
Microexon ID | Vv_1:20937952-20937964:+ |
Species | Vistis vinifera | Coordinates | 1:20937952..20937964 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTTGACTGAAG |
Microexon Amino Acid seq | VLTEE |
Microexon-tag DNA Seq | ACCATTGAACTCACAGATGTTCTGTCAAATTTTCCCGACATCTCAGTGGTTTTGACTGAAGAAATTATGGACAAGCTTGTTAAAGAAGGTGTTCTATCAAAAACTGGA |
Microexon-tag Amino Acid Seq | TIELTDVLSNFPDISVVLTEEIMDKLVKEGVLSKTG |
Microexon-tag spanning region | 20937515-20938128 |
Microexon-tag prediction score | 0.9566 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_01s0010g03590.t01x |
Reference Transcript ID | VIT_01s0010g03590.t01 |
Gene ID | VIT_01s0010g03590 |
Gene Name | NA |
Transcript ID | VIT_01s0010g03590.t01 |
Protein ID | VIT_01s0010g03590.t01 |
Gene ID | VIT_01s0010g03590 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_01s0010g03590.t01 MFCVCEAIEGPMIEEYAFSFSYSNSDSQEVSMNVNRTGTKKGGTFKCNSATEVTPNQMRSSACKMVRTLVQLMRTLDRMP EERTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCEDENEDIQNDDVS LGADSVQRDEYSESDSEVNLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDVLS NFPDISVVLTEEIMDKLVKEGVLSKTGKDAYTIKRQKECEYEFDAVKEEMGAQALPINDKVDQAMGEDHMYMKALYYALP MNYVTVPKLQNMLQGQANQTTVRKLIDRMTQDGFIDAKSNRRLGKRVIHSDLTEKKLIEVTKSLNNEAMDLDVSEPHDNS NHLGFHTNGSNLKDMSTCGVLHSIGSDLTRMRGRSDVYQNGSIRSEQTISKTLGQGNTPTSRVEPIASRESFAPGSDNTR ANGNTNYGDEVDAIICSRSTQDKRSRKASTVKEPILQYLKRRKAQAI* |
CDS seq | >VIT_01s0010g03590.t01 ATGTTCTGTGTGTGTGAAGCAATAGAAGGCCCGATGATTGAAGAATATGCATTTTCTTTCAGTTATTCAAATTCTGATAG TCAAGAGGTTTCAATGAATGTCAATCGCACTGGAACCAAGAAGGGAGGAACATTCAAGTGTAACTCCGCAACTGAAGTTA CTCCCAATCAGATGAGGAGCTCTGCTTGTAAAATGGTCCGTACGCTGGTGCAATTGATGAGAACTCTAGATAGGATGCCA GAAGAGCGCACTATACTGATGAAACTCCTCTACTATGATGATGTGACGCCAGTGGACTATGAACCTCCTTTCTTTAGGAG CTGCACTGAAGAAGAAGCTCATATCTCATGGAACAAGAATCCTTTGAAAATGGAGGTTGGGAATGTGAACAGCAAACATC TCGTATTAGCTCTCAAGGTAAAGAGTGTGCTTGATCCTTGTGAGGATGAAAACGAAGATATCCAAAATGATGATGTGAGT TTGGGAGCTGATTCTGTACAAAGAGATGAGTATTCTGAATCTGACAGTGAGGTTAACCTTTCGCAAAGGGACCAATATAT TGTTGCACCAGTAGATAAGCAGAAGCCACCTGAAGACACTGGTATGGTTGATGAAGATGATACCCAGGATTCGGTGGAAG ATGAACAACAATTGAGCCGGGTGAAGGATTGGATCAGCTGTTGCCACCTTGACACCATTGAACTCACAGATGTTCTGTCA AATTTTCCCGACATCTCAGTGGTTTTGACTGAAGAAATTATGGACAAGCTTGTTAAAGAAGGTGTTCTATCAAAAACTGG AAAGGACGCTTACACCATCAAGAGGCAGAAGGAATGTGAGTATGAATTTGATGCTGTGAAAGAAGAAATGGGTGCTCAAG CACTTCCTATTAATGATAAAGTTGACCAGGCTATGGGAGAGGATCACATGTACATGAAGGCTTTGTACTATGCTCTTCCG ATGAACTATGTGACAGTTCCTAAGCTTCAAAACATGCTCCAAGGACAAGCCAATCAGACTACTGTGCGCAAACTAATTGA TAGAATGACCCAAGATGGATTTATTGATGCTAAAAGCAACCGAAGGCTAGGAAAGCGCGTGATCCATTCTGATCTGACTG AGAAAAAGCTAATTGAAGTCACAAAATCCTTGAACAATGAAGCTATGGATTTGGATGTCAGTGAGCCACATGACAACTCC AACCATCTAGGATTTCACACAAACGGAAGCAACCTCAAGGACATGTCCACATGCGGTGTCCTCCACTCCATTGGATCAGA TCTCACGCGAATGAGAGGCAGATCAGACGTATATCAAAATGGCTCAATTAGGAGCGAGCAGACCATTTCAAAGACACTGG GGCAGGGGAACACTCCCACGAGCAGGGTTGAGCCAATAGCTTCAAGAGAGAGCTTTGCACCAGGGAGTGACAACACCAGA GCAAATGGAAATACAAATTACGGTGATGAGGTGGATGCCATTATCTGTAGTAGGTCCACCCAAGACAAGAGATCCAGGAA AGCAAGCACGGTGAAGGAGCCTATCCTTCAATACCTGAAGCGCCGGAAAGCTCAAGCTATCTGA |
