Microexon ID Hv_2H:504845478-504845490:+
Species Hordeum   Vulgare
Coordinates 2H:504845478..504845490
Microexon Cluster ID MEP33
Size 13
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 47,13,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GAVTTYYTRTCARTHTCRGARTTYCTWGTKGARRTWTCTGATGAYYTGTWTGAYTAYGAGGATGAYGTKTTRRAGAAYAAYTTCAAYATTYTGCGCATGTTTGTYRRA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATGATTATGAG
Microexon Amino Acid seq LYDYE
Microexon-tag DNA Seq GATTTCTTGTCTGTCTCAGAATTTTTAGTTGAGATATGTGATGACCTGTATGATTATGAGGACGATGTGGTTAACAATACTTTTAACATCCTCCGCATGTTTGCTGCG
Microexon-tag Amino Acid Seq DFLSVSEFLVEICDDLYDYEDDVVNNTFNILRMFAA
Microexon-tag spanning region504845034-504845626
Microexon-tag prediction score0.9199
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.2HG0172360.1x
Reference Transcript ID HORVU.MOREX.r3.2HG0172360.1
Gene ID HORVU.MOREX.r3.2HG0172360
Gene Name NA
Transcript ID HORVU.MOREX.r3.2HG0172360.1
Protein ID
Gene ID HORVU.MOREX.r3.2HG0172360
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >HORVU.MOREX.r3.2HG0172360.1
MEALLELEKVQRVLSLMGSRGLSDSNGSGGGDRFLAHFLLFLAQPFDSLAIEKKVILISELLKEVNSDTLKEVQRLASLD
GTNREDEPTKQFKMDAEKLIIHDAPMIGFDAMMRANSIQDAPMIGFDAMMRANSIQDAPMIGFDAMMRANSTLEDFCRSY
FIFHGLDVNRPHSVFKFLPFLSFTESYIYQLDASNEDSLQLVPDNNASSTVLQRKIQGSSQTSLSDMLDPLDNLLQCQGL
MTDQLRNELKSGIQYWSLERKLCQALSRSDKISIEDVMEAIHLKSFDYRVLNLIMYQLTGQKVNDLHMDFLSVSEFLVEI
CDDLYDYEDDVVNNTFNILRMFAAIYGPLDAPKMLAKCIGEAEEKYESFSKKLDPNISRSYWRRCEEATKEGGEISGHTY
GTWNIPPLIRDEESFRLDRSSRGDASAMAIR*
CDS seq >HORVU.MOREX.r3.2HG0172360.1
ATGGAGGCGCTGCTGGAGCTAGAAAAGGTGCAGAGGGTGCTCTCGCTCATGGGCTCCCGTGGCCTCTCCGATTCCAACGG
CAGCGGCGGCGGGGACCGCTTCCTCGCCCACTTCCTCCTCTTCCTGGCGCAACCGTTTGATTCACTTGCCATTGAGAAGA
AGGTCATATTAATCTCTGAGCTTTTGAAAGAGGTTAATTCTGATACTCTCAAAGAAGTTCAACGTCTAGCCAGTCTGGAC
GGTACTAATAGGGAAGATGAACCAACTAAGCAGTTCAAGATGGATGCTGAGAAATTAATCATTCATGATGCACCTATGAT
TGGATTCGATGCAATGATGAGAGCCAATTCCATCCAGGATGCACCTATGATTGGATTCGATGCAATGATGAGAGCCAATT
CCATTCAGGATGCACCTATGATTGGATTCGATGCAATGATGAGAGCCAATTCCACGCTTGAAGATTTTTGCAGGTCATAC
TTCATATTTCATGGTTTGGATGTTAACAGACCACACTCTGTTTTCAAGTTTCTTCCTTTTCTTTCTTTTACAGAGAGCTA
CATATACCAGTTAGATGCTTCAAATGAAGACAGTTTGCAATTAGTTCCAGACAACAACGCTTCTTCAACAGTATTGCAAA
GGAAAATACAAGGTTCTAGTCAGACGTCCTTGTCTGACATGCTTGATCCCCTTGATAATCTTCTTCAGTGCCAGGGGTTA
ATGACAGATCAATTGCGAAATGAACTCAAATCTGGCATCCAGTATTGGTCTCTAGAGAGGAAGCTTTGTCAAGCATTATC
AAGAAGTGATAAGATATCTATCGAAGATGTTATGGAAGCAATCCATCTCAAATCATTTGACTATCGAGTCCTTAATCTGA
TTATGTATCAGCTTACTGGTCAGAAGGTCAATGACTTGCATATGGATTTCTTGTCTGTCTCAGAATTTTTAGTTGAGATA
TGTGATGACCTGTATGATTATGAGGACGATGTGGTTAACAATACTTTTAACATCCTCCGCATGTTTGCTGCGATATATGG
ACCTTTAGATGCACCAAAGATGCTGGCCAAGTGCATTGGTGAAGCTGAGGAAAAATATGAGAGCTTCTCAAAGAAATTGG
ACCCTAACATTTCAAGAAGTTACTGGAGAAGATGTGAGGAGGCTACAAAGGAAGGTGGAGAAATATCAGGCCATACGTAT
GGCACATGGAATATCCCTCCTCTGATAAGAGATGAAGAATCATTTCGCCTTGATAGATCGAGCAGAGGTGATGCTTCTGC
CATGGCCATAAGATGA
Hv_2H:504845478-504845490:+ does not have available information here.