
Microexon ID | Zm_2:197850277-197850289:+ |
Species | Zea mays | Coordinates | 2:197850277..197850289 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAATTGGTTGAAG |
Microexon Amino Acid seq | ELVED |
Microexon-tag DNA Seq | ACAATTAATGTTTCAGATGTCCTTTCTAACTTCCCTGACATATCAATGGAATTGGTTGAAGATATAATGGACAGGCTACTTAAAGATGGTATACTATCCAGGGCAAGC |
Microexon-tag Amino Acid Seq | TINVSDVLSNFPDISMELVEDIMDRLLKDGILSRAS |
Microexon-tag spanning region | 197850118-197850430 |
Microexon-tag prediction score | 0.9434 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d006089_T001x |
Reference Transcript ID | Zm00001d006089_T001 |
Gene ID | Zm00001d006089 |
Gene Name | NA |
Transcript ID | Zm00001d006089_T001 |
Protein ID | Zm00001d006089_P001 |
Gene ID | Zm00001d006089 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d006089_P001 MIRTLVSLMRTLDPMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAISIWNKNPLKMEVGNVNSKHLVLALKVKSVL DPCDDDNVNSEGDGMTVDNESDHDDDFSDTEVHPPKADHYIIAPNEGKDKDQDTGTISEDDTQDTAHEEELTSQVKEWIC SRDSGTINVSDVLSNFPDISMELVEDIMDRLLKDGILSRASKDGYTVNQKADPKTPHIKKEAIMPDVSPTNVTKHNNGDL LYMKALYHALPMDYVTIAKLQGKLDGEASQNTVRKLIDKMVQDGYVKNSANRRLGKAVIHSESTNKRLLEIKKILEVNEG EKMAIDTNTEHPEPEHKDLLRVYEVGDGSTMGCLHSIGSDLTRTRELPELQQNVSMQSGQEASTVGKDSSRTPTSVRELA VPVCSLESGVLGKRIKRSLTGGNEMQSTQDKRSRKASMVKEAILQHVKCQNPQAQ* |
CDS seq | >Zm00001d006089_T001 ATGATCAGAACGCTGGTTTCACTTATGAGAACCTTGGACCCAATGCCTGAGGAGCGAACCATTCTAATGAAGCTTCTATA CTATGATGATGTCACACCCGAGGATTATGAGCCTCCTTTCTTCAAGTGTTGTGCTGATAATGAGGCCATAAGTATATGGA ACAAGAACCCCTTGAAGATGGAAGTGGGCAATGTCAATAGCAAGCACCTTGTGTTAGCTTTGAAGGTCAAGAGTGTCCTT GATCCATGCGATGATGACAATGTTAACAGCGAAGGTGATGGCATGACTGTGGATAATGAGTCTGATCATGATGATGACTT TTCTGACACTGAGGTTCATCCACCAAAGGCGGATCATTACATCATAGCTCCTAATGAAGGAAAAGACAAAGATCAGGACA CTGGTACTATTTCAGAAGATGATACTCAAGATACTGCTCATGAGGAAGAGCTAACTTCCCAAGTGAAGGAGTGGATATGC TCAAGGGACAGCGGAACAATTAATGTTTCAGATGTCCTTTCTAACTTCCCTGACATATCAATGGAATTGGTTGAAGATAT AATGGACAGGCTACTTAAAGATGGTATACTATCCAGGGCAAGCAAAGATGGTTATACGGTTAACCAGAAGGCTGATCCAA AAACACCACATATAAAGAAGGAGGCCATCATGCCAGATGTATCACCAACTAATGTAACCAAACACAACAATGGGGATCTG CTATATATGAAGGCATTATATCATGCACTTCCCATGGATTATGTGACAATAGCCAAACTTCAAGGAAAGCTGGATGGGGA AGCCAGCCAAAATACAGTCCGAAAGTTGATTGACAAGATGGTGCAAGATGGATATGTGAAGAATTCAGCCAACCGAAGAC TGGGCAAAGCTGTCATTCATTCTGAATCTACCAACAAAAGGCTCCTTGAGATAAAAAAGATACTGGAAGTCAATGAAGGC GAAAAGATGGCCATTGACACCAATACAGAGCATCCTGAGCCTGAGCACAAAGACCTTCTGAGAGTCTATGAAGTGGGAGA TGGCTCCACTATGGGTTGCCTCCACTCAATTGGATCTGATCTTACTCGTACTCGGGAGCTGCCAGAGCTGCAACAGAATG TGTCCATGCAGAGCGGGCAAGAAGCTTCCACAGTGGGTAAGGATTCCAGCAGGACTCCAACAAGTGTGCGTGAGCTGGCT GTACCTGTTTGTTCCCTGGAAAGTGGAGTGCTTGGAAAGAGAATCAAAAGGTCTCTAACTGGTGGAAATGAGATGCAGTC TACCCAGGACAAGCGATCCAGGAAGGCTAGCATGGTGAAGGAAGCAATACTCCAACATGTCAAGTGCCAAAACCCTCAGG CTCAGTGA |
Microexon DNA seq | GAATTGGTTGAAG |
Microexon Amino Acid seq | ELVED |
