Microexon ID Zm_8:119168520-119168532:+
Species Zea mays
Coordinates 8:119168520..119168532
Microexon Cluster ID MEP32
Size 13
Phase 0
Pfam Domain Motif MCM6_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAATTGGTTGAAG
Microexon Amino Acid seq ELVED
Microexon-tag DNA Seq ACAATTAATGTTTTAGATGTCATTTCCAACTTCCCTGACATATCAATGGAATTGGTTGAAGATATTATGGAGAGGCTACATAAAGATAGTATACTATCAAGGGCAAGC
Microexon-tag Amino Acid Seq TINVLDVISNFPDISMELVEDIMERLHKDSILSRAS
Microexon-tag spanning region119168355-119168891
Microexon-tag prediction score0.9225
Overlapped with the annotated transcript (%) 56.48
New Transcript ID Zm00001d010524_T001x
Reference Transcript ID Zm00001d010524_T001
Gene ID Zm00001d010524
Gene Name NA
Transcript ID Zm00001d010524_T001
Protein ID Zm00001d010524_P001
Gene ID Zm00001d010524
Gene Name NA
Pfam domain motif ssDBP_DBD
Motif E-value 0.074
Motif start 50
Motif end 88
Protein seq >Zm00001d010524_P001
MSTDVLRPTFYWINGVVYAIQMIFKNSAHEEELTSQVKGWIRSWDNETINVLDVISNFPDISMELVEGLRKWFLSLCMMI
TSLRREDYMKKKHGILSAGGFY*
CDS seq >Zm00001d010524_T001
ATGTCGACTGATGTGCTTAGACCAACTTTCTATTGGATCAACGGTGTGGTTTATGCAATTCAGATGATATTCAAAAATAG
TGCTCACGAGGAAGAGCTAACTTCCCAAGTGAAAGGGTGGATACGCTCATGGGACAACGAAACAATTAATGTTTTAGATG
TCATTTCCAACTTCCCTGACATATCAATGGAATTGGTTGAAGGTCTAAGAAAATGGTTCTTGTCATTGTGCATGATGATT
ACATCCTTGAGAAGGGAAGACTACATGAAGAAGAAGCATGGTATTCTTTCAGCAGGTGGTTTCTATTGA
Zm_8:119168520-119168532:+ does not have available information here.