Microexon ID Ta_5B:471303294-471303306:+
Species Triticum   Aestivum
Coordinates 5B:471303294..471303306
Microexon Cluster ID MEP32
Size 13
Phase 0
Pfam Domain Motif MCM6_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAATGGTGGAAG
Microexon Amino Acid seq EMVED
Microexon-tag DNA Seq ACTGTTAATGCTTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATGGTTTACTTTCCAGGGCAGGC
Microexon-tag Amino Acid Seq TVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAG
Microexon-tag spanning region471303041-471303465
Microexon-tag prediction score0.9341
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G285800.1x
Reference Transcript ID TraesCS5B02G285800.1
Gene ID TraesCS5B02G285800
Gene Name NA
Transcript ID TraesCS5B02G285800.1
Protein ID
Gene ID TraesCS5B02G285800
Gene Name
Pfam domain motif RQC
Motif E-value 0.6
Motif start 278
Motif end 327
Protein seq >TraesCS5B02G285800.1
MKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTNGEEVAMNMSRTGSKKNSA
TFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDATPEDYEPPFFKGCAENEAVNIWNKNPLKM
EVGNVNSKHLVLALKVKSVLDPCDANDANSDDDKMSLGRESDQDNDLSDTEVRPSEVDRYVVAPNDGNCKGQSGTNSEDE
TQDAAHEEELTAQVRAWICSRDMGTVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAGKDGYAVNKVTDPKTPYIKKE
KEVAMHNVTPTEGTKNNDTDVMYMKALYHALPMDYVTVAKLQGKLDGEANQTTVRKLMDKMVQDGYIKNSGNRRLGKAVI
HSEVTNRKLLEIKKILEVDISDEMAIDTNARPAEFDRRDHQITDQEMKDGSTNGRFQSVGSDLTRTRELPEQQQNNKDPS
RTPTSNRESATSLESGVLGQRIRKSLAGEESMGTPDKRTRKTSMVKEPILQQVKRQKS*
CDS seq >TraesCS5B02G285800.1
ATGAAGATTAAGAAGCTGATGCCCATGGATGCTGAATCCAGGAGGTTGATTGATTGGATGGAGAAAGGTGTCTATGATGC
CTTACAAAAGAAATATCTCAAGACCCTTCTCTTCTGTATATGTGAGAAGGAGGAAGGCCCCATGATTGAAGAGTATGCCT
TCTCATTTAGCTACCCCAACACAAACGGGGAAGAAGTTGCAATGAACATGAGTCGCACAGGGAGCAAAAAGAATAGTGCC
ACATTCAAGTCAAATGCAGCAGAAGTCACTCCTGACCAGATGAGGAGCTCTGCTTGTAAGATGATCAGAACGCTGGTTTC
ACTTATGAGGACCTTGGATCAAATGCCAGAGGAGCGAACCATTCTGATGAAGCTGCTATACTATGATGATGCCACACCTG
AGGATTACGAGCCTCCCTTCTTTAAGGGTTGTGCTGAGAATGAAGCCGTAAATATATGGAACAAGAACCCCTTGAAGATG
GAAGTGGGGAATGTCAATAGCAAGCATCTTGTGTTAGCTTTGAAGGTTAAGAGTGTCCTTGATCCATGTGATGCTAATGA
TGCTAACAGTGATGATGACAAGATGAGCTTGGGTCGTGAGTCAGACCAAGATAATGATTTATCGGACACCGAGGTTCGCC
CATCTGAAGTGGATCGTTACGTCGTTGCTCCTAATGATGGAAATTGCAAAGGTCAGAGTGGTACAAACTCAGAAGATGAA
ACTCAAGATGCTGCTCATGAGGAAGAGCTAACAGCTCAAGTAAGAGCATGGATATGCTCAAGAGACATGGGTACTGTTAA
TGCTTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATG
GTTTACTTTCCAGGGCAGGCAAGGATGGTTATGCTGTTAACAAGGTTACTGATCCCAAAACACCCTACATAAAGAAAGAG
AAAGAGGTTGCCATGCACAATGTTACACCTACTGAAGGAACCAAAAACAACGACACAGATGTGATGTACATGAAGGCATT
ATACCACGCACTTCCAATGGATTATGTGACTGTAGCTAAGCTTCAGGGCAAGCTTGATGGCGAAGCCAACCAGACCACAG
TCCGAAAGTTGATGGACAAAATGGTGCAAGATGGATACATTAAGAATTCAGGCAACAGAAGATTAGGAAAAGCTGTCATT
CATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATACTGGAAGTTGATATCAGTGATGAAATGGCAATTGA
CACCAACGCAAGGCCTGCTGAGTTTGACCGCAGAGATCATCAGATAACTGACCAGGAAATGAAAGATGGCTCGACAAACG
GCCGCTTCCAGTCAGTTGGATCTGATCTTACCCGCACACGGGAGCTACCGGAGCAGCAGCAGAATAACAAGGACCCAAGC
AGGACTCCCACAAGCAATCGCGAGTCGGCTACGTCCCTGGAGAGTGGGGTGCTCGGGCAGAGGATCAGGAAGTCTCTGGC
TGGCGAAGAGTCGATGGGCACGCCGGACAAGCGGACCAGGAAGACCAGCATGGTGAAGGAGCCGATCCTCCAGCAGGTCA
AGCGCCAGAAGTCCTAG
Ta_5B:471303294-471303306:+ does not have available information here.