
Microexon ID | Hv_2H:504845478-504845490:+ |
Species | Hordeum Vulgare | Coordinates | 2H:504845478..504845490 |
Microexon Cluster ID | MEP33 |
Size | 13 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 47,13,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATGATTATGAG |
Microexon Amino Acid seq | LYDYE |
Microexon-tag DNA Seq | GATTTCTTGTCTGTCTCAGAATTTTTAGTTGAGATATGTGATGACCTGTATGATTATGAGGACGATGTGGTTAACAATACTTTTAACATCCTCCGCATGTTTGCTGCG |
Microexon-tag Amino Acid Seq | DFLSVSEFLVEICDDLYDYEDDVVNNTFNILRMFAA |
Microexon-tag spanning region | 504845034-504845626 |
Microexon-tag prediction score | 0.9199 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.2HG0172360.1x |
Reference Transcript ID | HORVU.MOREX.r3.2HG0172360.1 |
Gene ID | HORVU.MOREX.r3.2HG0172360 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.2HG0172360.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.2HG0172360 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >HORVU.MOREX.r3.2HG0172360.1 MEALLELEKVQRVLSLMGSRGLSDSNGSGGGDRFLAHFLLFLAQPFDSLAIEKKVILISELLKEVNSDTLKEVQRLASLD GTNREDEPTKQFKMDAEKLIIHDAPMIGFDAMMRANSIQDAPMIGFDAMMRANSIQDAPMIGFDAMMRANSTLEDFCRSY FIFHGLDVNRPHSVFKFLPFLSFTESYIYQLDASNEDSLQLVPDNNASSTVLQRKIQGSSQTSLSDMLDPLDNLLQCQGL MTDQLRNELKSGIQYWSLERKLCQALSRSDKISIEDVMEAIHLKSFDYRVLNLIMYQLTGQKVNDLHMDFLSVSEFLVEI CDDLYDYEDDVVNNTFNILRMFAAIYGPLDAPKMLAKCIGEAEEKYESFSKKLDPNISRSYWRRCEEATKEGGEISGHTY GTWNIPPLIRDEESFRLDRSSRGDASAMAIR* |
CDS seq | >HORVU.MOREX.r3.2HG0172360.1 ATGGAGGCGCTGCTGGAGCTAGAAAAGGTGCAGAGGGTGCTCTCGCTCATGGGCTCCCGTGGCCTCTCCGATTCCAACGG CAGCGGCGGCGGGGACCGCTTCCTCGCCCACTTCCTCCTCTTCCTGGCGCAACCGTTTGATTCACTTGCCATTGAGAAGA AGGTCATATTAATCTCTGAGCTTTTGAAAGAGGTTAATTCTGATACTCTCAAAGAAGTTCAACGTCTAGCCAGTCTGGAC GGTACTAATAGGGAAGATGAACCAACTAAGCAGTTCAAGATGGATGCTGAGAAATTAATCATTCATGATGCACCTATGAT TGGATTCGATGCAATGATGAGAGCCAATTCCATCCAGGATGCACCTATGATTGGATTCGATGCAATGATGAGAGCCAATT CCATTCAGGATGCACCTATGATTGGATTCGATGCAATGATGAGAGCCAATTCCACGCTTGAAGATTTTTGCAGGTCATAC TTCATATTTCATGGTTTGGATGTTAACAGACCACACTCTGTTTTCAAGTTTCTTCCTTTTCTTTCTTTTACAGAGAGCTA CATATACCAGTTAGATGCTTCAAATGAAGACAGTTTGCAATTAGTTCCAGACAACAACGCTTCTTCAACAGTATTGCAAA GGAAAATACAAGGTTCTAGTCAGACGTCCTTGTCTGACATGCTTGATCCCCTTGATAATCTTCTTCAGTGCCAGGGGTTA ATGACAGATCAATTGCGAAATGAACTCAAATCTGGCATCCAGTATTGGTCTCTAGAGAGGAAGCTTTGTCAAGCATTATC AAGAAGTGATAAGATATCTATCGAAGATGTTATGGAAGCAATCCATCTCAAATCATTTGACTATCGAGTCCTTAATCTGA TTATGTATCAGCTTACTGGTCAGAAGGTCAATGACTTGCATATGGATTTCTTGTCTGTCTCAGAATTTTTAGTTGAGATA TGTGATGACCTGTATGATTATGAGGACGATGTGGTTAACAATACTTTTAACATCCTCCGCATGTTTGCTGCGATATATGG ACCTTTAGATGCACCAAAGATGCTGGCCAAGTGCATTGGTGAAGCTGAGGAAAAATATGAGAGCTTCTCAAAGAAATTGG ACCCTAACATTTCAAGAAGTTACTGGAGAAGATGTGAGGAGGCTACAAAGGAAGGTGGAGAAATATCAGGCCATACGTAT GGCACATGGAATATCCCTCCTCTGATAAGAGATGAAGAATCATTTCGCCTTGATAGATCGAGCAGAGGTGATGCTTCTGC CATGGCCATAAGATGA |
Hv_2H:504845478-504845490:+ does not have available information here.