Microexon ID Sl_5:10445511-10445523:+
Species Solanum   Lycopersicum
Coordinates 5:10445511..10445523
Microexon Cluster ID MEP32
Size 13
Phase 0
Pfam Domain Motif MCM6_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTTGATTGAAG
Microexon Amino Acid seq VLIED
Microexon-tag DNA Seq AGAGTTGAAGTGACAGATGTTCTCTCAAATTTTCCAAATATCTCAGTGGTTTTGATTGAAGACAATTTGGAAAAGCTTGTTAAGGAAGGAATTCTTTCAAGTGCTGGC
Microexon-tag Amino Acid Seq RVEVTDVLSNFPNISVVLIEDNLEKLVKEGILSSAG
Microexon-tag spanning region10445373-10445759
Microexon-tag prediction score0.8904
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc05g015370.2.1x
Reference Transcript ID Solyc05g015370.2.1
Gene ID Solyc05g015370.2
Gene Name NA
Transcript ID Solyc05g015370.2.1
Protein ID
Gene ID Solyc05g015370.2
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Solyc05g015370.2.1
MKKGGTFKSNSTDEITPNQMRSSACKMRTILLRLIYHDDVTPADYEPPFFRGCTEEEALNPWTKNPLKSEVGNVNSKHLV
LALKVLRVCLILDDNKDDVMSLGADSAERDDSASDTEFSDSNEDQYIVAPVEKKNDQDKGDMVDEDDTQDPPEDEQQLVR
VKDWISTYHLDRVEVTDVLSNFPNISVVLIEDNLEKLVKEGILSSAGRDTYITKMQKKFDY*
CDS seq >Solyc05g015370.2.1
ATGAAGAAAGGTGGAACATTCAAGTCTAACTCAACCGATGAAATAACACCCAATCAAATGAGGAGTTCTGCTTGTAAAAT
GCGAACTATACTGTTGAGGCTTATTTATCATGATGATGTCACGCCTGCTGATTATGAGCCTCCTTTCTTTAGAGGCTGCA
CTGAAGAGGAGGCTCTTAATCCATGGACGAAAAATCCTCTGAAATCGGAGGTCGGAAATGTCAATAGCAAGCATCTCGTG
TTAGCTCTGAAGGTGTTAAGAGTGTGCTTGATCCTTGATGACAATAAAGATGATGTTATGAGCTTGGGAGCTGATTCTGC
CGAGAGAGATGACAGTGCATCTGATACTGAGTTCAGCGACTCTAACGAAGACCAATACATAGTTGCACCAGTTGAAAAGA
AAAATGATCAGGATAAAGGTGATATGGTCGATGAAGATGATACTCAAGATCCTCCAGAAGATGAACAACAACTTGTACGG
GTTAAGGATTGGATCAGCACATACCATCTTGACAGAGTTGAAGTGACAGATGTTCTCTCAAATTTTCCAAATATCTCAGT
GGTTTTGATTGAAGACAATTTGGAAAAGCTTGTTAAGGAAGGAATTCTTTCAAGTGCTGGCAGAGACACTTACATCACTA
AGATGCAAAAGAAATTCGACTATTAG
Sl_5:10445511-10445523:+ does not have available information here.