Microexon-tag DNA Seq | ACAATTAATGTTTCAGATGTCCTTTCTAACTTCCCTGACATATCAATGGAATTGGTTGAAGATATAATGGACAGGCTACTTAAAGATGGTATACTATCCAGGGCAAGC |
Microexon-tag Amino Acid seq | TINVSDVLSNFPDISMELVEDIMDRLLKDGILSRAS |
Transcript ID | Zm.11801.1 |
Gene ID | Zm.11801 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.11801.1 MAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFHEKYFSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQ KKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSTEEVAMNMSRTGSKKGSTTFTSNASEVTPDQMRSSACKMIRTLVSLM RTLDPMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAISIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDDNVN SEGDGMTVDNESDHDDDFSDTEVHPPKADHYIIAPNEGKDKDQDTGTISEDDTQDTAHEEELTSQVKEWICSRDSGTINV SDVLSNFPDISMELVEDIMDRLLKDGILSRASKDGYTVNQKADPKTPHIKKEAIMPDVSPTNVTKHNNGDLLYMKALYHA LPMDYVTIAKLQGKLDGEASQNTVRKLIDKMVQDGYVKNSANRRLGKAVIHSESTNKRLLEIKKILEVNEGEKMAIDTNT EHPEPEHKDLLRVYEVGDGSTMGCLHSIGSDLTRTRELPELQQNVSMQSGQEASTVGKDSSRTPTSVRELAVPVCSLESG VLGKRIKRSLTGGNEMQSTQDKRSRKASMVKEAILQHVKCQNPQAQ* |
CDS seq | >Zm.11801.1 ATGGCTCAGAAGACGAAGGAGGCGGAGATCACCGAGCAGGATTCGCTGCTTCTAACAAGGAATTTGCTCCGGATTGCCAT ATACAACATCAGCTACATCAGAGGCCTATTCCATGAGAAGTACTTCAGTGATAAGTCGGTTCCAGCACTAGAGATGAAGA TTAAGAAGCTGATGCCAATGGATGCTGAGTCAAGGAGACTAATTGATTGGATGGAGAAAGGTGTCTATGATGCTTTGCAA AAGAAATATCTCAAGACCCTCCTCTTCTGTATCTGCGAGAAGGAGGAGGGCCCAATGATTGAGGAGTATGCCTTCTCATT TAGCTACCCCAACACCAGTACCGAGGAAGTTGCGATGAACATGAGCCGTACGGGGAGCAAAAAGGGCAGTACTACATTCA CTTCAAATGCTTCAGAAGTAACTCCTGATCAGATGAGAAGCTCTGCTTGTAAGATGATCAGAACGCTGGTTTCACTTATG AGAACCTTGGACCCAATGCCTGAGGAGCGAACCATTCTAATGAAGCTTCTATACTATGATGATGTCACACCCGAGGATTA TGAGCCTCCTTTCTTCAAGTGTTGTGCTGATAATGAGGCCATAAGTATATGGAACAAGAACCCCTTGAAGATGGAAGTGG GCAATGTCAATAGCAAGCACCTTGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGATCCATGCGATGATGACAATGTTAAC AGCGAAGGTGATGGCATGACTGTGGATAATGAGTCTGATCATGATGATGACTTTTCTGACACTGAGGTTCATCCACCAAA GGCGGATCATTACATCATAGCTCCTAATGAAGGAAAAGACAAAGATCAGGACACTGGTACTATTTCAGAAGATGATACTC AAGATACTGCTCATGAGGAAGAGCTAACTTCCCAAGTGAAGGAGTGGATATGCTCAAGGGACAGCGGAACAATTAATGTT TCAGATGTCCTTTCTAACTTCCCTGACATATCAATGGAATTGGTTGAAGATATAATGGACAGGCTACTTAAAGATGGTAT ACTATCCAGGGCAAGCAAAGATGGTTATACGGTTAACCAGAAGGCTGATCCAAAAACACCACATATAAAGAAGGAGGCCA TCATGCCAGATGTATCACCAACTAATGTAACCAAACACAACAATGGGGATCTGCTATATATGAAGGCATTATATCATGCA CTTCCCATGGATTATGTGACAATAGCCAAACTTCAAGGAAAGCTGGATGGGGAAGCCAGCCAAAATACAGTCCGAAAGTT GATTGACAAGATGGTGCAAGATGGATATGTGAAGAATTCAGCCAACCGAAGACTGGGCAAAGCTGTCATTCATTCTGAAT CTACCAACAAAAGGCTCCTTGAGATAAAAAAGATACTGGAAGTCAATGAAGGCGAAAAGATGGCCATTGACACCAATACA GAGCATCCTGAGCCTGAGCACAAAGACCTTCTGAGAGTCTATGAAGTGGGAGATGGCTCCACTATGGGTTGCCTCCACTC AATTGGATCTGATCTTACTCGTACTCGGGAGCTGCCAGAGCTGCAACAGAATGTGTCCATGCAGAGCGGGCAAGAAGCTT CCACAGTGGGTAAGGATTCCAGCAGGACTCCAACAAGTGTGCGTGAGCTGGCTGTACCTGTTTGTTCCCTGGAAAGTGGA GTGCTTGGAAAGAGAATCAAAAGGTCTCTAACTGGTGGAAATGAGATGCAGTCTACCCAGGACAAGCGATCCAGGAAGGC TAGCATGGTGAAGGAAGCAATACTCCAACATGTCAAGTGCCAAAACCCTCAGGCTCAGTGA |