
Microexon ID | Ta_3D:399297110-399297122:+ |
Species | Triticum Aestivum | Coordinates | 3D:399297110..399297122 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAGGAATATG |
Microexon Amino Acid seq | KEEYG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWCMTQILLQKEEYGLKNPFTLMSYVTPVM |
Microexon-tag spanning region | 399296901-399297488 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G289300.3x |
Reference Transcript ID | TraesCS3D02G289300.3 |
Gene ID | TraesCS3D02G289300 |
Gene Name | NA |
Transcript ID | TraesCS3D02G289300.3 |
Protein ID | |
Gene ID | TraesCS3D02G289300 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 1.70E-30 |
Motif start | 121 |
Motif end | 421 |
Protein seq | >TraesCS3D02G289300.3 MGDCAVENGHAHPKEEDAPEVPVEPAEGAAEPQVVAGGQRKQRGIRREPSFSRWCKDPSAAPNAPAGAASPASAPSDDDS EEFELPLLPPAAAAHRSPMDIEAGAAAGSDSVPVSPWLIAKIIFLIASWYTLSTCLTLYNKEMLGKRMWKFPAPFLMNTV HFTMQAVASRVIVWFQQRGMEAERNPMSWKDYFLRVVPTALATALDINLTNISFVFITVTFATMCKSGAPIFILLFAFLF RLEKPSFNILGIMLIVSVGVLLTVAKETQFNLWGFIFIMLAAVMSGFRWCMTQILLQKEEYGLKNPFTLMSYVTPVMAIT TAIISIAMDPWHEVRASHFFDSPAHILRSILLMLLGGALAFFMVLTEYVLVSVTSAVTVTIAGIVKEAVTILVAVLFFND PFTWLKGFGLATIIFGVSLFNLYKYHRFKKDRHSKHVDPNSHSSNGASKYVIIDDDIEDLDDTG* |
CDS seq | >TraesCS3D02G289300.3 ATGGGGGACTGCGCCGTGGAGAACGGCCACGCCCACCCGAAGGAAGAGGACGCGCCGGAAGTGCCCGTCGAGCCCGCGGA GGGCGCCGCGGAGCCGCAGGTGGTGGCTGGCGGGCAGAGGAAGCAGAGAGGGATACGCAGGGAGCCGTCGTTCTCGCGGT GGTGCAAGGACCCCTCCGCGGCGCCCAATGCCCCCGCCGGCGCCGCTTCGCCGGCCTCTGCACCGAGCGACGATGATTCG GAGGAGTTCGAGCTGCCGCTTCTGCCGCCCGCCGCCGCCGCCCATCGCTCGCCGATGGATATCGAGGCAGGAGCGGCGGC GGGATCTGACAGCGTCCCGGTCTCGCCGTGGCTGATCGCCAAGATTATATTTCTGATAGCGAGTTGGTACACGCTGAGCA CCTGCTTGACGCTGTATAACAAGGAGATGCTCGGGAAGCGCATGTGGAAGTTCCCTGCCCCGTTCCTGATGAACACGGTG CATTTCACAATGCAGGCTGTTGCGTCGAGGGTGATCGTGTGGTTCCAGCAACGGGGCATGGAGGCAGAGCGTAATCCAAT GTCATGGAAAGATTACTTTCTGCGAGTTGTTCCAACAGCTTTGGCTACTGCTCTTGATATAAATTTGACCAACATTTCGT TTGTTTTCATTACTGTGACATTCGCTACAATGTGTAAATCTGGGGCTCCAATTTTCATTCTTCTCTTTGCTTTTCTATTC AGGCTAGAGAAGCCGAGCTTTAACATTCTTGGAATCATGCTGATTGTTTCTGTTGGAGTTCTACTGACAGTTGCTAAAGA GACACAATTTAATCTTTGGGGATTTATATTTATTATGCTTGCTGCTGTCATGTCTGGTTTCCGCTGGTGCATGACACAGA TTCTCCTCCAGAAAGAGGAATATGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACA ACTGCGATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGATAGTCCAGCTCACATATT AAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATTCTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTTA CAAGTGCTGTAACAGTGACCATAGCTGGGATTGTCAAGGAAGCTGTCACAATTTTGGTTGCTGTGCTTTTCTTCAATGAT CCATTTACCTGGTTAAAGGGATTTGGACTTGCAACAATTATATTTGGTGTCAGCCTTTTCAATCTGTACAAGTATCATAG GTTCAAGAAAGACCGCCACAGCAAACATGTTGACCCAAATTCCCATTCCTCCAATGGTGCCTCAAAATATGTTATCATTG ATGATGATATTGAAGATCTGGATGATACAGGCTGA |
Ta_3D:399297110-399297122:+ does not have available information here.