
Microexon ID | Ta_7B:4315007-4315019:+ |
Species | Triticum Aestivum | Coordinates | 7B:4315007..4315019 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGATAGTTACG |
Microexon Amino Acid seq | KDSYG |
Microexon-tag DNA Seq | GCTGTTATGTCAGGATTCCGCTGGTCCATGACACAGATTCTATTGCAAAAAGATAGTTACGGCCTGAAAGATCCAATCACCCTGATGAGTCATGTTACTCCAGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKDSYGLKDPITLMSHVTPVM |
Microexon-tag spanning region | 4314812-4315678 |
Microexon-tag prediction score | 0.9554 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7B02G007800.1x |
Reference Transcript ID | TraesCS7B02G007800.1 |
Gene ID | TraesCS7B02G007800 |
Gene Name | NA |
Transcript ID | TraesCS7B02G007800.1 |
Protein ID | |
Gene ID | TraesCS7B02G007800 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 1.30E-19 |
Motif start | 87 |
Motif end | 331 |
Protein seq | >TraesCS7B02G007800.1 MPEADVLAAVTAAEVVSPRSGYFRQRSINTPDPDRKAFDVENPPGASVGATGVGAGGLGLRPSESVAKLESLERAERAAL APAVVLKTGFYILVWYTFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAALSKIILLFQAKGIDTAVEMSWKDYFMR VVPTALGTALDINLSNASLVFITVTFATMCKSASPIFLLLFAFAFRLESPSIKLLGIIVVISIGVLLTVARETAFDFWGF IFVTLAAVMSGFRWSMTQILLQKDSYGLKDPITLMSHVTPVMAIATMVLSLLLDPWSDFRKNTYFDNPWHVMRSFLLMLI GGSLAFFMQQVL* |
CDS seq | >TraesCS7B02G007800.1 ATGCCGGAGGCGGACGTGCTGGCCGCGGTGACCGCGGCGGAGGTGGTGTCCCCGCGATCCGGCTACTTCCGGCAGCGGAG CATAAACACCCCGGATCCGGACCGCAAGGCGTTCGACGTCGAGAACCCGCCGGGGGCCTCCGTGGGCGCCACCGGAGTCG GAGCAGGAGGGCTGGGGCTCCGGCCCAGCGAGTCCGTCGCCAAGCTGGAGTCGCTGGAGCGGGCGGAGCGCGCCGCCCTG GCGCCCGCGGTCGTGCTCAAGACGGGGTTCTACATCCTCGTCTGGTACACCTTCAGCACCTGCCTCACCCTATACAATAA GACGCTGCTGGGGGACAAGCTGGGCAAGTTCCCGGCGCCGCTGCTGATGAACACTGTGCACTTCGCGCTGCAGGCCGCGC TCTCCAAGATCATCCTGCTCTTCCAGGCCAAGGGGATCGACACCGCCGTCGAGATGAGCTGGAAGGATTACTTCATGAGA GTCGTCCCAACCGCTCTGGGAACCGCGCTCGACATAAACCTGAGCAACGCGTCTCTGGTGTTCATCACGGTCACGTTCGC CACTATGTGTAAATCGGCGTCGCCAATATTCCTTTTGCTATTCGCTTTTGCATTCCGGTTGGAGAGCCCCAGCATCAAGC TTCTAGGAATCATAGTTGTCATTTCCATTGGGGTTCTGTTGACAGTTGCCAGGGAAACTGCGTTTGACTTCTGGGGCTTC ATTTTTGTGACGCTTGCTGCTGTTATGTCAGGATTCCGCTGGTCCATGACACAGATTCTATTGCAAAAAGATAGTTACGG CCTGAAAGATCCAATCACCCTGATGAGTCATGTTACTCCAGTGATGGCCATAGCCACCATGGTACTATCTCTCCTGTTGG ATCCTTGGAGTGATTTTCGAAAGAACACGTATTTCGATAACCCATGGCACGTCATGCGCAGTTTCTTACTTATGCTAATC GGAGGGAGCTTGGCTTTTTTCATGCAACAAGTGCTATAA |
Ta_7B:4315007-4315019:+ does not have available information here.