
Microexon ID | Zm_6:77845003-77845015:- |
Species | Zea mays | Coordinates | 6:77845003..77845015 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGACAATTACG |
Microexon Amino Acid seq | KDNYG |
Microexon-tag DNA Seq | GCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKDNYGLKNPITLMSHVTPVM |
Microexon-tag spanning region | 77844321-77845197 |
Microexon-tag prediction score | 0.9677 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d036222_T003x |
Reference Transcript ID | Zm00001d036222_T003 |
Gene ID | Zm00001d036222 |
Gene Name | NA |
Transcript ID | Zm00001d036222_T002 |
Protein ID | Zm00001d036222_P002 |
Gene ID | Zm00001d036222 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 3.8e-25 |
Motif start | 84 |
Motif end | 394 |
Protein seq | >Zm00001d036222_P002 MHPKPEGGGDDDGAAAEVGSPRSGYFRQRSMHAAAAAADPEAARRPFHVENPPCSAGGGLRPSESVTKLESLERAALAPA VVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIWFQPKGPEAAVDMGWKDYFMRVVP TALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFV TLAAVMSGFRWSMTQILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFQKNSYFDSPWHVM RSCLLMLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFTIMVGVSLFNWYKYER FKRGQINEDDVSSPFTGDVKYIIIDDLEYQNEFEEDT* |
CDS seq | >Zm00001d036222_T002 ATGCATCCCAAGCCCGAGGGCGGCGGCGACGACGACGGGGCCGCCGCGGAGGTGGGCTCCCCGCGGTCCGGCTACTTCCG GCAGCGGAGCATGCACGCCGCCGCCGCCGCCGCGGATCCGGAGGCGGCGCGCCGGCCGTTCCACGTCGAGAACCCGCCTT GCTCCGCCGGCGGGGGGCTGCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGTGCCGCGCTGGCGCCCGCC GTGGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACGCTATATAACAAGACGCTGCT GGGGGATAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGCTCTCCAAGC TCATCATCTGGTTCCAGCCCAAGGGGCCCGAGGCCGCCGTCGACATGGGGTGGAAGGACTACTTCATGAGAGTCGTGCCA ACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCGTCTCTGGTGTTCATCTCGGTGACGTTTGCTACTATGTG TAAATCAGCCTCCCCGATATTCTTGTTGCTCTTTGCTTTTGCATTTAGGTTGGAGAATCCTAGCATCAAGCTTCTAGGAA TTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTGGGGCTTCATTTTTGTG ACGCTTGCTGCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTAT GCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATGGCCATCGCCA CTATGATACTATCTCTATTACTGGATCCTTGGAGTGAATTTCAAAAGAATTCATATTTTGATAGCCCTTGGCATGTCATG CGCAGTTGCTTACTTATGCTTATCGGAGGATCCTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAAC AAGTGCCATAACCGTGACGATAGCTGGGGTAGTAAAAGAAGCTGTAACCATTTTGGTTGCGGTATTTTATTTCCATGATG AATTTACTTGGTTGAAAGGGTTTGGTCTTTTCACCATTATGGTTGGTGTTAGCTTGTTCAATTGGTACAAGTATGAGAGA TTCAAAAGGGGTCAGATAAATGAGGATGACGTCAGCTCTCCATTTACTGGTGACGTCAAGTACATTATTATAGACGACTT GGAATATCAGAATGAATTTGAGGAAGATACATAA |
Microexon DNA seq | AAAGACAATTACG |
Microexon Amino Acid seq | KDNYG |
Microexon-tag DNA Seq | CAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTATGCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATG |
Microexon-tag Amino Acid seq | QILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVM |
Transcript ID | Zm00001d036222_T002 |
Gene ID | Zm.27008 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 3.8e-25 |
Motif start | 84 |
Motif end | 394 |
Protein seq | >Zm00001d036222_T002 MHPKPEGGGDDDGAAAEVGSPRSGYFRQRSMHAAAAAADPEAARRPFHVENPPCSAGGGLRPSESVTKLESLERAALAPA VVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIWFQPKGPEAAVDMGWKDYFMRVVP TALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFV TLAAVMSGFRWSMTQILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFQKNSYFDSPWHVM RSCLLMLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFTIMVGVSLFNWYKYER FKRGQINEDDVSSPFTGDVKYIIIDDLEYQNEFEEDT* |
CDS seq | >Zm00001d036222_T002 ATGCATCCCAAGCCCGAGGGCGGCGGCGACGACGACGGGGCCGCCGCGGAGGTGGGCTCCCCGCGGTCCGGCTACTTCCG GCAGCGGAGCATGCACGCCGCCGCCGCCGCCGCGGATCCGGAGGCGGCGCGCCGGCCGTTCCACGTCGAGAACCCGCCTT GCTCCGCCGGCGGGGGGCTGCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGTGCCGCGCTGGCGCCCGCC GTGGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACGCTATATAACAAGACGCTGCT GGGGGATAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGCTCTCCAAGC TCATCATCTGGTTCCAGCCCAAGGGGCCCGAGGCCGCCGTCGACATGGGGTGGAAGGACTACTTCATGAGAGTCGTGCCA ACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCGTCTCTGGTGTTCATCTCGGTGACGTTTGCTACTATGTG TAAATCAGCCTCCCCGATATTCTTGTTGCTCTTTGCTTTTGCATTTAGGTTGGAGAATCCTAGCATCAAGCTTCTAGGAA TTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTGGGGCTTCATTTTTGTG ACGCTTGCTGCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTAT GCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATGGCCATCGCCA CTATGATACTATCTCTATTACTGGATCCTTGGAGTGAATTTCAAAAGAATTCATATTTTGATAGCCCTTGGCATGTCATG CGCAGTTGCTTACTTATGCTTATCGGAGGATCCTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAAC AAGTGCCATAACCGTGACGATAGCTGGGGTAGTAAAAGAAGCTGTAACCATTTTGGTTGCGGTATTTTATTTCCATGATG AATTTACTTGGTTGAAAGGGTTTGGTCTTTTCACCATTATGGTTGGTGTTAGCTTGTTCAATTGGTACAAGTATGAGAGA TTCAAAAGGGGTCAGATAAATGAGGATGACGTCAGCTCTCCATTTACTGGTGACGTCAAGTACATTATTATAGACGACTT GGAATATCAGAATGAATTTGAGGAAGATACATAA |