Microexon ID Ps_NC_039359.1:122633362-122633374:+
Species Papaver somniferum
Coordinates NC_039359.1:122633362..122633374
Microexon Cluster ID MEP32
Size 13
Phase 0
Pfam Domain Motif MCM6_C
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCTCTGACTGAAG
Microexon Amino Acid seq ALTEE
Microexon-tag DNA Seq AATGTTGAACTGACTGATTTTTTCTCTAGCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATGTACTGTCAAGAACGGGA
Microexon-tag Amino Acid Seq NVELTDFFSSFPDISVALTEEIMDKLVNQNVLSRTG
Microexon-tag spanning region122632990-122633516
Microexon-tag prediction score0.9774
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Ps_NC_039359.1:122633362-122633374:+ does not have available information here.
Microexon DNA seq GCTCTGACTGAAG
Microexon Amino Acid seq ALTEE
Microexon-tag DNA Seq AATGTTGAACTGACTGATTTTTTCTCTAGCTTCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATGTACTGTCAAGAACGGGA
Microexon-tag Amino Acid seq NVELTDFFSSFPDISVALTEEIMDKLVNQNVLSRTG
Transcript ID Ps.12321.3
Gene ID Ps.12321
Gene Name NA
Pfam domain motif DUF5457
Motif E-value 0.2
Motif start 55
Motif end 107
Protein seq >Ps.12321.3
MTDKARSRENNGMADHEDDTQDAEEDEHQLTRVRDWISSRHINNVELTDFFSSFPDISVALTEEIMDKLVNQNVLSRTGK
DSYSISKLKAIVVKEEMDVQVNQVDEKVQRGNDEDYLYVKALYHVLPLDYVTISKLQSKLEGEANQATVRKLLDRMACDG
YLEAKSKPRLGKRVIRSELTDKKLLEVKNVLEIKLSAMEISEPQNISTCGGLHSVGSDLTRTREISVDTQQNASSRTQEQ
LGNNTPIRRNEPAASRESGIPGSDIRNGVDGRGFTNCREGDDTFRRRPSQEKRSRKTSMVKEPIHQNMKRQKSQSGGALE
*
CDS seq >Ps.12321.3
ATGACAGATAAAGCCCGATCACGTGAAAACAATGGCATGGCGGATCATGAAGATGATACACAGGATGCAGAAGAGGACGA
ACATCAGTTAACACGTGTAAGAGACTGGATTAGCTCTCGCCACATTAACAATGTTGAACTGACTGATTTTTTCTCTAGCT
TCCCGGACATATCAGTGGCTCTGACTGAAGAAATCATGGATAAACTTGTAAACCAAAATGTACTGTCAAGAACGGGAAAG
GATTCTTACTCCATCAGCAAGCTGAAGGCAATTGTTGTGAAGGAAGAGATGGATGTACAAGTAAACCAAGTTGATGAGAA
AGTTCAGCGAGGGAATGATGAAGACTACTTGTACGTGAAGGCTCTGTATCATGTCCTCCCACTGGATTATGTTACAATAT
CTAAACTTCAAAGTAAGCTGGAAGGAGAGGCAAATCAGGCAACTGTGCGTAAACTGCTCGATAGGATGGCTTGTGATGGA
TATTTGGAAGCCAAGAGCAAACCAAGATTAGGTAAACGTGTCATTCGATCTGAATTGACTGACAAGAAGCTACTTGAGGT
CAAGAATGTTTTGGAGATCAAGTTATCGGCAATGGAGATAAGTGAACCTCAAAACATATCAACCTGCGGTGGTCTCCACT
CTGTTGGTTCTGATCTTACCAGAACTCGAGAAATATCAGTTGATACTCAGCAGAATGCATCGTCTAGAACTCAGGAGCAA
CTTGGAAACAACACACCCATTCGCAGAAATGAGCCTGCAGCATCAAGGGAGAGTGGCATACCAGGGAGCGATATACGAAA
TGGTGTGGATGGGAGAGGGTTCACTAACTGTCGTGAGGGTGATGATACCTTCCGTAGACGTCCCAGTCAGGAAAAGCGCT
CCAGGAAAACTAGCATGGTGAAAGAGCCCATCCACCAAAACATGAAGCGTCAGAAATCTCAAAGTGGTGGTGCGTTGGAG
TAA