
Microexon ID | Os_9:19626392-19626404:+ |
Species | Oryza sativa | Coordinates | 9:19626392..19626404 |
Microexon Cluster ID | MEP32 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | MCM6_C |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AMYRTTGAWSTKWCWGATGTYCTYTCTARYTTCCCKGACATMTCARTGGHWCTGRYTGAAGAWATYATGGAKARRCTWSTWAAMSAWRRTRTACTRTCAARRRCRGGA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATGGTTGAAG |
Microexon Amino Acid seq | EMVED |
Microexon-tag DNA Seq | AGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAA |
Microexon-tag Amino Acid Seq | SLEVSDVLVNFPDISMEMVEDIMERLLKDGLLSRAK |
Microexon-tag spanning region | 19626148-19626545 |
Microexon-tag prediction score | 0.9283 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0506800-01x |
Reference Transcript ID | Os09t0506800-01 |
Gene ID | Os09g0506800 |
Gene Name | PAIR2 |
Transcript ID | Os09t0506800-01 |
Protein ID | Os09t0506800-01 |
Gene ID | Os09g0506800 |
Gene Name | PAIR2 |
Pfam domain motif | DUF4423 |
Motif E-value | 0.92 |
Motif start | 329 |
Motif end | 375 |
Protein seq | >Os09t0506800-01 MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDA LQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVS LMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNN VNSEDDNMSLDNESDQDNDFSDTEVRPSEAERYIVAPNDGTCKGQNGTISEDDTQDPVHEEELTAQVREWICSRDTESLE VSDVLVNFPDISMEMVEDIMERLLKDGLLSRAKKDSYSVNKIADPTTPHIKKEVIMQNVSPTEGTKNSNGDLMYMKALYH ALPMDYVSVGKLHGKLDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAVIHSEVTNRKLLEIKKILEVDIAEQMAIDTN AEPGEPERKDHLSGHEMRDGSTMGCLQSVGSDLTRTRELPEPQQNVSMQSGQEASTVDKDPSRTPTSVREASVCSLESGV LGQKVRKSLAGAGGTQCSQDKRFRKASTVKEPILQYVKRQKSQVQVQVQ* |
CDS seq | >Os09t0506800-01 ATGGTGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCAT TGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGA TGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCA CTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATT CTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTA CATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCA CTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGA AGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGG AAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAAT GTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCC ATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATA CTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAG GTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGG TTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGG TCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCAT GCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAA GTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTG AAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAAT GCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCA GTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAG CTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCGAGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTT CTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAG CACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGA |
Microexon DNA seq | GAAATGGTTGAAG |
Microexon Amino Acid seq | EMVED |
Microexon-tag DNA Seq | AGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAA |
Microexon-tag Amino Acid seq | SLEVSDVLVNFPDISMEMVEDIMERLLKDGLLSRAK |
Transcript ID | Os09t0506800-01 |
Gene ID | Os.38222 |
Gene Name | PAIR2 |
Pfam domain motif | DUF4423 |
Motif E-value | 0.93 |
Motif start | 329 |
Motif end | 375 |
Protein seq | >Os09t0506800-01 MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDA LQKKYLKTLLFCICEKEEGPMIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVS LMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNN VNSEDDNMSLDNESDQDNDFSDTEVRPSEAERYIVAPNDGTCKGQNGTISEDDTQDPVHEEELTAQVREWICSRDTESLE VSDVLVNFPDISMEMVEDIMERLLKDGLLSRAKKDSYSVNKIADPTTPHIKKEVIMQNVSPTEGTKNSNGDLMYMKALYH ALPMDYVSVGKLHGKLDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAVIHSEVTNRKLLEIKKILEVDIAEQMAIDTN AEPGEPERKDHLSGHEMRDGSTMGCLQSVGSDLTRTRELPEPQQNVSMQSGQEASTVDKDPSRTPTSVREASVCSLESGV LGQKVRKSLAGAGGTQCSQDKRFRKASTVKEPILQYVKRQKSQVQVQVQ* |
CDS seq | >Os09t0506800-01 ATGGTGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCAT TGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGA TGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCA CTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATT CTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTA CATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCA CTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGA AGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGG AAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAAT GTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCC ATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATA CTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAG GTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGG TTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGG TCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCAT GCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAA GTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTG AAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAAT GCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCA GTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAG CTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCGAGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTT CTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAG CACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGA |