
Microexon ID | Sb_2:64338916-64338928:+ |
Species | Sorghum Bicolor | Coordinates | 2:64338916..64338928 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAATTGGTTGAAG |
Microexon Amino Acid seq | ELVED |
Microexon-tag DNA Seq | GCAATTAATGTTTCAGATGTCCTTTCTAACTTCCCTGACATAGCAACGGAATTGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTATACTATCCAGGGCAAGC |
Microexon-tag Amino Acid Seq | AINVSDVLSNFPDIATELVEDIMERLLKDGILSRAS |
Microexon-tag spanning region | 64338690-64339052 |
Microexon-tag prediction score | 0.9176 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OQU89747x |
Reference Transcript ID | OQU89747 |
Gene ID | SORBI_3002G257500 |
Gene Name | NA |
Transcript ID | OQU89747 |
Protein ID | |
Gene ID | SORBI_3002G257500 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OQU89747 MATPASTPKSRTTPLPPSSLPTASSPRTPRKQRRPGKMVIAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFHEKY FSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSTEEVAMNM SRTGSKKGSTTFTSNASEVTPDQMRSSACKMIRTLVSLMRTLDPMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAM NIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDENVNSGDDGMTVDNESDHDDDFSDTEVHPSKADHYIIAPNNGKSK GQGTGTISEDDTQDAAHEEELTSQVKDWICSRDNGAINVSDVLSNFPDIATELVEDIMERLLKDGILSRASKDGYTVNQK ADPKTVHIKKEAIMTDVPPIEVTKHNNGDLLYMKALYHALPMDYVTIAKLQGKLDGEASQNIVRKLIDKMVQDGYVKNSA NRRLGKAVIHSESTNRRLLEIKKILQANKGEQMAIDTNTEHAELEHKDLPRDHEVRDGSTMGCFHSVGSDLTRTRELPEL QQNVSMQSGQEASAVGKDPSRTPTSVRELAVPICSLESGVLGKRIKRSLTGGSEMQSTQDKRSRKASMVKEPILQHVKSQ NPQAQ* |
CDS seq | >OQU89747 ATGGCGACTCCGGCGAGTACCCCCAAATCCCGCACCACACCATTACCACCCTCCTCTCTCCCCACTGCCTCTTCACCCCG CACGCCGCGCAAGCAGCGCAGACCCGGCAAAATGGTGATTGCTCAGAAGACGAAGGAGGCGGAGATCACCGAGCAGGATT CGCTGCTTCTAACAAGGAATTTGCTCCGGATTGCCATATACAACATCAGCTACATCAGAGGCCTATTCCATGAGAAGTAC TTCAGTGATAAGTCGGTTCCAGCACTAGAGATGAAGATTAAGAAGCTGATGCCAATGGATGCTGAGTCAAGGAGACTGAT TGATTGGATGGAGAAAGGTGTCTATGATGCTTTGCAAAAGAAATATCTCAAGACCCTCCTCTTTTGTATCTGTGAGAAGG AGGAGGGCCCGATGATTGAGGAGTATGCCTTCTCATTTAGCTACCCCAACACCAGTACCGAGGAAGTTGCGATGAACATG AGCCGTACAGGGAGCAAAAAGGGTAGTACTACATTCACTTCAAATGCTTCAGAAGTAACTCCTGATCAGATGAGGAGCTC TGCTTGTAAGATGATCAGAACGTTGGTTTCGCTTATGAGGACCTTGGACCCAATGCCAGAGGAGCGAACCATTCTAATGA AGCTGCTGTACTATGATGATGTCACACCTGAGGATTATGAGCCTCCTTTCTTCAAGTGTTGTGCTGATAATGAGGCCATG AATATATGGAACAAGAACCCCTTGAAGATGGAAGTGGGCAATGTCAATAGCAAGCACCTTGTGTTAGCTTTGAAGGTCAA AAGTGTCCTTGATCCATGTGATGATGAAAATGTTAACAGCGGAGATGATGGAATGACTGTGGATAATGAGTCTGATCATG ATGATGACTTTTCTGACACTGAGGTTCATCCATCAAAGGCGGATCATTACATCATAGCTCCTAATAATGGAAAAAGCAAA GGTCAGGGCACTGGTACTATTTCAGAAGATGATACTCAAGATGCTGCTCATGAGGAAGAGCTAACTTCCCAAGTAAAGGA CTGGATATGCTCAAGAGACAACGGAGCAATTAATGTTTCAGATGTCCTTTCTAACTTCCCTGACATAGCAACGGAATTGG TTGAAGATATTATGGAGAGGCTACTTAAAGATGGTATACTATCCAGGGCAAGCAAAGATGGTTATACTGTTAACCAGAAG GCTGATCCAAAAACAGTGCATATAAAGAAGGAGGCCATCATGACAGATGTACCACCAATTGAAGTAACCAAACACAACAA TGGGGATCTGCTATATATGAAGGCATTATATCATGCACTTCCCATGGATTATGTGACAATAGCCAAACTTCAAGGAAAGC TGGATGGGGAAGCCAGCCAGAATATAGTCCGAAAGTTGATTGACAAGATGGTGCAAGATGGATATGTAAAGAATTCAGCT AACCGAAGACTGGGCAAAGCTGTTATTCATTCTGAATCTACCAACAGAAGGCTCCTTGAGATAAAAAAGATACTGCAAGC CAACAAAGGCGAACAGATGGCCATTGACACCAATACAGAGCATGCTGAGCTTGAGCACAAAGACCTTCCGAGAGACCATG AAGTGAGAGATGGCTCCACGATGGGTTGCTTCCACTCAGTCGGATCTGATCTTACTCGTACTCGGGAGCTACCAGAGCTG CAGCAGAATGTGTCCATGCAGAGCGGGCAAGAAGCTTCTGCAGTGGGTAAGGATCCAAGCAGGACTCCAACAAGTGTGCG TGAGCTGGCTGTACCTATTTGTTCCCTGGAGAGTGGAGTGCTTGGAAAGAGAATCAAAAGATCTCTGACTGGTGGAAGTG AGATGCAGTCTACCCAGGACAAGCGATCCAGGAAGGCTAGCATGGTGAAGGAACCAATACTCCAACATGTCAAGAGCCAA AACCCTCAGGCTCAGTGA |
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