Microexon ID Ps_NC_039359.1:89331639-89331651:-
Species Papaver somniferum
Coordinates NC_039359.1:89331639..89331651
Microexon Cluster ID MEP32
Size 13
Phase 0
Pfam Domain Motif MCM6_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTCTGACTGAAG
Microexon Amino Acid seq ALTEE
Microexon-tag DNA Seq AATGTTGAACTGACTGATGTTCTCTCTATCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATATACTGTCAAGAACGGGA
Microexon-tag Amino Acid Seq NVELTDVLSIFPDISVALTEEIMDKLVNQNILSRTG
Microexon-tag spanning region89331515-89332023
Microexon-tag prediction score0.9853
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Ps_NC_039359.1:89331639-89331651:- does not have available information here.
Microexon DNA seq GCTCTGACTGAAG
Microexon Amino Acid seq ALTEE
Microexon-tag DNA Seq AATGTTGAACTGACTGATGTTCTCTCTATCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATATACTGTCAAGAACGGGA
Microexon-tag Amino Acid seq NVELTDVLSIFPDISVALTEEIMDKLVNQNILSRTG
Transcript ID Ps.11281.1
Gene ID Ps.11281
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Ps.11281.1
MEKGVYDALQKKYLKMLLFCISEAIDGPMVEEYAFSFSYSNSDSEEVMMNISRTGNKKQGATFKSNGNTDITPNQMRSSG
CKMVRTLVQLMRTLDRKPEERTILMMLLYYEDVTPIDYEPPFFRGCSEQEANRPWLKNPLKMEIGNVNSKHFVLALKVKS
ILDPCQDENNDMEDDEEISLGVDSTPTTDPSDSDSEMSHSANDDDRYIVAPVDKARSRGNNGMADHEDDTQDAEEDEHLL
TRVRDWISSRHIDNVELTDVLSIFPDISVALTEEIMDKLVNQNILSRTGKDSYSISKLKAIVVKEKMDVQAN*
CDS seq >Ps.11281.1
ATGGAAAAAGGAGTTTATGATGCATTACAGAAGAAATACCTTAAGATGCTTCTGTTCTGCATATCTGAAGCTATTGATGG
ACCTATGGTAGAAGAATATGCTTTTTCATTTAGCTATTCGAATTCTGACAGTGAAGAGGTGATGATGAACATAAGTCGTA
CTGGAAATAAGAAACAAGGAGCAACATTCAAGTCTAATGGCAATACAGACATTACACCAAACCAAATGAGGAGTTCTGGT
TGTAAAATGGTCCGAACTCTGGTTCAATTGATGCGAACACTGGACCGTAAGCCAGAAGAGCGTACAATCTTGATGATGCT
TCTTTATTACGAGGATGTCACTCCTATAGACTATGAGCCTCCATTCTTCAGAGGCTGCTCAGAACAAGAAGCTAACCGTC
CATGGTTGAAGAACCCTCTCAAAATGGAAATCGGAAATGTTAACAGCAAGCATTTCGTACTAGCTCTCAAGGTCAAAAGC
ATCCTGGATCCTTGTCAAGATGAGAACAATGACATGGAAGATGATGAGGAAATCAGCTTGGGTGTTGATTCAACGCCAAC
AACTGATCCTTCAGATTCAGATAGTGAGATGAGCCATTCAGCAAATGATGATGATAGGTACATTGTAGCTCCCGTGGATA
AAGCCCGATCACGTGGAAACAATGGCATGGCGGATCATGAAGATGATACACAGGATGCAGAAGAGGACGAACATCTGTTA
ACACGTGTAAGAGACTGGATTAGCTCTCGCCACATTGACAATGTTGAACTGACTGATGTTCTCTCTATCTTCCCGGACAT
ATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATATACTGTCAAGAACGGGAAAGGATTCTTACT
CCATCAGCAAGCTGAAGGCAATTGTTGTGAAGGAAAAGATGGATGTACAAGCAAACTAA