Microexon ID Zm_6:77845003-77845015:-
Species Zea mays
Coordinates 6:77845003..77845015
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGACAATTACG
Microexon Amino Acid seq KDNYG
Microexon-tag DNA Seq GCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATG
Microexon-tag Amino Acid Seq AVMSGFRWSMTQILLQKDNYGLKNPITLMSHVTPVM
Microexon-tag spanning region77844321-77845197
Microexon-tag prediction score0.9677
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d036222_T003x
Reference Transcript ID Zm00001d036222_T003
Gene ID Zm00001d036222
Gene Name NA
Transcript ID Zm00001d036222_T002
Protein ID Zm00001d036222_P002
Gene ID Zm00001d036222
Gene Name NA
Pfam domain motif TPT
Motif E-value 3.8e-25
Motif start 84
Motif end 394
Protein seq >Zm00001d036222_P002
MHPKPEGGGDDDGAAAEVGSPRSGYFRQRSMHAAAAAADPEAARRPFHVENPPCSAGGGLRPSESVTKLESLERAALAPA
VVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIWFQPKGPEAAVDMGWKDYFMRVVP
TALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFV
TLAAVMSGFRWSMTQILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFQKNSYFDSPWHVM
RSCLLMLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFTIMVGVSLFNWYKYER
FKRGQINEDDVSSPFTGDVKYIIIDDLEYQNEFEEDT*
CDS seq >Zm00001d036222_T002
ATGCATCCCAAGCCCGAGGGCGGCGGCGACGACGACGGGGCCGCCGCGGAGGTGGGCTCCCCGCGGTCCGGCTACTTCCG
GCAGCGGAGCATGCACGCCGCCGCCGCCGCCGCGGATCCGGAGGCGGCGCGCCGGCCGTTCCACGTCGAGAACCCGCCTT
GCTCCGCCGGCGGGGGGCTGCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGTGCCGCGCTGGCGCCCGCC
GTGGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACGCTATATAACAAGACGCTGCT
GGGGGATAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGCTCTCCAAGC
TCATCATCTGGTTCCAGCCCAAGGGGCCCGAGGCCGCCGTCGACATGGGGTGGAAGGACTACTTCATGAGAGTCGTGCCA
ACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCGTCTCTGGTGTTCATCTCGGTGACGTTTGCTACTATGTG
TAAATCAGCCTCCCCGATATTCTTGTTGCTCTTTGCTTTTGCATTTAGGTTGGAGAATCCTAGCATCAAGCTTCTAGGAA
TTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTGGGGCTTCATTTTTGTG
ACGCTTGCTGCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTAT
GCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATGGCCATCGCCA
CTATGATACTATCTCTATTACTGGATCCTTGGAGTGAATTTCAAAAGAATTCATATTTTGATAGCCCTTGGCATGTCATG
CGCAGTTGCTTACTTATGCTTATCGGAGGATCCTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAAC
AAGTGCCATAACCGTGACGATAGCTGGGGTAGTAAAAGAAGCTGTAACCATTTTGGTTGCGGTATTTTATTTCCATGATG
AATTTACTTGGTTGAAAGGGTTTGGTCTTTTCACCATTATGGTTGGTGTTAGCTTGTTCAATTGGTACAAGTATGAGAGA
TTCAAAAGGGGTCAGATAAATGAGGATGACGTCAGCTCTCCATTTACTGGTGACGTCAAGTACATTATTATAGACGACTT
GGAATATCAGAATGAATTTGAGGAAGATACATAA
Microexon DNA seq AAAGACAATTACG
Microexon Amino Acid seq KDNYG
Microexon-tag DNA Seq CAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTATGCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATG
Microexon-tag Amino Acid seq QILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVM
Transcript ID Zm00001d036222_T002
Gene ID Zm.27008
Gene Name NA
Pfam domain motif TPT
Motif E-value 3.8e-25
Motif start 84
Motif end 394
Protein seq >Zm00001d036222_T002
MHPKPEGGGDDDGAAAEVGSPRSGYFRQRSMHAAAAAADPEAARRPFHVENPPCSAGGGLRPSESVTKLESLERAALAPA
VVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIWFQPKGPEAAVDMGWKDYFMRVVP
TALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENPSIKLLGIIVVISTGVLLTVSKETEFDFWGFIFV
TLAAVMSGFRWSMTQILLQVSVLTNFMPFLKDNYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFQKNSYFDSPWHVM
RSCLLMLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFTIMVGVSLFNWYKYER
FKRGQINEDDVSSPFTGDVKYIIIDDLEYQNEFEEDT*
CDS seq >Zm00001d036222_T002
ATGCATCCCAAGCCCGAGGGCGGCGGCGACGACGACGGGGCCGCCGCGGAGGTGGGCTCCCCGCGGTCCGGCTACTTCCG
GCAGCGGAGCATGCACGCCGCCGCCGCCGCCGCGGATCCGGAGGCGGCGCGCCGGCCGTTCCACGTCGAGAACCCGCCTT
GCTCCGCCGGCGGGGGGCTGCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGTGCCGCGCTGGCGCCCGCC
GTGGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCACGCTATATAACAAGACGCTGCT
GGGGGATAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCGCTGCAGGCGGGGCTCTCCAAGC
TCATCATCTGGTTCCAGCCCAAGGGGCCCGAGGCCGCCGTCGACATGGGGTGGAAGGACTACTTCATGAGAGTCGTGCCA
ACTGCTCTCGGGACGGCCTTGGACATAAACCTGAGCAACGCGTCTCTGGTGTTCATCTCGGTGACGTTTGCTACTATGTG
TAAATCAGCCTCCCCGATATTCTTGTTGCTCTTTGCTTTTGCATTTAGGTTGGAGAATCCTAGCATCAAGCTTCTAGGAA
TTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACGGAGTTTGACTTCTGGGGCTTCATTTTTGTG
ACGCTTGCTGCTGTTATGTCAGGATTCCGGTGGTCCATGACTCAGATTCTGTTGCAGGTAAGCGTATTGACGAATTTTAT
GCCTTTTCTTAAAGACAATTACGGCCTGAAGAATCCGATTACCTTGATGAGCCATGTTACACCAGTGATGGCCATCGCCA
CTATGATACTATCTCTATTACTGGATCCTTGGAGTGAATTTCAAAAGAATTCATATTTTGATAGCCCTTGGCATGTCATG
CGCAGTTGCTTACTTATGCTTATCGGAGGATCCTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAAC
AAGTGCCATAACCGTGACGATAGCTGGGGTAGTAAAAGAAGCTGTAACCATTTTGGTTGCGGTATTTTATTTCCATGATG
AATTTACTTGGTTGAAAGGGTTTGGTCTTTTCACCATTATGGTTGGTGTTAGCTTGTTCAATTGGTACAAGTATGAGAGA
TTCAAAAGGGGTCAGATAAATGAGGATGACGTCAGCTCTCCATTTACTGGTGACGTCAAGTACATTATTATAGACGACTT
GGAATATCAGAATGAATTTGAGGAAGATACATAA