
Microexon ID | Ta_5B:471303294-471303306:+ |
Species | Triticum Aestivum | Coordinates | 5B:471303294..471303306 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATGGTGGAAG |
Microexon Amino Acid seq | EMVED |
Microexon-tag DNA Seq | ACTGTTAATGCTTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATGGTTTACTTTCCAGGGCAGGC |
Microexon-tag Amino Acid Seq | TVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAG |
Microexon-tag spanning region | 471303041-471303465 |
Microexon-tag prediction score | 0.9341 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G285800.1x |
Reference Transcript ID | TraesCS5B02G285800.1 |
Gene ID | TraesCS5B02G285800 |
Gene Name | NA |
Transcript ID | TraesCS5B02G285800.1 |
Protein ID | |
Gene ID | TraesCS5B02G285800 |
Gene Name | |
Pfam domain motif | RQC |
Motif E-value | 0.6 |
Motif start | 278 |
Motif end | 327 |
Protein seq | >TraesCS5B02G285800.1 MKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTNGEEVAMNMSRTGSKKNSA TFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDATPEDYEPPFFKGCAENEAVNIWNKNPLKM EVGNVNSKHLVLALKVKSVLDPCDANDANSDDDKMSLGRESDQDNDLSDTEVRPSEVDRYVVAPNDGNCKGQSGTNSEDE TQDAAHEEELTAQVRAWICSRDMGTVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAGKDGYAVNKVTDPKTPYIKKE KEVAMHNVTPTEGTKNNDTDVMYMKALYHALPMDYVTVAKLQGKLDGEANQTTVRKLMDKMVQDGYIKNSGNRRLGKAVI HSEVTNRKLLEIKKILEVDISDEMAIDTNARPAEFDRRDHQITDQEMKDGSTNGRFQSVGSDLTRTRELPEQQQNNKDPS RTPTSNRESATSLESGVLGQRIRKSLAGEESMGTPDKRTRKTSMVKEPILQQVKRQKS* |
CDS seq | >TraesCS5B02G285800.1 ATGAAGATTAAGAAGCTGATGCCCATGGATGCTGAATCCAGGAGGTTGATTGATTGGATGGAGAAAGGTGTCTATGATGC CTTACAAAAGAAATATCTCAAGACCCTTCTCTTCTGTATATGTGAGAAGGAGGAAGGCCCCATGATTGAAGAGTATGCCT TCTCATTTAGCTACCCCAACACAAACGGGGAAGAAGTTGCAATGAACATGAGTCGCACAGGGAGCAAAAAGAATAGTGCC ACATTCAAGTCAAATGCAGCAGAAGTCACTCCTGACCAGATGAGGAGCTCTGCTTGTAAGATGATCAGAACGCTGGTTTC ACTTATGAGGACCTTGGATCAAATGCCAGAGGAGCGAACCATTCTGATGAAGCTGCTATACTATGATGATGCCACACCTG AGGATTACGAGCCTCCCTTCTTTAAGGGTTGTGCTGAGAATGAAGCCGTAAATATATGGAACAAGAACCCCTTGAAGATG GAAGTGGGGAATGTCAATAGCAAGCATCTTGTGTTAGCTTTGAAGGTTAAGAGTGTCCTTGATCCATGTGATGCTAATGA TGCTAACAGTGATGATGACAAGATGAGCTTGGGTCGTGAGTCAGACCAAGATAATGATTTATCGGACACCGAGGTTCGCC CATCTGAAGTGGATCGTTACGTCGTTGCTCCTAATGATGGAAATTGCAAAGGTCAGAGTGGTACAAACTCAGAAGATGAA ACTCAAGATGCTGCTCATGAGGAAGAGCTAACAGCTCAAGTAAGAGCATGGATATGCTCAAGAGACATGGGTACTGTTAA TGCTTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATG GTTTACTTTCCAGGGCAGGCAAGGATGGTTATGCTGTTAACAAGGTTACTGATCCCAAAACACCCTACATAAAGAAAGAG AAAGAGGTTGCCATGCACAATGTTACACCTACTGAAGGAACCAAAAACAACGACACAGATGTGATGTACATGAAGGCATT ATACCACGCACTTCCAATGGATTATGTGACTGTAGCTAAGCTTCAGGGCAAGCTTGATGGCGAAGCCAACCAGACCACAG TCCGAAAGTTGATGGACAAAATGGTGCAAGATGGATACATTAAGAATTCAGGCAACAGAAGATTAGGAAAAGCTGTCATT CATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATACTGGAAGTTGATATCAGTGATGAAATGGCAATTGA CACCAACGCAAGGCCTGCTGAGTTTGACCGCAGAGATCATCAGATAACTGACCAGGAAATGAAAGATGGCTCGACAAACG GCCGCTTCCAGTCAGTTGGATCTGATCTTACCCGCACACGGGAGCTACCGGAGCAGCAGCAGAATAACAAGGACCCAAGC AGGACTCCCACAAGCAATCGCGAGTCGGCTACGTCCCTGGAGAGTGGGGTGCTCGGGCAGAGGATCAGGAAGTCTCTGGC TGGCGAAGAGTCGATGGGCACGCCGGACAAGCGGACCAGGAAGACCAGCATGGTGAAGGAGCCGATCCTCCAGCAGGTCA AGCGCCAGAAGTCCTAG |
Ta_5B:471303294-471303306:+ does not have available information here.