Microexon ID Zm_9:18821254-18821266:-
Species Zea mays
Coordinates 9:18821254..18821266
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGACACTTACG
Microexon Amino Acid seq KDTYG
Microexon-tag DNA Seq GCTGTTATGTCGGGATTCCGTTGGTCCATGACTCAGATTCTACTGCAGAAAGACACTTACGGCCTGAAGAATCCAATTACCTTGATGAGCCATGTTACGCCAGTGATG
Microexon-tag Amino Acid Seq AVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVM
Microexon-tag spanning region18819760-18821448
Microexon-tag prediction score0.9676
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d045316_T001x
Reference Transcript ID Zm00001d045316_T001
Gene ID Zm00001d045316
Gene Name NA
Transcript ID Zm00001d045316_T001
Protein ID Zm00001d045316_P001
Gene ID Zm00001d045316
Gene Name NA
Pfam domain motif TPT
Motif E-value 3.5e-21
Motif start 87
Motif end 358
Protein seq >Zm00001d045316_P001
MHPKPEGGEANGAAAEAGSPRSGNFRQRSMHAAPADPEAARRAFDVENPPPCSAAAGGGLRPSESVTKLESLERAERAAL
APAVVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIFLQSKGPEAAVEMGWKDYFIR
VVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENASIKLLGIIVVISTGVLLTVSKETEFDFLGF
IFVTLAAVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFKKNSYFDNPWHVMRSCLLMLI
GGTLAFFMVLTEYILISATSAITVTIAGVVKESVTILVHLHQEFSSTIPPFPKERYEKFKRGHIDEDDANSPSCTGDVKY
IILDDLEYQDEFEEEDT*
CDS seq >Zm00001d045316_T001
ATGCATCCCAAGCCCGAGGGCGGCGAAGCCAACGGGGCCGCCGCGGAGGCGGGCTCCCCGCGGTCCGGCAACTTCCGGCA
GCGGAGCATGCACGCCGCCCCCGCGGATCCGGAGGCGGCGCGCCGGGCGTTCGATGTCGAGAACCCCCCGCCTTGCTCCG
CCGCCGCGGGCGGCGGGCTCCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGCGCGGAGCGCGCCGCGCTG
GCGCCCGCCGTCGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACCCTATATAACAA
GACGCTGCTGGGGGACAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGC
TCTCCAAGCTCATAATCTTCTTACAGTCCAAGGGGCCGGAGGCCGCCGTCGAGATGGGGTGGAAAGACTACTTCATCAGA
GTCGTGCCAACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCATCTCTTGTGTTCATCTCGGTGACGTTTGC
TACTATGTGTAAATCAGCCTCCCCGATATTCCTTTTGCTTTTTGCGTTTGCATTTAGGTTGGAGAATGCTAGCATCAAGC
TTCTAGGAATTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTTGGGCTTC
ATTTTTGTGACGCTTGCTGCTGTTATGTCGGGATTCCGTTGGTCCATGACTCAGATTCTACTGCAGAAAGACACTTACGG
CCTGAAGAATCCAATTACCTTGATGAGCCATGTTACGCCAGTGATGGCCATAGCCACTATGATACTATCTCTATTACTGG
ACCCTTGGAGTGAATTTAAAAAAAATTCATATTTCGATAACCCTTGGCATGTCATGCGCAGTTGCCTACTTATGCTTATA
GGAGGAACTTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAACAAGTGCCATAACCGTCACAATAGC
TGGAGTAGTAAAAGAATCTGTAACCATTTTGGTTCATTTACATCAAGAATTTTCATCTACGATACCCCCTTTCCCAAAAG
AAAGGTATGAGAAATTCAAAAGGGGTCATATAGATGAGGATGATGCCAACTCTCCTTCATGTACTGGTGACGTCAAGTAC
ATTATTCTAGACGACTTGGAGTATCAGGATGAATTTGAGGAGGAAGATACATAA
Microexon DNA seq AAAGACACTTACG
Microexon Amino Acid seq KDTYG
Microexon-tag DNA Seq GCTGTTATGTCGGGATTCCGTTGGTCCATGACTCAGATTCTACTGCAGAAAGACACTTACGGCCTGAAGAATCCAATTACCTTGATGAGCCATGTTACGCCAGTGATG
Microexon-tag Amino Acid seq AVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVM
Transcript ID Zm00001d045316_T002
Gene ID Zm.36411
Gene Name NA
Pfam domain motif TPT
Motif E-value 1.1e-26
Motif start 87
Motif end 386
Protein seq >Zm00001d045316_T002
MHPKPEGGEANGAAAEAGSPRSGNFRQRSMHAAPADPEAARRAFDVENPPPCSAAAGGGLRPSESVTKLESLERAERAAL
APAVVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIFLQSKGPEAAVEMGWKDYFIR
VVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENASIKLLGIIVVISTGVLLTVSKETEFDFLGF
IFVTLAAVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFKKNSYFDNPWHVMRSCLLMLI
GGTLAFFMVLTEYILISATSAITVTIAGVVKESVTILVAVFYFHDEFTWLKGVGLFTIMVGVSLFNWYKYEKFKRGHIDE
DDANSPSCTGDVKYIILDDLEYQDEFEEEDT*
CDS seq >Zm00001d045316_T002
ATGCATCCCAAGCCCGAGGGCGGCGAAGCCAACGGGGCCGCCGCGGAGGCGGGCTCCCCGCGGTCCGGCAACTTCCGGCA
GCGGAGCATGCACGCCGCCCCCGCGGATCCGGAGGCGGCGCGCCGGGCGTTCGATGTCGAGAACCCCCCGCCTTGCTCCG
CCGCCGCGGGCGGCGGGCTCCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGCGCGGAGCGCGCCGCGCTG
GCGCCCGCCGTCGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACCCTATATAACAA
GACGCTGCTGGGGGACAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGC
TCTCCAAGCTCATAATCTTCTTACAGTCCAAGGGGCCGGAGGCCGCCGTCGAGATGGGGTGGAAAGACTACTTCATCAGA
GTCGTGCCAACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCATCTCTTGTGTTCATCTCGGTGACGTTTGC
TACTATGTGTAAATCAGCCTCCCCGATATTCCTTTTGCTTTTTGCGTTTGCATTTAGGTTGGAGAATGCTAGCATCAAGC
TTCTAGGAATTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTTGGGCTTC
ATTTTTGTGACGCTTGCTGCTGTTATGTCGGGATTCCGTTGGTCCATGACTCAGATTCTACTGCAGAAAGACACTTACGG
CCTGAAGAATCCAATTACCTTGATGAGCCATGTTACGCCAGTGATGGCCATAGCCACTATGATACTATCTCTATTACTGG
ACCCTTGGAGTGAATTTAAAAAAAATTCATATTTCGATAACCCTTGGCATGTCATGCGCAGTTGCCTACTTATGCTTATA
GGAGGAACTTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAACAAGTGCCATAACCGTCACAATAGC
TGGAGTAGTAAAAGAATCTGTAACCATTTTGGTTGCGGTATTTTATTTCCATGATGAATTTACTTGGTTGAAAGGGGTTG
GTCTTTTCACCATTATGGTTGGTGTTAGCTTATTCAATTGGTACAAGTATGAGAAATTCAAAAGGGGTCATATAGATGAG
GATGATGCCAACTCTCCTTCATGTACTGGTGACGTCAAGTACATTATTCTAGACGACTTGGAGTATCAGGATGAATTTGA
GGAGGAAGATACATAA