
Microexon ID | Zm_8:119168520-119168532:+ |
Species | Zea mays | Coordinates | 8:119168520..119168532 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAATTGGTTGAAG |
Microexon Amino Acid seq | ELVED |
Microexon-tag DNA Seq | ACAATTAATGTTTTAGATGTCATTTCCAACTTCCCTGACATATCAATGGAATTGGTTGAAGATATTATGGAGAGGCTACATAAAGATAGTATACTATCAAGGGCAAGC |
Microexon-tag Amino Acid Seq | TINVLDVISNFPDISMELVEDIMERLHKDSILSRAS |
Microexon-tag spanning region | 119168355-119168891 |
Microexon-tag prediction score | 0.9225 |
Overlapped with the annotated transcript (%) | 56.48 |
New Transcript ID | Zm00001d010524_T001x |
Reference Transcript ID | Zm00001d010524_T001 |
Gene ID | Zm00001d010524 |
Gene Name | NA |
Transcript ID | Zm00001d010524_T001 |
Protein ID | Zm00001d010524_P001 |
Gene ID | Zm00001d010524 |
Gene Name | NA |
Pfam domain motif | ssDBP_DBD |
Motif E-value | 0.074 |
Motif start | 50 |
Motif end | 88 |
Protein seq | >Zm00001d010524_P001 MSTDVLRPTFYWINGVVYAIQMIFKNSAHEEELTSQVKGWIRSWDNETINVLDVISNFPDISMELVEGLRKWFLSLCMMI TSLRREDYMKKKHGILSAGGFY* |
CDS seq | >Zm00001d010524_T001 ATGTCGACTGATGTGCTTAGACCAACTTTCTATTGGATCAACGGTGTGGTTTATGCAATTCAGATGATATTCAAAAATAG TGCTCACGAGGAAGAGCTAACTTCCCAAGTGAAAGGGTGGATACGCTCATGGGACAACGAAACAATTAATGTTTTAGATG TCATTTCCAACTTCCCTGACATATCAATGGAATTGGTTGAAGGTCTAAGAAAATGGTTCTTGTCATTGTGCATGATGATT ACATCCTTGAGAAGGGAAGACTACATGAAGAAGAAGCATGGTATTCTTTCAGCAGGTGGTTTCTATTGA |
Zm_8:119168520-119168532:+ does not have available information here.