGTGCATATGGAGTTCTTGTCAATTTCAGAGTTTTTAGTGGAGATATCTGATGATCTGTATGATTAT GAGGATGATGTGATGAACAATACTTTTAACATCCTCCGTATGTTTGCTGCAATTTATGGACCTTCAGAGGCACCAAAGAT GTTGGCCAAGTGCATAGGTGAAGCTGAGGAGAAATATGAGAGATTCTCTAAGAAATTGGATCCTACCCTCTCAGGAAGTT ATTGGAGAAGATGCGAGGAAGCTACAAAGGAAGGTGGAAAAATGTCAGGCCATGCATATGGCACATGGAATATCCCTCCT TTGATAAGAGATGAAGAATTTTTCCGCCTTGAAAGATCAAACAAACGCGACGCCTCTGCTATAACCATCACATGA |
Microexon DNA seq | GTATGATTATGAG |
Microexon Amino Acid seq | LYDYE |
Microexon-tag DNA Seq | GAGTTCTTGTCAATTTCAGAGTTTTTAGTGGAGATATCTGATGATCTGTATGATTATGAGGATGATGTGATGAACAATACTTTTAACATCCTCCGTATGTTTGCTGCA |
Microexon-tag Amino Acid seq | EFLSISEFLVEISDDLYDYEDDVMNNTFNILRMFAA |
Transcript ID | Os.22800.1 |
Gene ID | Os.22800 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os.22800.1 MEALLKLEKVQRVLSLMGSRGLSGSGSDSGASDGGGGDRFLAHFLLFLVQPFDSLSMEKKALLVSDLLRKVNVDTLEEVC HLGSIECTSGEGRIIPASTSDQDISLGDPLQPNKKLKLHAEKLTVQEAPMVGFHAMRRANSTIEDFCRSYFMFHGLDVNK AQSIFKFLPVLCFTESYIYQLDDLNEYNLQMVPGNDASLTVLERENRTSNEASLTGMLNVLDDLLQRQGLMTDQLRNELK SGIQYWSLERKLCQALSRNDKISIEDVMEAIHLKSFDYRVLNLLMYRLTGQQVNEVHMEFLSISEFLVEISDDLYDYEDD VMNNTFNILRMFAAIYGPSEAPKMLAKCIGEAEEKYERFSKKLDPTLSGSYWRRCEEATKEGGKMSGHAYGTWNIPPLIR DEEFFRLERSNKRDASAITIT* |
CDS seq | >Os.22800.1 ATGGAGGCGCTGCTGAAGCTGGAGAAGGTGCAGAGGGTGCTCTCCCTGATGGGTTCGCGTGGCCTCTCCGGCTCCGGCTC CGACTCCGGCGCCAGCGACGGCGGCGGCGGCGACCGATTCCTCGCCCACTTCCTCCTCTTCCTGGTGCAACCGTTTGATT CACTTAGCATGGAGAAAAAAGCTCTATTGGTCTCTGACCTGTTAAGAAAGGTCAATGTTGATACTCTTGAAGAAGTGTGC CACCTTGGCAGCATAGAATGTACTAGTGGTGAAGGAAGGATCATTCCTGCTTCAACTTCTGATCAAGATATATCTTTGGG AGATCCACTACAGCCAAATAAGAAGTTGAAGTTGCATGCCGAGAAACTAACTGTTCAGGAGGCACCTATGGTTGGGTTTC ATGCAATGAGGAGAGCTAATTCTACGATTGAAGATTTTTGCAGGTCATATTTCATGTTTCATGGTTTAGATGTCAACAAA GCACAATCTATTTTCAAGTTTCTTCCTGTTCTTTGTTTCACCGAAAGCTACATATACCAGTTAGATGATTTAAATGAATA TAACTTGCAGATGGTCCCAGGTAACGATGCTTCCTTAACAGTGTTGGAAAGGGAAAACAGAACTTCCAATGAAGCGTCCT TGACTGGCATGCTCAATGTCCTTGACGATCTTCTTCAACGCCAGGGGCTAATGACAGATCAATTGCGAAATGAACTAAAG TCTGGCATTCAGTATTGGTCTCTAGAGAGAAAGCTTTGCCAAGCATTGTCGAGAAATGACAAGATATCAATTGAAGATGT GATGGAAGCAATCCATCTGAAATCGTTTGATTACCGAGTTCTTAATCTGCTGATGTATCGTCTAACTGGTCAGCAGGTTA ATGAAGTGCATATGGAGTTCTTGTCAATTTCAGAGTTTTTAGTGGAGATATCTGATGATCTGTATGATTATGAGGATGAT GTGATGAACAATACTTTTAACATCCTCCGTATGTTTGCTGCAATTTATGGACCTTCAGAGGCACCAAAGATGTTGGCCAA GTGCATAGGTGAAGCTGAGGAGAAATATGAGAGATTCTCTAAGAAATTGGATCCTACCCTCTCAGGAAGTTATTGGAGAA GATGCGAGGAAGCTACAAAGGAAGGTGGAAAAATGTCAGGCCATGCATATGGCACATGGAATATCCCTCCTTTGATAAGA GATGAAGAATTTTTCCGCCTTGAAAGATCAAACAAACGCGACGCCTCTGCTATAACCATCACATGA |