
Microexon ID | Sl_5:10445511-10445523:+ |
Species | Solanum Lycopersicum | Coordinates | 5:10445511..10445523 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTTGATTGAAG |
Microexon Amino Acid seq | VLIED |
Microexon-tag DNA Seq | AGAGTTGAAGTGACAGATGTTCTCTCAAATTTTCCAAATATCTCAGTGGTTTTGATTGAAGACAATTTGGAAAAGCTTGTTAAGGAAGGAATTCTTTCAAGTGCTGGC |
Microexon-tag Amino Acid Seq | RVEVTDVLSNFPNISVVLIEDNLEKLVKEGILSSAG |
Microexon-tag spanning region | 10445373-10445759 |
Microexon-tag prediction score | 0.8904 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc05g015370.2.1x |
Reference Transcript ID | Solyc05g015370.2.1 |
Gene ID | Solyc05g015370.2 |
Gene Name | NA |
Transcript ID | Solyc05g015370.2.1 |
Protein ID | |
Gene ID | Solyc05g015370.2 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Solyc05g015370.2.1 MKKGGTFKSNSTDEITPNQMRSSACKMRTILLRLIYHDDVTPADYEPPFFRGCTEEEALNPWTKNPLKSEVGNVNSKHLV LALKVLRVCLILDDNKDDVMSLGADSAERDDSASDTEFSDSNEDQYIVAPVEKKNDQDKGDMVDEDDTQDPPEDEQQLVR VKDWISTYHLDRVEVTDVLSNFPNISVVLIEDNLEKLVKEGILSSAGRDTYITKMQKKFDY* |
CDS seq | >Solyc05g015370.2.1 ATGAAGAAAGGTGGAACATTCAAGTCTAACTCAACCGATGAAATAACACCCAATCAAATGAGGAGTTCTGCTTGTAAAAT GCGAACTATACTGTTGAGGCTTATTTATCATGATGATGTCACGCCTGCTGATTATGAGCCTCCTTTCTTTAGAGGCTGCA CTGAAGAGGAGGCTCTTAATCCATGGACGAAAAATCCTCTGAAATCGGAGGTCGGAAATGTCAATAGCAAGCATCTCGTG TTAGCTCTGAAGGTGTTAAGAGTGTGCTTGATCCTTGATGACAATAAAGATGATGTTATGAGCTTGGGAGCTGATTCTGC CGAGAGAGATGACAGTGCATCTGATACTGAGTTCAGCGACTCTAACGAAGACCAATACATAGTTGCACCAGTTGAAAAGA AAAATGATCAGGATAAAGGTGATATGGTCGATGAAGATGATACTCAAGATCCTCCAGAAGATGAACAACAACTTGTACGG GTTAAGGATTGGATCAGCACATACCATCTTGACAGAGTTGAAGTGACAGATGTTCTCTCAAATTTTCCAAATATCTCAGT GGTTTTGATTGAAGACAATTTGGAAAAGCTTGTTAAGGAAGGAATTCTTTCAAGTGCTGGCAGAGACACTTACATCACTA AGATGCAAAAGAAATTCGACTATTAG |
Sl_5:10445511-10445523:+ does not have available information here.