Microexon ID Zm_3:201243180-201243192:+
Species Zea mays
Coordinates 3:201243180..201243192
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGAGGAATACG
Microexon Amino Acid seq KEEYG
Microexon-tag DNA Seq GCTGTTATGTCTGGTTTCCGCTGGTCCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCGGTGATG
Microexon-tag Amino Acid Seq AVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPVM
Microexon-tag spanning region201242964-201246589
Microexon-tag prediction score0.9825
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d043473_T001x
Reference Transcript ID Zm00001d043473_T001
Gene ID Zm00001d043473
Gene Name NA
Transcript ID Zm00001d043473_T001
Protein ID NA
Gene ID Zm00001d043473
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq
Microexon DNA seq AAAGAGGAATACG
Microexon Amino Acid seq KEEYG
Microexon-tag DNA Seq GCTGTTATGTCTGGTTTCCGCTGGTCCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCGGTGATG
Microexon-tag Amino Acid seq AVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPVM
Transcript ID Zm00001d043473_T009
Gene ID Zm.16387
Gene Name NA
Pfam domain motif TPT
Motif E-value 2e-31
Motif start 128
Motif end 427
Protein seq >Zm00001d043473_T009
MGDCVVEDGHVHHPSDEVEGAVPLTVAVELDERAGESREEGGGQRKKVGGIRREPSFSRWCRDTSVAAASNTAVAAAISD
SDSDDSEEFDLPLLPSSSGGGSSPMDIEAGATVRSDDLPISPRLLAKVIGLIACWYTLSTCLTLYNKEMLGKHMWKFPAP
FLMNTVHFTMQAVASRAIVWFQQRGLEGGPNKMSWKDYCLRVVPTALATALDINLSNISLVFITVTFATMCKSASPIFIL
LFAFMFRLEKPSFSLLGIMLVVSFGVLLTVAKETEFNLWGFIFIMLAAVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVT
PVMAIVTAIISIVMDPWHDFRASHFFDSSAHIIRSSLLLLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVA
VLFFNDPFTWLKALGLAIIIFGVSLFNIYKKHVFICNAWRTLSNDCLCYMMKV*
CDS seq >Zm00001d043473_T009
ATGGGGGACTGCGTCGTCGAGGACGGCCACGTGCACCATCCCTCGGATGAGGTGGAGGGCGCGGTTCCATTGACGGTAGC
CGTGGAGCTCGATGAGCGGGCGGGAGAGTCACGGGAGGAGGGTGGTGGGCAGCGGAAGAAAGTGGGCGGGATCCGAAGGG
AGCCGTCGTTCTCGCGGTGGTGCAGGGACACCTCTGTCGCCGCCGCCTCCAATACTGCCGTTGCTGCGGCGATCAGCGAC
AGCGACAGCGACGACTCAGAGGAGTTCGACCTACCGCTCCTGCCATCCTCCTCGGGCGGCGGGAGCTCACCTATGGACAT
TGAGGCGGGGGCGACGGTGAGATCTGATGATCTGCCGATCTCACCGAGGTTGCTTGCGAAGGTCATTGGGTTGATAGCGT
GTTGGTACACGCTGAGCACATGCTTGACTCTGTACAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCGGCGCCA
TTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCGTCCAGGGCCATAGTGTGGTTCCAGCAACGTGGCCTGGA
GGGAGGGCCAAACAAAATGTCGTGGAAGGATTACTGTTTACGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGATATAA
ATCTGAGCAACATTTCACTTGTTTTCATTACTGTGACATTTGCTACAATGTGTAAATCTGCTTCTCCAATTTTCATTCTT
CTCTTTGCTTTTATGTTCAGGCTTGAGAAACCAAGCTTTAGCCTTCTTGGAATCATGCTGGTTGTTTCGTTTGGAGTTCT
ACTAACAGTTGCTAAAGAGACAGAATTTAATCTGTGGGGATTTATATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCC
GCTGGTCCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACC
CCGGTGATGGCAATAGTAACAGCAATTATTTCCATTGTGATGGATCCATGGCACGACTTCAGAGCAAGTCACTTTTTTGA
TAGTTCTGCTCACATAATAAGAAGCAGCTTGTTGCTGCTTTTAGGTGGCGCTTTGGCCTTTTTCATGGTTTTGACAGAAT
ATGTCCTTGTTTCTGTGACTAGTGCTGTAACAGTGACTGTAGCAGGAATTGTGAAGGAAGCTGTCACTATTCTGGTTGCT
GTGCTATTCTTCAACGATCCATTTACATGGTTGAAGGCGCTTGGGCTAGCAATAATAATATTTGGTGTCAGTCTATTCAA
TATTTACAAGAAGCATGTGTTTATTTGTAATGCATGGAGAACATTGAGTAACGATTGTTTGTGCTACATGATGAAGGTAT
AA