
Microexon ID | Ps_NC_039364.1:205130776-205130788:- |
Species | Papaver somniferum | Coordinates | NC_039364.1:205130776..205130788 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCTCTGACTGAAG |
Microexon Amino Acid seq | ALTEE |
Microexon-tag DNA Seq | AATGTTGAACTGACTGATGTTCTGTCTAGCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAACATACTGTCAAGAACGGGA |
Microexon-tag Amino Acid Seq | NVELTDVLSSFPDISVALTEEIMDKLVNQNILSRTG |
Microexon-tag spanning region | 205130633-205130970 |
Microexon-tag prediction score | 0.9859 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Ps_NC_039364.1:205130776-205130788:- does not have available information here.
Microexon DNA seq | GCTCTGACTGAAG |
Microexon Amino Acid seq | ALTEE |
Microexon-tag DNA Seq | AATGTTGAACTGACTGATGTTCTGTCTAGCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAACATACTGTCAAGAACGGGA |
Microexon-tag Amino Acid seq | NVELTDVLSSFPDISVALTEEIMDKLVNQNILSRTG |
Transcript ID | Ps.45557.1 |
Gene ID | Ps.45557 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Ps.45557.1 MEDDEEISLGVDSTSTTDPSDSDSEMSHSANDDDRYIVDPVDKSRSRENNGMADHEDDTQDAEEDEHQLTRVRDWISSRH IDNVELTDVLSSFPDISVALTEEIMDKLVNQNILSRTGKDSYSISKLKAIVVKEEMDVQVNQVDEKVKPWKDDDYLYLKA LYHVLPLDYVTISKHQSKLEGEANQATVRKLLDKMACDGYVEAKSKPRLGKRVIRFE* |
CDS seq | >Ps.45557.1 ATGGAAGATGATGAGGAAATCAGCTTGGGTGTTGATTCAACGTCAACAACTGATCCTTCAGATTCAGACAGCGAGATGAG CCATTCAGCAAATGATGATGACCGGTACATTGTAGATCCTGTAGATAAATCCCGATCACGTGAAAATAATGGCATGGCGG ATCATGAAGATGATACACAGGATGCAGAAGAGGACGAGCATCAGCTAACACGTGTAAGAGACTGGATTAGCTCTCGCCAC ATTGACAATGTTGAACTGACTGATGTTCTGTCTAGCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAA ACTTGTAAACCAAAACATACTGTCAAGAACGGGAAAGGATTCTTACTCAATCAGCAAGCTGAAGGCAATTGTCGTGAAGG AAGAGATGGATGTACAAGTAAACCAAGTTGATGAGAAAGTTAAGCCATGGAAAGATGATGACTACTTGTACTTGAAGGCT CTGTATCATGTCCTTCCACTGGATTATGTTACAATATCTAAACATCAAAGTAAGCTGGAAGGAGAGGCAAATCAGGCAAC TGTGCGTAAACTGCTCGATAAGATGGCTTGTGATGGATATGTGGAAGCCAAGAGCAAACCAAGATTAGGTAAACGTGTCA TTCGATTTGAATGA |