Microexon DNA seq | GTTTTGACTGAAG |
Microexon Amino Acid seq | VLTEE |
Microexon-tag DNA Seq | ACCATTGAACTCACAGATGTTCTGTCAAATTTTCCCGACATCTCAGTGGTTTTGACTGAAGAAATTATGGACAAGCTTGTTAAAGAAGGTGTTCTATCAAAAACTGGA |
Microexon-tag Amino Acid seq | TIELTDVLSNFPDISVVLTEEIMDKLVKEGVLSKTG |
Transcript ID | Vv.1619.2 |
Gene ID | Vv.1619 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.1619.2 MVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDA LQKKYLKTLMFCVCEAIEGPMIEEYAFSFSYSNSDSQEVSMNVNRTGTKKGGTFKCNSATEVTPNQMRSSACKMVRTLVQ LMRTLDRMPEERTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCEDEN EDIQNDDVSLGADSVQRDEYSESDSEVNLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLD TIELTDVLSNFPDISVVLTEEIMDKLVKEGVLSKTGKDAYTIKRQKECEYEFDAVKEEMGAQALPINDKVDQAMGEDHMY MKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRMTQDGFIDAKSNRRLGKRVIHSDLTEKKLIEVTKSLNNEAMDL DVSEPHDNSNHLGFHTNGSNLKDMSTCGVLHSIGSDLTRMRGRSDVYQNGSIRSEQTISKTLGQGNTPTSRVEPIASRES FAPGSDNTRANGNTNYGDEVDAIICSRSTQDKRSRKASTVKEPILQYLKRRKAQAI* |
CDS seq | >Vv.1619.2 ATGGTTGTTGCACAGAAATTGAAGGAAGCAGAGATCACTGAGCAGGATTCTCTTCTTCTGACAAGGAACCTTCTCCGTAT TGCCATATTCAATATTAGTTACATCAGAGGACTTTTTCCAGAAAAATATTTCAATGATAAGTCAGTTCCAGCCTTAGAGA TGAAGATCAAGAAGCTTATGCCAATGGATGCAGAGTCACGCAGGCTGATTGATTGGATGGAAAAAGGTGTTTATGATGCA TTGCAAAAGAAATACCTGAAAACGCTTATGTTCTGTGTGTGTGAAGCAATAGAAGGCCCGATGATTGAAGAATATGCATT TTCTTTCAGTTATTCAAATTCTGATAGTCAAGAGGTTTCAATGAATGTCAATCGCACTGGAACCAAGAAGGGAGGAACAT TCAAGTGTAACTCCGCAACTGAAGTTACTCCCAATCAGATGAGGAGCTCTGCTTGTAAAATGGTCCGTACGCTGGTGCAA TTGATGAGAACTCTAGATAGGATGCCAGAAGAGCGCACTATACTGATGAAACTCCTCTACTATGATGATGTGACGCCAGT GGACTATGAACCTCCTTTCTTTAGGAGCTGCACTGAAGAAGAAGCTCATATCTCATGGAACAAGAATCCTTTGAAAATGG AGGTTGGGAATGTGAACAGCAAACATCTCGTATTAGCTCTCAAGGTAAAGAGTGTGCTTGATCCTTGTGAGGATGAAAAC GAAGATATCCAAAATGATGATGTGAGTTTGGGAGCTGATTCTGTACAAAGAGATGAGTATTCTGAATCTGACAGTGAGGT TAACCTTTCGCAAAGGGACCAATATATTGTTGCACCAGTAGATAAGCAGAAGCCACCTGAAGACACTGGTATGGTTGATG AAGATGATACCCAGGATTCGGTGGAAGATGAACAACAATTGAGCCGGGTGAAGGATTGGATCAGCTGTTGCCACCTTGAC ACCATTGAACTCACAGATGTTCTGTCAAATTTTCCCGACATCTCAGTGGTTTTGACTGAAGAAATTATGGACAAGCTTGT TAAAGAAGGTGTTCTATCAAAAACTGGAAAGGACGCTTACACCATCAAGAGGCAGAAGGAATGTGAGTATGAATTTGATG CTGTGAAAGAAGAAATGGGTGCTCAAGCACTTCCTATTAATGATAAAGTTGACCAGGCTATGGGAGAGGATCACATGTAC ATGAAGGCTTTGTACTATGCTCTTCCGATGAACTATGTGACAGTTCCTAAGCTTCAAAACATGCTCCAAGGACAAGCCAA TCAGACTACTGTGCGCAAACTAATTGATAGAATGACCCAAGATGGATTTATTGATGCTAAAAGCAACCGAAGGCTAGGAA AGCGCGTGATCCATTCTGATCTGACTGAGAAAAAGCTAATTGAAGTCACAAAATCCTTGAACAATGAAGCTATGGATTTG GATGTCAGTGAGCCACATGACAACTCCAACCATCTAGGATTTCACACAAACGGAAGCAACCTCAAGGACATGTCCACATG CGGTGTCCTCCACTCCATTGGATCAGATCTCACGCGAATGAGAGGCAGATCAGACGTATATCAAAATGGCTCAATTAGGA GCGAGCAGACCATTTCAAAGACACTGGGGCAGGGGAACACTCCCACGAGCAGGGTTGAGCCAATAGCTTCAAGAGAGAGC TTTGCACCAGGGAGTGACAACACCAGAGCAAATGGAAATACAAATTACGGTGATGAGGTGGATGCCATTATCTGTAGTAG GTCCACCCAAGACAAGAGATCCAGGAAAGCAAGCACGGTGAAGGAGCCTATCCTTCAATACCTGAAGCGCCGGAAAGCTC AAGCTATCTGA |