
Microexon ID | Ta_5A:494384204-494384216:+ |
Species | Triticum Aestivum | Coordinates | 5A:494384204..494384216 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATGGTGGAAG |
Microexon Amino Acid seq | EMVED |
Microexon-tag DNA Seq | ACTGTTAATGCTTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATGGTTTACTTTCGAGGGCAGGC |
Microexon-tag Amino Acid Seq | TVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAG |
Microexon-tag spanning region | 494383953-494384375 |
Microexon-tag prediction score | 0.9318 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G286500.1x |
Reference Transcript ID | TraesCS5A02G286500.1 |
Gene ID | TraesCS5A02G286500 |
Gene Name | NA |
Transcript ID | TraesCS5A02G286500.1 |
Protein ID | |
Gene ID | TraesCS5A02G286500 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS5A02G286500.1 MKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTNGEEVAMNMSRTGSKKNSA TFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDATPEDYEPPFFKGCAENEAVNIWNKNPLKM EVGNVNSKHLVLALKVKSVLDPCDANDANSDDDKMSVGHESDQDDFTDTEVHPSEVDRYVIAPNDGNGKGQSGTNSDDET QDAAHEEELTAQVRAWICSRNMGTVNASDVLSNYPDISLEMVEDILERLLKDGLLSRAGKDGYAVNKITDPKTPYIKEEV AMHNVSPTEGTKNNSGDLMYMKALYHALPMDYVTIAKLQGKLDGEANQSTVRKLMDKMVQDGYIKNSGNRRLGKAVIHSE VTNRKLLEIKKILEVDITEDMAIDTNARPAEFDRRDHQTADQEMKDGSTNGRFQSVGSDLTRTRELPEQQQTNKDPSRTP TSNRESATSLESGVLGQRIRKSLAGEESMCMPDKRTRKASMVKEPILQQVKRQKS* |
CDS seq | >TraesCS5A02G286500.1 ATGAAGATTAAGAAGCTGATGCCCATGGATGCTGAATCCAGGAGGTTGATTGATTGGATGGAGAAAGGTGTCTATGATGC CTTACAAAAGAAATATCTCAAGACCCTTCTCTTCTGTATATGTGAGAAGGAGGAAGGCCCAATGATTGAAGAGTATGCCT TCTCATTTAGCTACCCCAACACAAACGGGGAGGAAGTTGCAATGAACATGAGTCGCACAGGGAGCAAAAAGAATAGTGCC ACATTCAAGTCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATCAGAACGCTAGTTTC ACTTATGAGGACCTTGGACCAAATGCCAGAGGAGCGAACCATTCTAATGAAGCTGCTATACTATGATGATGCTACACCTG AGGATTACGAGCCTCCCTTCTTTAAGGGTTGTGCTGAGAATGAGGCCGTAAATATATGGAACAAGAACCCCTTGAAGATG GAAGTGGGGAATGTCAATAGCAAGCATCTTGTGTTAGCTTTGAAGGTTAAGAGTGTCCTTGATCCATGTGATGCTAATGA TGCTAACAGTGATGATGACAAGATGAGCGTGGGTCATGAGTCAGACCAAGATGACTTTACGGACACCGAGGTTCACCCAT CTGAAGTGGATCGTTACGTCATTGCTCCTAATGATGGTAATGGCAAAGGTCAAAGTGGTACAAACTCAGATGATGAAACT CAAGATGCTGCTCATGAGGAAGAGCTAACAGCTCAAGTAAGAGCATGGATATGCTCAAGAAACATGGGTACTGTTAATGC TTCAGATGTCCTTTCCAACTACCCTGACATATCATTGGAAATGGTGGAAGATATTTTGGAGAGGCTACTTAAAGATGGTT TACTTTCGAGGGCAGGCAAGGATGGTTATGCTGTTAACAAGATTACTGATCCCAAAACACCCTACATAAAGGAAGAGGTT GCCATGCACAATGTTTCACCTACTGAAGGAACCAAGAACAACAGTGGAGATCTGATGTATATGAAGGCATTATACCACGC ACTTCCAATGGATTATGTGACTATAGCTAAGCTTCAGGGCAAGCTTGATGGCGAAGCCAACCAGAGCACAGTCCGAAAGT TGATGGACAAAATGGTGCAAGATGGATACATTAAGAATTCAGGCAACAGAAGATTAGGCAAAGCTGTCATTCACTCTGAA GTCACCAACAGAAAGCTCCTTGAGATAAAGAAGATACTGGAAGTTGATATCACTGAAGACATGGCAATTGATACCAACGC AAGGCCTGCTGAGTTTGATCGCAGAGATCACCAAACGGCTGACCAGGAAATGAAAGATGGCTCGACAAACGGCCGCTTCC AGTCAGTTGGATCTGATCTTACCCGCACACGGGAGCTGCCGGAGCAGCAGCAGACTAACAAGGACCCAAGCAGGACTCCC ACAAGCAATCGCGAGTCGGCCACGTCCCTGGAGAGTGGGGTGCTCGGGCAGAGGATCAGGAAGTCTCTGGCTGGCGAAGA GTCGATGTGCATGCCGGACAAGCGGACCAGGAAGGCCAGCATGGTGAAGGAGCCGATCCTCCAGCAGGTCAAGCGCCAGA AGTCCTAG |
Ta_5A:494384204-494384216:+ does not have available information here.